Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00926 | ATGTCGGCCGCCAAGGACTACCAAGACCCGCCTCCGACCCCATTGATCGACGTTGAAGAGTTTACTCAGTGGTCATTTTACAGAGCCATTATCGCTGAGTTCGTCGCCACGCTTCTGTTCTTGTACATTCTTGTTCTCACTGTGATTGGATCTTCCAAGTTGTCGGACACTGAAAGCCACTGCGGTGGGGTTGGCGTTTTGGGTATTTCCTGGGCTGTCGGTGGCATGATCTTCGTCCTTGTTTACTGTACGGCTGGAATTTCTGGAGGGCATATTAACCCGGCGGTGACGTTCGGGCTGTTATTGGCTCGAAAAATCTCTCTAATCAGAGCTGTTCTTTACATTATGGCTCAATGTTTGGGGGCCATTTGTGGGTGTGGGTTAGCTAAATCGTTTCAGAAGGGTTATTACGTTCGGTTCAAAGGTGGAGCCAATATGCTCTCCGATGAGTACAGCATCGGCACCGGCTTAGCCGCAGAGATCATCGGGACTTTTGTTCTTGTTTACACTGTCTTCTCTGCCACAGACCCCAAGAGAAACGCTAGAGATTCTCACGTCCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCAGTGTTTATGGTTCATCTAGCCACTATTCCGATCACCGGCACCGGCATAAACCCAGCTCGAAGCTTAGGAGCTGCAGTGATCTATAACGAAGCTGAAGCCTGGGATCACCATTGGATCTTTTGGGTTGGGCCCTTCATTGGAGCTGCCATTGCTACCATTTATCATCAAGTCATAATAAGAGCAGGGGCAGTCAAAGCACTGGGCTCTTTCAGAAGTTCCTCCGCCGTATAA | 822 | 49.76 | MSAAKDYQDPPPTPLIDVEEFTQWSFYRAIIAEFVATLLFLYILVLTVIGSSKLSDTESHCGGVGVLGISWAVGGMIFVLVYCTAGISGGHINPAVTFGLLLARKISLIRAVLYIMAQCLGAICGCGLAKSFQKGYYVRFKGGANMLSDEYSIGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNEAEAWDHHWIFWVGPFIGAAIATIYHQVIIRAGAVKALGSFRSSSAV | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4445014 | 4446837 | - | CmaCh07G009260.1 | Cma07g00926 | 298241 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 28 | 47 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 73 | 97 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 110 | 129 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 159 | 177 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 195 | 217 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PRINTS | Major intrinsic protein family signature | 235 | 255 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | Gene3D | Glycerol uptake facilitator protein. | 13 | 273 | IPR023271 | - | |
Cma07g00926 | 273 | PANTHER | PLASMAMEMBRANE INTRINSIC PROTEIN 25 | 3 | 270 | - | - | |
Cma07g00926 | 273 | ProSitePatterns | MIP family signature. | 91 | 99 | IPR022357 | - | |
Cma07g00926 | 273 | Pfam | Major intrinsic protein | 21 | 252 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 3 | 270 | IPR034294 | - | |
Cma07g00926 | 273 | SUPERFAMILY | Aquaporin-like | 20 | 257 | IPR023271 | - | |
Cma07g00926 | 273 | CDD | MIP | 28 | 255 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00926 | 273 | TIGRFAM | MIP: MIP family channel proteins | 32 | 251 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma07g00926 | Cma-Chr7:4445014 | Cma04g01369 | Cma-Chr4:7014589 | 1.32E-151 | dispersed | |
Cma07g00926 | Cma-Chr7:4445014 | Cma07g00928 | Cma-Chr7:4452094 | 5.37E-163 | proximal | |
Cma02g00891 | Cma-Chr2:5289215 | Cma07g00926 | Cma-Chr7:4445014 | 1.74E-161 | wgd | |
Cma20g00484 | Cma-Chr20:2339049 | Cma07g00926 | Cma-Chr7:4445014 | 7.96E-161 | wgd | |
Cma03g01239 | Cma-Chr3:8200297 | Cma07g00926 | Cma-Chr7:4445014 | 1.29E-171 | wgd | |
Cma04g02577 | Cma-Chr4:17684866 | Cma07g00926 | Cma-Chr7:4445014 | 8.48E-155 | wgd | |
Cma06g00375 | Cma-Chr6:1736779 | Cma07g00926 | Cma-Chr7:4445014 | 8.60E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00926 | K09872 | - | csv:101215604 | 477.248 |