Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00931 ATGAAGTTTCGATCTCTTCTTTCTACTTGTTGTTCTTCTCGATCGCTTAATGCTATGGAAAATAGCCGGCACGATAGACAAGATAATGAGGGGTTTCGTGTGTACTCTTACAACGAGCTTAAATCGGCCACCAATGGATTTAGTGCGGCAAATAAGGTGGGAGAGGGCGGATTCGGCTCCGTTTACAAGGGTCGGCTTCATGATGGCAGGAAGATTGCTGTGAAGGTGCTCTCTGTTGAGGTTGAATCTATGAGAGGTGAAAGGGAATTCATTGCTGAATTGACTTCACTTTCTAATATCAGACATGAAAACCTTGTTGTGCTTAAAGGGTTTCATGTTGATGGATGTCAAAGATACTTGGTCTATGATTACATGGAAAACAACAGCCTTGCTCATGCTCTTCAGGGTGTGGGGGAAAATAGAATGAGACTTAGTTGGCAATCCAGAAAGGACATTTTGATTGGAGTAGCTCGTGGGCTTGCCTATCTTCATGAGGAAGTCAACCCGCATATAGTTCATAGAGATATAAAAGCTAGCAATATTCTTCTCGACCATAATTTTATGCCTAAACTTGCGGATTTTGGATTGGCGAAGTTGTTTGGAGAGAACCTTTCTCATGTTAGTACTCGTGTTGCTGGCACAATCGGATATCTTGCTCCTGAATATGCTGTTAGCGGGCATTTGACACGAAAATCAGATGTCTATAGCTTCGGAGTGTTGTTGTTGGAGATTGTCAGTGGGAGAGCAACTGTTGATTTCGATATGGAACGTGGTGAACACCACTTGGTTCAGAAGGTATGGGATCACTACAACACGAACGAGCTAGTAAAATTGATAGACCCGACACTTGACACGAACATCCGGGAAGAAGAGGCTGTTCAGTTTATGAAAATTGGCCTACTGTGTGTGCAAGAAAACACAACGAAACGACCGCGAATGTCTGTTGCTGTAAGTATGTTGATGAGGGAGACCGACGTTAAAGATCATAAGATTTCACAACCAGGACATATTATTGACTTCATGGACATTAAGATGGATAAAGGAACTTCATCAACCAGTATTTTCTCAAAGGTTTCAACACCAAATAGCATGTAA 1095 42.19 MKFRSLLSTCCSSRSLNAMENSRHDRQDNEGFRVYSYNELKSATNGFSAANKVGEGGFGSVYKGRLHDGRKIAVKVLSVEVESMRGEREFIAELTSLSNIRHENLVVLKGFHVDGCQRYLVYDYMENNSLAHALQGVGENRMRLSWQSRKDILIGVARGLAYLHEEVNPHIVHRDIKASNILLDHNFMPKLADFGLAKLFGENLSHVSTRVAGTIGYLAPEYAVSGHLTRKSDVYSFGVLLLEIVSGRATVDFDMERGEHHLVQKVWDHYNTNELVKLIDPTLDTNIREEEAVQFMKIGLLCVQENTTKRPRMSVAVSMLMRETDVKDHKISQPGHIIDFMDIKMDKGTSSTSIFSKVSTPNSM 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4471466 4473776 - CmaCh07G009310.1 Cma07g00931 298246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00931 364 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Cma07g00931 364 PANTHER RECEPTOR-LIKE KINASE 17 342 - -
Cma07g00931 364 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Cma07g00931 364 SMART serkin_6 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00931 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Cma07g00931 364 SUPERFAMILY Protein kinase-like (PK-like) 31 327 IPR011009 -
Cma07g00931 364 Pfam Protein kinase domain 49 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00931 364 Gene3D Transferase(Phosphotransferase) domain 1 125 340 - -
Cma07g00931 364 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 342 - -
Cma07g00931 364 ProSiteProfiles Protein kinase domain profile. 47 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00931 364 CDD STKc_IRAK 53 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00931 Cma-Chr7:4471466 Cma16g00467 Cma-Chr16:2360646 2.88E-118 dispersed
Cma07g00931 Cma-Chr7:4471466 Cma04g00629 Cma-Chr4:3229856 1.14E-125 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68709 PF00069 Pkinase 1.00E-49 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00931 - - mcha:111013547 605.134