Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00937 ATGGGAAAGAAAGAAACATGGTTTTCTTCTGTAAAGAAGGCTCTAAGTCCAGATCCCAAAGAGAAGAAAGATCAGCAAAACTCGAAGAAATCGAAGAAGAAATGGTTTGGAAAGCAAAAGCATTGCTATCCAGATTCTACACAGGCTGTGGCTGAGCCATCACCACCGCCCCAGCAAGAAGAGGCACATATAGTTCATTCAGTGAGTGAAGAACACAATGAGCCTTGCTCTGTTGAAGTTGCTACTGCAACAGAAGTGACTTCTGCAGCTGCTCAGGCTAATGAAGCAAGTGTTTCTACTTTTGAGCCTAATGTTGCTACTCCGTTTGTTGCTGCCAAAGTTGTGCACGTCGCGACGGAGACACGATTTGTTGGACTATCTAAGGAGGAAGTTGCAGCAATCAAGATCCAAACAGTGTTTCGTGGATACCTTGCAAGGAGGGCGTTACGGGCATTACGAGGATTGGTGAGGCTGAAATCATTGATGGAGAGTTCTACTGTGAAACGACAAGCCTCGAACACGCTTCGGTGTATGCAGACGTTGGCTCGTGTTCAATCTCAGGTTCATTTTAGGAGGGTTAGGATGTTGGAGGAGAATCAAGCTCTACAGAAACAACTCCTTCAAAAGCATGCGAAAGAGCTCGAGAGCTTGCGGATTGGGGAGGAATGGGATGACAGTTTACAATCAAAGGAGCAGATTGAAGCTGGTCTAATGAGCAAATATGAGGCTGCAATGAGAAGGGAGAGAGCCCTGGCATATGCCTTCACTCATCAGCAAACCTGGAAGAACTCTGCAAAGTCTGTAAACCCAGCATTCATGGATCCAAGTAATCCCACCTGGGGTTGGAGCTGGTCGGAGCGATGGAGCGGAGCTCGAGTACATGATGCACCTGACCTGACAGGAAAAGAGTCAAACACCAGTCATTCCGGTAAGAAGACGACGAGTCGTGGCATTGTTGGCGGAGAAATCAGCAAATCATTCGCTCGATTTCAGCTGAACTCAGAGATGGATTCCCCAACAGGCAGCCAGAAAACAACTCACTCTGCTTTCCAACCCTCCTCAACTCCTTCCAAGCTAGCTTCATCTCCTAAAGTAAAAAAAATGAAGCCTCCAAGCCCAAGAATCCTCATGCTTCACGACGACGACTCGAAAAGTATGGTCAGCAGTATGCAGTCCGAAAGATCACGAAGGCACAGCACAGGAGGAGGAGGACCTTCGGCAAGGGACGACGATAACATGTCAACCACGAGTGCCGTTCGGAGTTACATGACACCAACTGAATCAGCAAGAGCAAAATCCAGATTGCAGAGTTCATTAGGAACTCCAGAGAAAGGATCTTCAGCAACAGCAAAGAAACGTCTCTCGTACCCTCCTTCACCCGCCTTGGCAAGACGACATTCAGGTCCGCCCAAGCTCGAAGGCGACGTCGATATCGGAAACAGCATCATCAATGGAGTTGGTGGCTAA 1467 47.99 MGKKETWFSSVKKALSPDPKEKKDQQNSKKSKKKWFGKQKHCYPDSTQAVAEPSPPPQQEEAHIVHSVSEEHNEPCSVEVATATEVTSAAAQANEASVSTFEPNVATPFVAAKVVHVATETRFVGLSKEEVAAIKIQTVFRGYLARRALRALRGLVRLKSLMESSTVKRQASNTLRCMQTLARVQSQVHFRRVRMLEENQALQKQLLQKHAKELESLRIGEEWDDSLQSKEQIEAGLMSKYEAAMRRERALAYAFTHQQTWKNSAKSVNPAFMDPSNPTWGWSWSERWSGARVHDAPDLTGKESNTSHSGKKTTSRGIVGGEISKSFARFQLNSEMDSPTGSQKTTHSAFQPSSTPSKLASSPKVKKMKPPSPRILMLHDDDSKSMVSSMQSERSRRHSTGGGGPSARDDDNMSTTSAVRSYMTPTESARAKSRLQSSLGTPEKGSSATAKKRLSYPPSPALARRHSGPPKLEGDVDIGNSIINGVGG 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4504725 4508670 + CmaCh07G009370.1 Cma07g00937 298252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00937 488 MobiDBLite consensus disorder prediction 384 399 - -
Cma07g00937 488 MobiDBLite consensus disorder prediction 295 322 - -
Cma07g00937 488 PANTHER IQ-DOMAIN 5-RELATED 1 481 - -
Cma07g00937 488 MobiDBLite consensus disorder prediction 15 31 - -
Cma07g00937 488 Gene3D - 118 155 - -
Cma07g00937 488 MobiDBLite consensus disorder prediction 1 60 - -
Cma07g00937 488 MobiDBLite consensus disorder prediction 409 445 - -
Cma07g00937 488 MobiDBLite consensus disorder prediction 335 361 - -
Cma07g00937 488 Pfam IQ calmodulin-binding motif 132 150 IPR000048 GO:0005515
Cma07g00937 488 MobiDBLite consensus disorder prediction 335 488 - -
Cma07g00937 488 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 481 - -
Cma07g00937 488 SMART iq_5 128 150 IPR000048 GO:0005515
Cma07g00937 488 ProSiteProfiles IQ motif profile. 129 157 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00359 Cma07g00937 CCT
Cma06g00359 Cma07g00937 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01355 Cma-Chr4:6912495 Cma07g00937 Cma-Chr7:4504725 5.52E-64 dispersed
Cma07g00937 Cma-Chr7:4504725 Cma10g00857 Cma-Chr10:4163007 1.88E-42 dispersed
Cma15g00434 Cma-Chr15:1943695 Cma07g00937 Cma-Chr7:4504725 2.03E-123 wgd
Cma18g00883 Cma-Chr18:7634836 Cma07g00937 Cma-Chr7:4504725 2.11E-49 wgd
Cma03g01253 Cma-Chr3:8249643 Cma07g00937 Cma-Chr7:4504725 0 wgd
Cma04g02600 Cma-Chr4:17780558 Cma07g00937 Cma-Chr7:4504725 9.43E-127 wgd
Cma06g00359 Cma-Chr6:1669757 Cma07g00937 Cma-Chr7:4504725 6.12E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00937 - - csv:101203393 734.561