Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g01076 | ATGACAACAACCGTCACGCACTCTCCCGATTGTCGCCCTGAAATTTCAGTATTCCCGCCCACTCGCGATGGCCTGTCCTTCTGGCAGTTCATGATCGCCGGATCAATTGCAGGGTCTGTCGAGCACATGGCCATGTTTCCAGTGGACACACTCAAGACCCGAATCCAAGCCCTTGCCGGATCATCCACCCTCCGACAAGCACTCGCTTCGATTCTCAAATCGGAAGGTCCGGCCGGGCTCTACCGTGGAATCGGAGCAATGGGTCTCGGAGCAGGACCTGCACACGCCGTATACTTCTCTGTATACGAATTCTGCAAACAAAGATTTTCGATTGGGAATCCCAACAACCCATTAGCCCACGCCATTTCTGGAGTCTGCGCAACGGTGGCGAGCGACGCCGCGTTGACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAGGGAGTGAGGGACTGTGCTAGGAGGATTTTGGTTGAGGAAGGAATTGGGGCGTTCTATACTTCTTATTGGACCACGGTTTTGATGAATGCCCCGTACACGGCTGCCCATTTTGCCATTTATGAAGCTGTGAAAAGGGGATTGAAGGAGGGCTCGCCGGGAAGCGATGGCGGGGAGGGGTTGGTTGTCCATGTTACGGCTGGTGCGGCTGCTGGGTCTCTTGCTGCTGGTCTTACAACGCCATTAGACGTAGTGAAAACTCGGCTGCAGTGCCAGGGAGTGTGTGGGTGCGACAGATTGTCAAGCAGCTCAATAACAAATGTGGTTAGGCATGTGGTGAAGAAGGATGGGAAGAGCGGGTTGATGAGAGGGTGGATTCCAAGGATGCTGTTCCATGCGCCTGCTGCTGCCATTGCCTGGTCCACTTATGAAGCCTCAAAGACATTGTTCCAACACCTCCACAATGACAACAATTAG | 933 | 53.59 | MTTTVTHSPDCRPEISVFPPTRDGLSFWQFMIAGSIAGSVEHMAMFPVDTLKTRIQALAGSSTLRQALASILKSEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFCKQRFSIGNPNNPLAHAISGVCATVASDAALTPMDVVKQRLQLKSSPYKGVRDCARRILVEEGIGAFYTSYWTTVLMNAPYTAAHFAIYEAVKRGLKEGSPGSDGGEGLVVHVTAGAAAGSLAAGLTTPLDVVKTRLQCQGVCGCDRLSSSSITNVVRHVVKKDGKSGLMRGWIPRMLFHAPAAAIAWSTYEASKTLFQHLHNDNN | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5743713 | 5745244 | - | CmaCh07G010760.1 | Cma07g01076 | 298391 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g01076 | 310 | Gene3D | Mitochondrial carrier domain | 14 | 204 | IPR023395 | - | |
Cma07g01076 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 211 | 301 | IPR018108 | - | |
Cma07g01076 | 310 | PANTHER | MITOFERRIN-1-RELATED | 10 | 309 | - | - | |
Cma07g01076 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 115 | 199 | IPR018108 | - | |
Cma07g01076 | 310 | Pfam | Mitochondrial carrier protein | 213 | 304 | IPR018108 | - | |
Cma07g01076 | 310 | Pfam | Mitochondrial carrier protein | 25 | 109 | IPR018108 | - | |
Cma07g01076 | 310 | Pfam | Mitochondrial carrier protein | 115 | 202 | IPR018108 | - | |
Cma07g01076 | 310 | SUPERFAMILY | Mitochondrial carrier | 24 | 296 | IPR023395 | - | |
Cma07g01076 | 310 | PRINTS | Mitochondrial carrier protein signature | 30 | 43 | IPR002067 | GO:0055085 | |
Cma07g01076 | 310 | PRINTS | Mitochondrial carrier protein signature | 43 | 57 | IPR002067 | GO:0055085 | |
Cma07g01076 | 310 | PRINTS | Mitochondrial carrier protein signature | 130 | 148 | IPR002067 | GO:0055085 | |
Cma07g01076 | 310 | PRINTS | Mitochondrial carrier protein signature | 172 | 190 | IPR002067 | GO:0055085 | |
Cma07g01076 | 310 | PRINTS | Mitochondrial carrier protein signature | 220 | 242 | IPR002067 | GO:0055085 | |
Cma07g01076 | 310 | PANTHER | MITOFERRIN-LIKE | 10 | 309 | - | - | |
Cma07g01076 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 25 | 108 | IPR018108 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00330 | Cma07g01076 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma07g01076 | Cma-Chr7:5743713 | Cma20g00327 | Cma-Chr20:1604747 | 3.79E-140 | dispersed | |
Cma03g00330 | Cma-Chr3:4065207 | Cma07g01076 | Cma-Chr7:5743713 | 4.36E-177 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g01076 | K15113 | - | csv:101210464 | 506.138 |