Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01046 ATGAATCCAGTCACGGAGGCCCTACCGCCATTGCCGCCGCAGCCCCACCGTCCCTCCACCTCCTGCGACCGTCACCCACAAGAGCGTTTCACTGGTTTCTGCCCTTCATGTCTATGCGAGCGTCTTGCTGTTCTAGAACCTTCTTCGACTTCTACCTCTTCTCGAAAACCACCGCTTAACTCCTCCGCCGCCGCTGCCGCTTTAAAGGCCATTTTCAGACCCTCTGCCGGCGCTGGTCTTCCATCGGCTGCATCTGGCCGGAATAAACCGTCCTCGTTTTTTCCTGAGCTTCGTCGGACTAAGTCCTTCTCGGCGTCAAAGAACGAAGGATTTTCAGGCGTTTTTGAGCCTCAGAGGAAATCCTGCGACGTTAGAGCGCGGAATACTCTGTGTACTCTTTTCACTCAGGATGATGAACGGAATCCGTTGAAGAATGAAGCTCCTCCGGTAAGTAATGGCGGTGTTCACATTGAGGATGAACCGAGAAACTTGGCTTCTTCGTCTGAAGAAGAACAAGACGAAACGGAAACTGAACCTGAAATTGAGATTTCTGTGGAATCCAATGCCGGTAACGTAGTGGACGACAGAGTTCAAGAATTCGTTGAAGAAGATGAAGAAGAAGAACAAGGCGAGGAAGAGGATCATGAAGAACCAAGTAGGCCGGAAACGGAACTGGTTCAAGACGATTTCAAGAGCATAAAGGATCACATAGATCTCGATTCCCAACCTAAGAAACCCTCCGGTCGTGATTTCAAGGAGATTGCCGGCAGTTTCTGGTCCGCCGCCTCTGTTTTCAGCAAGAAATGGCAGAAATGGAGAGACAAACAGAAGCTCAAGAAACAGAGAAATGGCGGTAGCTCCGTTGCATTGCCGGTGGAGAAGCCGATCGGCCGTCAATTCAGAGAAACTCAGTCGGAAATCGCCGATTACGGCTATGGCCGCCGATCTTGCGATACTGATCCTAGATTCTCCCTCGACGCCGGCCGAATCTCCTTCGATGATCCTCGTTACTCCTTCGAAGAACCGCGAGCTTCTTGGGATGGCTATTTAGTAAGCCGTACTTTCACCAGAATGCCGACGATGCTCTCTGTTGTTGAAGATGCTCCGATTCACGTTTCTCGAACCGATACTCAAATTCCGGTTGAAGAGCCTGCAATTCCCGGCAATGACGACGAAACCGTCCCTGGTGGTTCAGAACAAACCAGAGATTATTACTCCGACTCCTCTCGCCGGAGAAGAAGCCTCGACAGATCAAGCTCGTTAAGGAAGACGGCGGTAGCCGTCGTAGCGGATATGGACGAGGTCAAATCATCCTCAAACGCGAAAGTCTCTCCGGCCACCGCCGATTTCTTCTCCGGTCCAAAATTGGTAGTTCCAGACAAAATCCAAAGAGATTCCAACTCGAATTCCTTGCGAGACGACTGTTCGGAGACCTTCGAAATCCCTTTCAGAAACGGCGAGCGTAAGGAGGCGAAAAAGTCCCGGCGGTGGGGCAAAGGCTGGAACATTCTGGCGTTTATCCACCGCCGAAACGGCAACAAATACGAAGACGACGACCGATACAGCAGCAGAACGAACGGCGTAACGAGATCCTTATCGGAATCATGGCCGGAATTTCGAGGCGATCGAAACGGCGACGTTAGAGCAATCGGAGGAATCGGAGGAACGGGATTTAATCCAAAAATGATGAGAAGCAATAGCAGTGTGAGCTGGAGAAGCTCGCAGAGCAACAATGGCGGATCGTTTGGGAGCAGCATGAGAAAGAGCAACAATGGCGGATTGTGGAGGAAGAAGAAAGAAGATTTGGTGTTGGAGAGAAATCCAAGTGCGAGATATTCACCGAACGAGGTCGTCGACAATGGGCTATTACGATTTTATCTGACGCCGATGAAGGGTGGTGGTAGCCGTCGTGGGGGGATTGTGAAGAACCGGCCAAATCCGGCACAGTCCATTGCCAGAAGTCCGTCAGATGGATTCGTCTCACAATCAAACGGACAAGAAATCCTCACAAACAGATTATGTGGCAATCGCCGATCACAATACCCTTTTCAAAACCACATAAAATCCGAACCAAAATCCCTACTTCCATCTCATTCTCCTTCCTTAATCCCCCGTTCTCGACTCGCCGTCGTAATGGCCGCCACTTCCGCCGCCACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGTCAAGTTCCGGCCGAGTCCAAGCCCGATTTTCATTCGGCAAAAAGAAAAGCCCGGCGAAGAAATCGCCTTCGTCAAAGCAGATTCCCGACCGACCTCTATGGTTCCCCGGAGCCAAGGCGCCGGAATGGCTCGATGGAAGCTTGGTCGGCGACTACGGATTCGATCCGTTTGGATTGGGGAAACCAGCAGAGTATCTGCAATACGATTTGGACTCGTTGGATCAGAATCTGGCGAAGAATGTGGCTGGAGATCTAATAGGGACGAGATTTGAGAACTCCGAAGTGAAATCGACGCCGTTTCAACCGTACACGGAGGTTTTTGGGTTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGCTAGCAACCCTCGGCGCTCTCACCGTCGAATGGCTCACCGGCGTCACTTGGCAAGACGCTGGAAAGCCGCTTCCGTTCTCGCTCACGGCATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCGGAGCTAGAGCCGGAGAAGAGATTGTACCCTGGAGGGAAGTTTTTCGACCCGCTGGGGTTGGCGGAGGATCCGGAGAAGAAAGCTGTTCTTCAACTGGCTGAGATCAAACACGCTCGCCTCGCCATGGTTGCCTTCCTTGGGTTCGCTGTTCAAGCTGCTGTGACAGGGAAAGGGCCGCTCAATAACTGGGCGACCCATCTCAGCGACCCCCTCCACACCACCATCATTGACAACTTCTCCTCCTCTTCCTAA 2961 52.08 MNPVTEALPPLPPQPHRPSTSCDRHPQERFTGFCPSCLCERLAVLEPSSTSTSSRKPPLNSSAAAAALKAIFRPSAGAGLPSAASGRNKPSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRARNTLCTLFTQDDERNPLKNEAPPVSNGGVHIEDEPRNLASSSEEEQDETETEPEIEISVESNAGNVVDDRVQEFVEEDEEEEQGEEEDHEEPSRPETELVQDDFKSIKDHIDLDSQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQKLKKQRNGGSSVALPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLDAGRISFDDPRYSFEEPRASWDGYLVSRTFTRMPTMLSVVEDAPIHVSRTDTQIPVEEPAIPGNDDETVPGGSEQTRDYYSDSSRRRRSLDRSSSLRKTAVAVVADMDEVKSSSNAKVSPATADFFSGPKLVVPDKIQRDSNSNSLRDDCSETFEIPFRNGERKEAKKSRRWGKGWNILAFIHRRNGNKYEDDDRYSSRTNGVTRSLSESWPEFRGDRNGDVRAIGGIGGTGFNPKMMRSNSSVSWRSSQSNNGGSFGSSMRKSNNGGLWRKKKEDLVLERNPSARYSPNEVVDNGLLRFYLTPMKGGGSRRGGIVKNRPNPAQSIARSPSDGFVSQSNGQEILTNRLCGNRRSQYPFQNHIKSEPKSLLPSHSPSLIPRSRLAVVMAATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKSPSSKQIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKPLPFSLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSSS 986
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5522385 5530166 + CmaCh07G010460.1 Cma07g01046 298361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01046 986 MobiDBLite consensus disorder prediction 76 97 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 1 25 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 551 594 - -
Cma07g01046 986 Pfam Chlorophyll A-B binding protein 771 955 IPR022796 -
Cma07g01046 986 MobiDBLite consensus disorder prediction 560 591 - -
Cma07g01046 986 Gene3D Chlorophyll a/b binding protein domain 765 986 - -
Cma07g01046 986 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 654 - -
Cma07g01046 986 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 654 IPR008004 -
Cma07g01046 986 SUPERFAMILY Chlorophyll a-b binding protein 758 983 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 1 19 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 139 249 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 647 662 - -
Cma07g01046 986 Pfam Protein of unknown function (DUF740) 9 633 IPR008004 -
Cma07g01046 986 MobiDBLite consensus disorder prediction 198 218 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 374 418 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 741 762 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 404 418 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 634 662 - -
Cma07g01046 986 MobiDBLite consensus disorder prediction 219 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00248 Cma07g01046 CCT
Cma07g01046 Cma14g00086 CCT
Cma03g00372 Cma07g01046 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01046 Cma-Chr7:5522385 Cma20g00366 Cma-Chr20:1768788 1.98E-103 dispersed
Cma03g00360 Cma-Chr3:4245551 Cma07g01046 Cma-Chr7:5522385 0 transposed
Cma14g00086 Cma-Chr14:394474 Cma07g01046 Cma-Chr7:5522385 0 wgd
Cma03g00372 Cma-Chr3:4287670 Cma07g01046 Cma-Chr7:5522385 0 wgd
Cma06g00248 Cma-Chr6:1240207 Cma07g01046 Cma-Chr7:5522385 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01046 - - csv:101218563 995.342