Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01106 ATGGCCCTTGACCCACTTCCCCACCATTCTTCCCGATGGGGAAAAACGACGGAGAACACCCACCGCCCTCCGCCGTCGGTTCCGCTCAGTCCCAAGGCCGATGCTGTTCTGGGTGTGTTTCAATTCGAAGGCTCATTGGCTTCAAATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGCTGCCCCCTTTTTTCCATTATGCAGATCAAAAGGATCTGGGTCTTAATCCCTCGTCATGATATAGTAGCAACGTTCGTTGTTGAGAGACCAGTTTCTTTGCTGGAAGACAATATCGAGCGACTCCGGACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTTTAAACTCTTTATCAGGATCAAACCGTACAAAAGTTGTATTCGGCATTGATCCAGATACTGATGATCCCGAAATCCCGTCAACTTATCTGAGTTTAATCAGGTCGACCTGTGCAAGTCTAGTAACAAATCAGTCGTTCCTCCGCATTACTAAATCCATGTTTGGGGAGGCGTTTTCGTTTGAAGTACTGAAATTCCCCGGAGGAATAACGATAATCCCGCCTCAGAGTGCATTTCTTTTGCAGAAAGTTCAAATTCTTTTCAACTTTACATTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACAAGCCAATTGGATGCGGGATTACGACTAGCTCCCTACGAGATTTTGTATATTAAACTGTGGAATGCGGAAGGGTCGACTGTGACTGCCCCAACGATTGTCCAGTCATCTGTTCTTCTAGAAGTTGGAAATACGCCATCGATGCAACGGTTGAAGCAGCTAGCTCAGACCATCTCTGTTTCTAATTCTAGCAACCTCGGCCTGAATAATACCGAGTTTGGAAAAGTGAAGCAAGTTCGCCTTTCCTCGATTCTTAAACACTCCCTCAATGGTATGGATGGGAAAGGCCCCATAAGGTCACCTTCTCCAGCTCCTACACCACAGTCCCATAACTTCCATCATCCACCATCTCACCACCATCACCACCATCATTCTCCTCTAACGCCTGTAATTTCACCTGCCCCTGCGCCTGAGACAGGTGCACCGGAATATGGGTTGCCTGCCCCTAAAAGTGCAGCATCGCCTAAGCGAAGTTACGAGGCAAAGCCTCCTGGTTGTCAATATAAGAGGAAATCTGGTAGGAAAGAGGGAAAGCAACCTTATTTATCCCCGCTTGCGTCGCCCAGCATATCTCCTGTTCATTCTGCTGCATCGCCATCACAACAACATCATGTCTCTCCAACTCAGGCATCGACTCCATTGCCAAGTGTCATTTACGCTCATGTTCAACCACCATCGAAAAGTGAGTCCAACCACCCCGAAAAGTCCACGACGAGTCCATCCATTGTGCCATCTCCATCTCCATCTCAATCTAGCGCACATCATTGGTGTATGATTACTCGGTGGAGATTCACACTGTCTCTAATTGTCGCATTCTACATGTAA 1521 46.42 MALDPLPHHSSRWGKTTENTHRPPPSVPLSPKADAVLGVFQFEGSLASNASSFCYCPLPCSFLLFFGCPLFSIMQIKRIWVLIPRHDIVATFVVERPVSLLEDNIERLRTDIFEEFPIPSIKVDILSLNSLSGSNRTKVVFGIDPDTDDPEIPSTYLSLIRSTCASLVTNQSFLRITKSMFGEAFSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLDAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMQRLKQLAQTISVSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGMDGKGPIRSPSPAPTPQSHNFHHPPSHHHHHHHSPLTPVISPAPAPETGAPEYGLPAPKSAASPKRSYEAKPPGCQYKRKSGRKEGKQPYLSPLASPSISPVHSAASPSQQHHVSPTQASTPLPSVIYAHVQPPSKSESNHPEKSTTSPSIVPSPSPSQSSAHHWCMITRWRFTLSLIVAFYM 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6002217 6006035 - CmaCh07G011060.1 Cma07g01106 298421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01106 506 MobiDBLite consensus disorder prediction 455 479 - -
Cma07g01106 506 MobiDBLite consensus disorder prediction 395 409 - -
Cma07g01106 506 PANTHER F20B24.21 85 502 - -
Cma07g01106 506 MobiDBLite consensus disorder prediction 416 443 - -
Cma07g01106 506 MobiDBLite consensus disorder prediction 320 443 - -
Cma07g01106 506 MobiDBLite consensus disorder prediction 1 28 - -
Cma07g01106 506 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 85 502 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma07g01106 Cma14g00506 CCT
Cma03g00161 Cma07g01106 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01106 Cma-Chr7:6002217 Cma14g00506 Cma-Chr14:2469215 1.17E-99 dispersed
Cma03g00161 Cma-Chr3:2180558 Cma07g01106 Cma-Chr7:6002217 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01106 - - bhj:120073837 635.18