Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00971 ATGAAAGTGAACATAACCTCCATTAAAACCGCCTCTAACGGCGTCTGGCAAGGCGACAACCCCCTCAATTTCGCCTTCCCTCTCTTAATCCTTCAATCTGTTTTAATCCTCCTCCTCACGCGCCTCCTCGCCGCCATCCTCAAGCCCCTCCGCCAGCCCAAAGTCATCGCCGAAATCCTCGGCGGGATTCTTCTGGGTCCCTCTGTTTTTGGTCGGAATCAAGCTTATTTGAACTGGGTTTTTCCGGATTGGAGTACACAGATTCTTGAAACGGTTGCTAGTATTGGGTTGTTGTTCTTTTTGTTTTTGGTTGGATTGGAACTCGATTTGTCCTCTGTTCGCCGTAGCGGGCGGCGGGCTTTTGGAATCGCCGTCGCTGGAATCGCCGTCCCTTTCCTCTCTGGCACCGGTGTCGCCTTTGTACTCCGTAAAACCGTCGACGGTGCCGATAACGTCGGGTACTGGCAATTTGTTGTGTTCATCGGCGTTGCTCTGTCCATTACTGCTTTTCCTGTTCTGACGCGCATTTTAGCGGAGCTTAAGCTTCTCACCACCGAAGTCGGCGAGATTGCCATGGCGGCCGCCGCATTTAACGACATGGCTGCTTGGATTCTCCTCGCACTCGCCATTGCTCTAACGGGCAACGATAACTCTGTTACAGTACAGAGAAGTTCGTTAGTTTCCGTGTGGGTCCTACTCTCTGGAGCTGGATTTGTCGTTTTCATGATGACGGTGGTCCGACCAGGAATGAAGTGGGTTGGACAGCGGTGTTCGTACGAGGATGACGCGGTCGAGGAGGGGTATGTCTGTTTGACGTTGATCGGAGTGTTGGTTTGTGGGTTTGTGACCGATTTGATCGGAATTCATTCGATTTTCGGGGGTTTTGTGTTTGGATTGACGGTGGCGAAGGAGGGGAGATTTGCGGAGAGATTGATCGAGAGGATTGAGGATTTCGTGTCGGGGCTTCTCCTTCCTCTGTATTTTGCGTCGAGTGGGTTGAAGACGAATGTGACGAAGATCAACGGCGGAAAATCATGGGGGCTGCTGGCGCTGGTTATTTCCACGGCGTGTGCAGGGAAGATTCTGGCGACGTTTGCGGCGGCGATGGCGTTTTTCATGCCGGCGAGGGAGGCGATGGCTTTGGGATTGCTTATGAACACTAAAGGCTTGGTGGAACTCATCGTGCTCAATATTGGGAAGGAGAAAAAGGTTCTCAACGAAGAAGTATTCGCCATATTAGTGTTAATGGCACTATTCACAACATTCATCACCACCCCCACCGTGATGGCAATCTACAAGCCAGCCCGCGCCGCCGCCGCCACCCAAACCCACCGCAAACTCCGCCACCTCTCCGCCGCCGGGAACTCCACCAAGGACAGGTCACTAACAATCCTAGCCTGCCTCCACAGCTTAGGCAACGTACCTGCCCTCATCAGCCTGACCGAGTCAACTCGCAGCACCAAAACCTCGTCCCTCAAACTCTTCGTCATGCACCTCGTCGAACTCACCGAGCGCTCCTCCTCAATCCTAATGGCACAACGCGCCCGCAAGAACGGCTTCCCTTTCTTTGCCAGGTTCCGCAAGGCCAGCGAGTGGCACGACCAGATGGCCGCCGCCTTCCAGGCCTATATCCAGTTGGGCCGGGTCAAGGTCCGGCCCACCACAGCGGTCTCTTCCTTGACCACAATGCACGAGGACATCTGCGGCGTGGCGGACGATAAGAGAGTGGCGATGATCATCTTGCCGTTTCATCGGAATTGGAGGACGGTCAGCGGCGTGGAGGAGAATATGGGCCATGGGTGGAGAGTTGTGAACCAGCGGGTGCTGAAGAGTGCGCCTTGCTCGGTGGCGGTTCTTGTGGACCGGGGGTTAGGAGCGGTGGTTGGTGCGGCACAGAGGATTTGTGTGATGTTTTTTGGTGGTCCTGATGACCGAGAGGCGCTGGAATTGGGTGGACGGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTGAGGTTTCGGGCGTCGCCGCCGTCGGATGGAGTGGAGGGTAGTAAGGTCATTTCGCGACATATGTATTCTAAATCTAGCGACAGTCATTATAGCTTCTCCACTGCTCCAATAAACTGGGAAAAAGAAAAGGTGCTAGATGAAGCAGCAATAGCAGAATTCAGAGCTAAATGGGATGCAACAGCTGAGTACACAGAAAAGGAAGCCACCGACACGAACACGATAGTTGAAGGGGTGGTCGGGATCGGAAAGGAAGGCGGTTTCGACCTAATTGTGGTCGGGAAGGGTCGGGTTCCGTCAAGAATGGTGGCAAAACTAGCAGACCGGGCAGCGGAGCACTCGGAGTTAGGGCCGGTCGGGGACATATTGAGCAGCTCCGGCAGGGGAATAGTATCTTCAATTCTAGTAATTCAACAACACGAAGAAGAAGAAACTCCAGCATTGAATAAGCAGTCTTTCTCAATCAGAGGAGCTTCCATTAATGTATAA 2481 53.69 MKVNITSIKTASNGVWQGDNPLNFAFPLLILQSVLILLLTRLLAAILKPLRQPKVIAEILGGILLGPSVFGRNQAYLNWVFPDWSTQILETVASIGLLFFLFLVGLELDLSSVRRSGRRAFGIAVAGIAVPFLSGTGVAFVLRKTVDGADNVGYWQFVVFIGVALSITAFPVLTRILAELKLLTTEVGEIAMAAAAFNDMAAWILLALAIALTGNDNSVTVQRSSLVSVWVLLSGAGFVVFMMTVVRPGMKWVGQRCSYEDDAVEEGYVCLTLIGVLVCGFVTDLIGIHSIFGGFVFGLTVAKEGRFAERLIERIEDFVSGLLLPLYFASSGLKTNVTKINGGKSWGLLALVISTACAGKILATFAAAMAFFMPAREAMALGLLMNTKGLVELIVLNIGKEKKVLNEEVFAILVLMALFTTFITTPTVMAIYKPARAAAATQTHRKLRHLSAAGNSTKDRSLTILACLHSLGNVPALISLTESTRSTKTSSLKLFVMHLVELTERSSSILMAQRARKNGFPFFARFRKASEWHDQMAAAFQAYIQLGRVKVRPTTAVSSLTTMHEDICGVADDKRVAMIILPFHRNWRTVSGVEENMGHGWRVVNQRVLKSAPCSVAVLVDRGLGAVVGAAQRICVMFFGGPDDREALELGGRMAEHPAVKVTVVRFRASPPSDGVEGSKVISRHMYSKSSDSHYSFSTAPINWEKEKVLDEAAIAEFRAKWDATAEYTEKEATDTNTIVEGVVGIGKEGGFDLIVVGKGRVPSRMVAKLADRAAEHSELGPVGDILSSSGRGIVSSILVIQQHEEEETPALNKQSFSIRGASINV 826
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 4697257 4701047 - CmaCh07G009710.1 Cma07g00971 298286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00971 826 Pfam Sodium/hydrogen exchanger family 35 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cma07g00971 826 Gene3D - 480 780 - -
Cma07g00971 826 PANTHER CATION/H + ANTIPORTER 3 810 - -
Cma07g00971 826 PANTHER BNAC06G14930D PROTEIN 3 810 - -
Cma07g00971 826 Gene3D - 28 441 IPR038770 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00971 Cma-Chr7:4697257 Cma16g00569 Cma-Chr16:2931153 0 dispersed
Cma03g00436 Cma-Chr3:4586936 Cma07g00971 Cma-Chr7:4697257 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00971 - - cmo:103490056 1194.49