Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g01087 | ATGGGAAGAAGTAGTTTGAGAACCTTTGTTATGATTGAGGTTATTGTTTTGACATCGTTGTTCGCCATTGTTCCAACGTCTATGGCACAGCTTCGACAAGATTTTTACGCTGATGTTTGTCCTAACGTTGAGAGCATAGTTCGAAATGCTGTCACAAAGAAGTTCCGACAGACGTTTGTTACTGTTCCTGCCACCCTCCGCCTCTTCTTTCACGACTGTTTTGTTCAGGGATGTGATGCGTCGGTGATGATTGGTTCGGACGGAGGTAACACAGTGGAGAAGGATCATCCTGATAACCTTTCATTAGCAGGAGATGGATTTGATACGGTGATTAAAGCAAAAGCTGCCGTTGACGCTGTGCCAGAATGTAGAAATAAAGTGTCGTGTGCTGATATTCTCGTGATGGCTACTCGAGATGTCATCTCATTGGCTCGAGGGCCATCATATGCAGTGGAGCTAGGGAGAAAGGATGGGCTTGTTTCAAGGGCTTCAGATGTTGAAGGCAAATTGCCGAAGCCAAGCTTTAATCTCAATCAGCTCAATGCCATGTTTGCTGCCAATGGCCTTTCCCAGACTGACATGATTGCTCTCTCCGCTGCGCACACCGTCGGATTCTCCCACTGCAGCAAATTCGCAAACAGAATATACAATTTCAGCCGTACAAATCCAGTGGATCCAACGCTGAACCCAACCTATGCAAGCAGGCTTCAAGAGATGTGCCCAAGAGACGTGGATCCAAGGATAGCCATAAACATGGACCCAAACACACCCACAAGGTTCGACAATATGTACTTCAAGAATCTGCAGCAAGGAATGGGCCTCTTCACTTCTGACCAAGTGCTCTTCAGTGACACAAGGTCGAGACCCACTGTCAAGGTTTGGGCTCATAGTGGACAAACCTTCTACACTGCCTTCGTTACTGCCATGACCAAGTTGGGTCGCGTAGGTGTCAAGACCGGATCCGACGGCAACATTCGCACTGACTGCGGTGCTTTCAACCCTTGA | 1005 | 47.76 | MGRSSLRTFVMIEVIVLTSLFAIVPTSMAQLRQDFYADVCPNVESIVRNAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSDGGNTVEKDHPDNLSLAGDGFDTVIKAKAAVDAVPECRNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPKPSFNLNQLNAMFAANGLSQTDMIALSAAHTVGFSHCSKFANRIYNFSRTNPVDPTLNPTYASRLQEMCPRDVDPRIAINMDPNTPTRFDNMYFKNLQQGMGLFTSDQVLFSDTRSRPTVKVWAHSGQTFYTAFVTAMTKLGRVGVKTGSDGNIRTDCGAFNP | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5845558 | 5847545 | + | CmaCh07G010870.1 | Cma07g01087 | 298402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 126 | 136 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 145 | 160 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 192 | 204 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 251 | 266 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 267 | 284 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Plant peroxidase signature | 307 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | Gene3D | - | 34 | 333 | - | - | |
Cma07g01087 | 334 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 | |
Cma07g01087 | 334 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 333 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | Gene3D | Peroxidase, domain 2 | 171 | 312 | - | - | |
Cma07g01087 | 334 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 334 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PANTHER | - | 10 | 333 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 193 | 203 | IPR019793 | - | |
Cma07g01087 | 334 | CDD | secretory_peroxidase | 30 | 332 | IPR033905 | GO:0004601|GO:0042744 | |
Cma07g01087 | 334 | Pfam | Peroxidase | 47 | 296 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PANTHER | PEROXIDASE | 10 | 333 | - | - | |
Cma07g01087 | 334 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Haem peroxidase superfamily signature | 127 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Haem peroxidase superfamily signature | 145 | 157 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Haem peroxidase superfamily signature | 193 | 208 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma07g01087 | 334 | PRINTS | Haem peroxidase superfamily signature | 253 | 268 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01568 | Cma-Chr1:10860732 | Cma07g01087 | Cma-Chr7:5845558 | 7.86E-148 | dispersed | |
Cma03g00934 | Cma-Chr3:6685302 | Cma07g01087 | Cma-Chr7:5845558 | 0 | dispersed | |
Cma07g01087 | Cma-Chr7:5845558 | Cma20g01022 | Cma-Chr20:7265817 | 0 | dispersed | |
Cma07g01087 | Cma-Chr7:5845558 | Cma07g00660 | Cma-Chr7:2885001 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g01087 | K00430 | - | csv:101208254 | 590.112 |