Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01076 ATGACAACAACCGTCACGCACTCTCCCGATTGTCGCCCTGAAATTTCAGTATTCCCGCCCACTCGCGATGGCCTGTCCTTCTGGCAGTTCATGATCGCCGGATCAATTGCAGGGTCTGTCGAGCACATGGCCATGTTTCCAGTGGACACACTCAAGACCCGAATCCAAGCCCTTGCCGGATCATCCACCCTCCGACAAGCACTCGCTTCGATTCTCAAATCGGAAGGTCCGGCCGGGCTCTACCGTGGAATCGGAGCAATGGGTCTCGGAGCAGGACCTGCACACGCCGTATACTTCTCTGTATACGAATTCTGCAAACAAAGATTTTCGATTGGGAATCCCAACAACCCATTAGCCCACGCCATTTCTGGAGTCTGCGCAACGGTGGCGAGCGACGCCGCGTTGACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAGGGAGTGAGGGACTGTGCTAGGAGGATTTTGGTTGAGGAAGGAATTGGGGCGTTCTATACTTCTTATTGGACCACGGTTTTGATGAATGCCCCGTACACGGCTGCCCATTTTGCCATTTATGAAGCTGTGAAAAGGGGATTGAAGGAGGGCTCGCCGGGAAGCGATGGCGGGGAGGGGTTGGTTGTCCATGTTACGGCTGGTGCGGCTGCTGGGTCTCTTGCTGCTGGTCTTACAACGCCATTAGACGTAGTGAAAACTCGGCTGCAGTGCCAGGGAGTGTGTGGGTGCGACAGATTGTCAAGCAGCTCAATAACAAATGTGGTTAGGCATGTGGTGAAGAAGGATGGGAAGAGCGGGTTGATGAGAGGGTGGATTCCAAGGATGCTGTTCCATGCGCCTGCTGCTGCCATTGCCTGGTCCACTTATGAAGCCTCAAAGACATTGTTCCAACACCTCCACAATGACAACAATTAG 933 53.59 MTTTVTHSPDCRPEISVFPPTRDGLSFWQFMIAGSIAGSVEHMAMFPVDTLKTRIQALAGSSTLRQALASILKSEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFCKQRFSIGNPNNPLAHAISGVCATVASDAALTPMDVVKQRLQLKSSPYKGVRDCARRILVEEGIGAFYTSYWTTVLMNAPYTAAHFAIYEAVKRGLKEGSPGSDGGEGLVVHVTAGAAAGSLAAGLTTPLDVVKTRLQCQGVCGCDRLSSSSITNVVRHVVKKDGKSGLMRGWIPRMLFHAPAAAIAWSTYEASKTLFQHLHNDNN 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5743713 5745244 - CmaCh07G010760.1 Cma07g01076 298391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01076 310 Gene3D Mitochondrial carrier domain 14 204 IPR023395 -
Cma07g01076 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 301 IPR018108 -
Cma07g01076 310 PANTHER MITOFERRIN-1-RELATED 10 309 - -
Cma07g01076 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 199 IPR018108 -
Cma07g01076 310 Pfam Mitochondrial carrier protein 213 304 IPR018108 -
Cma07g01076 310 Pfam Mitochondrial carrier protein 25 109 IPR018108 -
Cma07g01076 310 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Cma07g01076 310 SUPERFAMILY Mitochondrial carrier 24 296 IPR023395 -
Cma07g01076 310 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085
Cma07g01076 310 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Cma07g01076 310 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Cma07g01076 310 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085
Cma07g01076 310 PRINTS Mitochondrial carrier protein signature 220 242 IPR002067 GO:0055085
Cma07g01076 310 PANTHER MITOFERRIN-LIKE 10 309 - -
Cma07g01076 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 108 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00330 Cma07g01076 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01076 Cma-Chr7:5743713 Cma20g00327 Cma-Chr20:1604747 3.79E-140 dispersed
Cma03g00330 Cma-Chr3:4065207 Cma07g01076 Cma-Chr7:5743713 4.36E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01076 K15113 - csv:101210464 506.138