Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00915 ATGGCAGCCATTCAGAAGATTGAAGATAGCTTGTGCCACACCCGAAATGATCCACTCAACTGGGGTGTGGCTGCCGAGTCTCTCAAGGGGAGCCATCTCGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCCTTGTCAAGCTCGGTGGTGAAACTCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTGATGGTCCAACTGGCCGAGTCTGCTAGAGCGGGCGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAAGGCACTGATAGCTATGGTGTCACTACTGGCTTTGGTGCTACCTCTCATAGAAGGACCAATCAAGGTGGCGCTCTTCAGAAGGAGCTGATTCGATTCTTGAATGCTGGGATCTTTGGAAGTGGAGCTGAGTCCACCCATACTCTGCCCCACTCCGCTACCAGGGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTATTCGGGCATTCGATTTGAGATTTTGGAAGCCATAACCAAACTCTTGAATTCTAACATCACTCCCTGCTTGCCTCTTCGTGGAACCATCACTGCTTCGGGTGATCTTGTTCCTCTTTCTTATATTGCTGGATTGCTCACCGGCCGACCCAACTCTAAGGCGGTTGGACCAAATGGAGAGAGCCTTAATGCTCAGGAGGCTTTTCGACAAGCTGATATTCCTTCTGGGTTCTTCGAGCTGCAGCCTAAAGAAGGTCTTGCTCTTCTCGAAGAACCCAGAAGGAATATCAGCTTGTCGAAAAGCCTCCTGAGCATTAAGGCTCTCTCCATTTGGTCCAACCGCCTTAGAGTTGGGTCGGCCGGTGAGCAATCCAGCAATATAAGAAAGAGGAACAAGATCACCCGAAGCAGTGATGGTTCCACGAAGAGGCAAGCAGGGAGTGATGTTAGAATTCAAGAGTTTGGTTATGGCTTCCAAAATCTCAAATCGAATGCCCGAATAGCCTTGAAGAAGAGTGTTGATTCTCACCAACATGGCCGCCCTGGTAGCGGAGTGGGGCAGAGTATGGGTGGACTCAGCTCCACTTCCAAAGATCCCAGCATTCAAGAATCGAATCAGCTCCTTCTGAAGAGCGCCACCTTGATTGGTCCTTCTATGAGAGGTAGCACCAAAGCCAGTAGTGACACCATAGCTATCAGTGCCTTTGTTCATGCTCTCCATAACCCAATCACTGCTAGCTTTAACGCCCGCTCTAGCAGACTCGGCCAGTTCGACCACCACATGGTTATCACGAGTGGCAATGGCAGCCACTTGGGAAATGGTGAGAGTTTCACCACCGAGCTTGACAAGGGGCCTCCGGTACTCCTCCACCATGCGCTTCACCTCGTCGAGATGGCTCCCCTTGAGAGCCTCGGCAGCCACACCCCAGTTGAGTGGATCATTAGTGCTGATGCAGAAGCTCTCCACGGAACCATTTTGGGGGGCAAGTTGTTGGAAGGGAGCGGGGGCCATTTGTAA 1503 51.63 MAAIQKIEDSLCHTRNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVMVQLAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALLEEPRRNISLSKSLLSIKALSIWSNRLRVGSAGEQSSNIRKRNKITRSSDGSTKRQAGSDVRIQEFGYGFQNLKSNARIALKKSVDSHQHGRPGSGVGQSMGGLSSTSKDPSIQESNQLLLKSATLIGPSMRGSTKASSDTIAISAFVHALHNPITASFNARSSRLGQFDHHMVITSGNGSHLGNGESFTTELDKGPPVLLHHALHLVEMAPLESLGSHTPVEWIISADAEALHGTILGGKLLEGSGGHL 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4339661 4342059 + CmaCh07G009150.1 Cma07g00915 298230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00915 500 MobiDBLite consensus disorder prediction 334 363 - -
Cma07g00915 500 SUPERFAMILY L-aspartase-like 17 251 IPR008948 GO:0003824
Cma07g00915 500 Gene3D - 9 252 IPR024083 -
Cma07g00915 500 MobiDBLite consensus disorder prediction 349 363 - -
Cma07g00915 500 MobiDBLite consensus disorder prediction 283 308 - -
Cma07g00915 500 Pfam Aromatic amino acid lyase 55 251 IPR001106 -
Cma07g00915 500 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 14 253 - -
Cma07g00915 500 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 190 206 IPR022313 GO:0016841
Cma07g00915 500 PANTHER HISTIDINE AMMONIA-LYASE 14 253 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00915 Cma-Chr7:4339661 Cma07g00920 Cma-Chr7:4385994 1.00E-168 dispersed
Cma07g00914 Cma-Chr7:4339646 Cma07g00915 Cma-Chr7:4339661 0 tandem
Cma07g00915 Cma-Chr7:4339661 Cma07g00916 Cma-Chr7:4346372 7.94E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00915 K10775 - csv:101218382 456.062