Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01005 ATGGCGGCGATCCTTATTTTCATGGTAATTCTTTCAATACCCATTTTTTTAGCTTCTGGAGCTTCTGGAGATCTCAGCTTCACCTTCAATGGCTTCCGCTCCGGCGATCTCATCCTTGACGGCGTCGCCGAAATAACCTCCAATGGCGTTTTGAAGCTAACCAACGACGTCGATCAACAAATTGGCCATGCTTTTTACCCCAATTCCGTTTCCTTCAAGAACCAATCAACGAATTCCTCTGTTTTCTCCTTCTCTGCAACGTTCGTCTTCGCCATAAAATCTGAATATCATGATCTCGCCGGCCATGGAATTGCCTTCGTTGTTTCACCGTCGAGAGGTCTTCCCGGTGCTCGGCCGAGCGAGAGCCTCGGTTTGTTCAATGAGTCCAACAATGGGAACGAAACAAATCATATCTTCGCCATTGAACTTGACACGATACAGAATCTAGACCTTAAAGATATCAACAGAAACCATGTCGGAATCAACATTAACGGACTTGTGTCGGAACGGGCGGCGCCGGCTGGGTATTGGGACGACGGTGAATTTAAGAATTTGACGTTAATTAGTGGCGAATTGATGCAAGTTTGGGTTGAATACGATGGGATTGATAAACGAATTGATGTTACTATGGCTCCAATTGAGATAATCCATAAACCCAAAATTCCGCTTTTGTCTTTCCGGCGGGATTTGTCGTCAGTCATCAACGAAATCATGTTCGTCGGATTCTCGTCGTCGACTGGCTCCATTACGACGGCGCATTACGTTCTGGGTTGGAGCTTCAAAATCAATGGCGAAGTCCCGAGGCTTGCTCTGTCTCAACTGCCGGAGCTTCCACCTCGGTCGGGGAAAAAACAGAGATCCAAATTTCTGACGGTGGGGTTGCCGTTGATTTGCAGTTCAGTAGTTTTAACGACGGTTTTAGGTGCAGTTTTCTTGATTCATCGGCGGCGGAAATTCGCAGAGGTTTTAGAGGATTGGGAGCTGGAATATGGACCCCAAAGATTCAAATACAAGGATCTATACATAGCCACAAAGGGATTTAGAGAAAAAGAATTTCTGGGTTTTGGAGGATTCGGTCGAGTTTACAAAGGGGTTTTACCAAATTCAAAAATTGAAGTCGCTGTAAAGAAGATATCTCATGAATCAAGACAGGGGATGAAGGAATTCGTGGCGGAGATAGTGAGTGTAGGGCGTCTCCGGCACCGGAACCTGGTGGCGCTGCTGGGGTACTGCCGGCGGAGAGAAAATCTGTTTTTAGTGTATGAATATATGCCGAATGGAAGCTTGGACACATATTTACACGACTGGCCGGAAGTCACAATCAATTGGGAGCAGAGGTTTGAGATAATAAAAGGGGTTGCGTCGGGGCTGTTTTATCTACATGAACAGTGCGAACAGGTAGTGATTCATAGAGATGTGAAGGCTAGCAATGTGCTGCTTGATGCAGAATTCAATGGCAGATTGGGGGACTTTGGTTTGGCTAAAATGCACGACCGTGGCGCCGATCCTCGAACCACCCATGTCGTTGGGACTCTTGGGTATCTAGCGCCAGAGCACATAAGAACAGGGAGAGCCACAACAAGAACAGACGTGTACGCATTTGGAGCGTTTCTTCTGGAAGTGGGCTGCGGGAGAAGGCCAATCCACCAGCAAGATGAAGCGGATGATTTCATATTAATGGATTGGGTTTTCTCCTGTTGGTCTAATGGCGACATTCTCAGAACCGCCGACCCAAAACTGGGAGGAAATTTCGACCCTTCACAGCTCGAATTGGTTCTTAAACTTGGGTTGCTCTGTTCTCATTCCTCGCCGGCGGTTCGCCCCACCATGCGCCAGGTTTTGCAGTATTTGGAGGCTGATGCGCCGCTGCCGGAGCTCGCAACGCTCCGGTGGCGGCTCTCTGGTAATGTGTTCTTGAATTTGAGGCGGCGTAATGGGGGTAGTATCGGCGATGGCGATGGATTGGATGATTTTTCGATGTCTTATCCGGTGTCGACGGAGAGGAATGTGACGAGTTCGTCGTCGGTGGCGGAGTCTGTTCTTTCGGAAGGCCGATGA 2058 48.3 MAAILIFMVILSIPIFLASGASGDLSFTFNGFRSGDLILDGVAEITSNGVLKLTNDVDQQIGHAFYPNSVSFKNQSTNSSVFSFSATFVFAIKSEYHDLAGHGIAFVVSPSRGLPGARPSESLGLFNESNNGNETNHIFAIELDTIQNLDLKDINRNHVGININGLVSERAAPAGYWDDGEFKNLTLISGELMQVWVEYDGIDKRIDVTMAPIEIIHKPKIPLLSFRRDLSSVINEIMFVGFSSSTGSITTAHYVLGWSFKINGEVPRLALSQLPELPPRSGKKQRSKFLTVGLPLICSSVVLTTVLGAVFLIHRRRKFAEVLEDWELEYGPQRFKYKDLYIATKGFREKEFLGFGGFGRVYKGVLPNSKIEVAVKKISHESRQGMKEFVAEIVSVGRLRHRNLVALLGYCRRRENLFLVYEYMPNGSLDTYLHDWPEVTINWEQRFEIIKGVASGLFYLHEQCEQVVIHRDVKASNVLLDAEFNGRLGDFGLAKMHDRGADPRTTHVVGTLGYLAPEHIRTGRATTRTDVYAFGAFLLEVGCGRRPIHQQDEADDFILMDWVFSCWSNGDILRTADPKLGGNFDPSQLELVLKLGLLCSHSSPAVRPTMRQVLQYLEADAPLPELATLRWRLSGNVFLNLRRRNGGSIGDGDGLDDFSMSYPVSTERNVTSSSSVAESVLSEGR 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5205608 5207665 - CmaCh07G010050.1 Cma07g01005 298320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01005 685 Pfam Protein kinase domain 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01005 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 11 638 - -
Cma07g01005 685 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Cma07g01005 685 SUPERFAMILY Protein kinase-like (PK-like) 328 623 IPR011009 -
Cma07g01005 685 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246
Cma07g01005 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Cma07g01005 685 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Cma07g01005 685 PANTHER - 11 638 - -
Cma07g01005 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 280 IPR013320 -
Cma07g01005 685 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524
Cma07g01005 685 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Cma07g01005 685 Gene3D - 23 270 - -
Cma07g01005 685 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01005 685 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma07g01005 Cma14g00127 CCT
Cma03g00415 Cma07g01005 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00215 Cma-Chr6:1099267 Cma07g01005 Cma-Chr7:5205608 0 dispersed
Cma07g01005 Cma-Chr7:5205608 Cma14g00127 Cma-Chr14:535702 0 dispersed
Cma14g00124 Cma-Chr14:532341 Cma07g01005 Cma-Chr7:5205608 0 wgd
Cma03g00415 Cma-Chr3:4475133 Cma07g01005 Cma-Chr7:5205608 0 wgd
Cma06g00283 Cma-Chr6:1371766 Cma07g01005 Cma-Chr7:5205608 5.36E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68711 PF00069 Pkinase 4.40E-48 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01005 - - csv:101205439 1108.59