Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00928 | ATGGCCAAGGATTCTGAAGCTGGAGGATTCGCCGCCAAGGACTACCACGACCCACCTCCGGCGCCGTTGATCGACGTCGAGGAGTTCACTCAGTGGTCATTCTACAGAGCCATCATTGCCGAGTTCATCGCCACGCTTCTGTTCTTGTACGTTACTGTTCTCACTGTCATTGGCTACAGCAGCCAGTCCGACGTCGACCACGGGGGCCATATCTGCGGCGGGGTCGGCATTCTCGGCATCGCTTGGGCCTTTGGTGGAATGATCTTCGTTCTTGTTTACTGCACCGCTGGGATTTCCGGTGGGCATATCAATCCGGCGGTGACATTTGGGTTGTTTTTGGCTCGGAAAGTGTCGTTGGTGAGGGCCGTTTTGTATATGGTGGCTCAGTGTGTTGGAGCCATTTGTGGATGTGCGTTGGTCAAATCGTTTCAGAAGGGTCTCTACAATCGCTACGGCGGTGGAGCCAATTCGCTAGCCGAAGGTTACAGTACCGGCACCGGCTTAGCCGCTGAGATTATCGGAACCTTCGTTCTTGTCTACACTGTCTTCTCTGCTACAGATCCCAAGAGAAGCGCTAGAGATTCTCACATTCCTGTACTAGCACCACTCCCAATTGGGTTCGCCGTGTTCATGGTTCACCTGGCCACCATTCCGATCACCGGCACCGGTATTAACCCAGCTCGAAGCTTCGGCGCTGCAGTGGTGTTCAACCACAGCAAGCCCTGGAATGACCATTGGATTTTCTGGGTTGGGCCCTTCATTGGAGCTCTCATTGCTGCGTTTTATCACCAGTTCATATTGAGAGCTGGAGCAGTTAAAGCTCTGGGATCCTTCAGGAGTACCCACAGTGTCTAA | 855 | 53.45 | MAKDSEAGGFAAKDYHDPPPAPLIDVEEFTQWSFYRAIIAEFIATLLFLYVTVLTVIGYSSQSDVDHGGHICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMVAQCVGAICGCALVKSFQKGLYNRYGGGANSLAEGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVVFNHSKPWNDHWIFWVGPFIGALIAAFYHQFILRAGAVKALGSFRSTHSV | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4452094 | 4454055 | + | CmaCh07G009280.1 | Cma07g00928 | 298243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00928 | 284 | Gene3D | Glycerol uptake facilitator protein. | 21 | 284 | IPR023271 | - | |
Cma07g00928 | 284 | CDD | MIP | 36 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - | |
Cma07g00928 | 284 | Pfam | Major intrinsic protein | 29 | 263 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 36 | 55 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 170 | 188 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PRINTS | Major intrinsic protein family signature | 246 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PANTHER | AQUAPORIN PIP2-4-RELATED | 6 | 281 | - | - | |
Cma07g00928 | 284 | SUPERFAMILY | Aquaporin-like | 28 | 268 | IPR023271 | - | |
Cma07g00928 | 284 | TIGRFAM | MIP: MIP family channel proteins | 40 | 263 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma07g00928 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 6 | 281 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g01239 | Cma-Chr3:8200297 | Cma07g00928 | Cma-Chr7:4452094 | 4.46E-159 | dispersed | |
Cma03g01240 | Cma-Chr3:8202908 | Cma07g00928 | Cma-Chr7:4452094 | 0 | dispersed | |
Cma04g01369 | Cma-Chr4:7014589 | Cma07g00928 | Cma-Chr7:4452094 | 7.12E-175 | dispersed | |
Cma04g02577 | Cma-Chr4:17684866 | Cma07g00928 | Cma-Chr7:4452094 | 1.24E-170 | dispersed | |
Cma07g00928 | Cma-Chr7:4452094 | Cma20g00484 | Cma-Chr20:2339049 | 3.49E-168 | dispersed | |
Cma11g01375 | Cma-Chr11:9078606 | Cma07g00928 | Cma-Chr7:4452094 | 1.77E-157 | dispersed | |
Cma07g00926 | Cma-Chr7:4445014 | Cma07g00928 | Cma-Chr7:4452094 | 5.37E-163 | proximal | |
Cma15g00457 | Cma-Chr15:2035913 | Cma07g00928 | Cma-Chr7:4452094 | 1.03E-08 | wgd | |
Cma18g00891 | Cma-Chr18:7695873 | Cma07g00928 | Cma-Chr7:4452094 | 2.56E-155 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00928 | K09872 | - | csv:101214884 | 541.576 |