Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00994 ATGGCGATCTCTGGGTTTCGAGCTCTTCTAAGGTGGAGCAAATGGTCCAAGAAAGAGTGGGCGATTGCAGTCATCTCTTTCGCTTTTATCGTTTCTGTTTTTTCTTTCCTCTCCGACTCTTGGCATGCTGAAGACGCTGGCATCAACCACACTTTCGATCTCAATCCCGCCAATGACCCTGATTTGGTTGACCTATCTCTGCTACAGAATGCCAAAGCAAAAGGCGCTCTATGCCTTGATGGGAGTTTGCCTGGATACCATTTTCAGAAGGGGTTCGGATCTGGTAATAGGAACTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCGATTCGGTCTCGTCCTGTTCTTTGCGTAAAATGACCCCGTTGGGTTCGTCAGCCTACATGGATCGCCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAGATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAGGATGAAACAAAGAATGGGAATAGACTTTATTTCAGAGGACAGCTCATCTGGGAAGCGCTTATGGAGGAACTCTTATCTGTTGGCTTGTCAAACGCAAGGCAGGCTCTTCTCTCAGGGTGCTCTGCTGGGGGATTGGCGACCCTTATACATTGTGATGACTTCAGAGAGCTTCTGCCGAAGGATGCAACTGTCAAATGTCTAGCTGATGCTGGATTTTTCCTTGACGAGAAAGATGTTTGGGGAAATCATACTATGAGATCTTTCTATCACGATGTTTTCAACCTTCAGAACACTGCTAAAAGCTTATCCAAGGATTGTACAGCAACAGAGGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATCAGCACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAAAATGTCTTGGTACCAAATCCATTACATCCTGCTGGCGCTTGGGAGAAATGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGTTTCCGGGACTCTTTGCTGAAGGCACTGAAGGACTTCAAGCACAGCAAGGAAGGAGGGCTTTTCGTAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAAGACTATAGCAGAGGCCGTTGGTGATTGGTACTTCAAACGAAATTCAGTGAAGTTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTCAGCTGA 1290 44.57 MAISGFRALLRWSKWSKKEWAIAVISFAFIVSVFSFLSDSWHAEDAGINHTFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGNRNWVLHIEGGGWCDSVSSCSLRKMTPLGSSAYMDRRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEDETKNGNRLYFRGQLIWEALMEELLSVGLSNARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADAGFFLDEKDVWGNHTMRSFYHDVFNLQNTAKSLSKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQNVLVPNPLHPAGAWEKCRLNIHKCDHAQLEILQGFRDSLLKALKDFKHSKEGGLFVNSCFIHCQTWMSETWHSPNSPRINKKTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFS 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5119967 5125168 + CmaCh07G009940.1 Cma07g00994 298309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00994 429 PANTHER NOTUM-RELATED 13 424 IPR004963 GO:0016787
Cma07g00994 429 Pfam Pectinacetylesterase 60 409 IPR004963 GO:0016787
Cma07g00994 429 PANTHER PECTIN ACETYLESTERASE 4 13 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00994 Cma-Chr7:5119967 Cma11g01184 Cma-Chr11:6960985 3.24E-149 dispersed
Cma07g00994 Cma-Chr7:5119967 Cma16g00121 Cma-Chr16:561081 1.35E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00994 K19882 - csv:101206380 805.053