Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01174 ATGCATAAGCGTCCCGGTAAGCAACAGTCGGAATCGCTGTCGAATAAGATCTACGAATACAGAGGGGTGTTATTGTTCACGTCTCTTTCGCTTTTCCTAATCGCCTTTGTTCTCTATTTCATGCCGGGCCGTGAAAATTACTCGTTCAACCACCGCAAGGTTTACCCTGATCACAGGTCGTCTTCTTCTTCTTCTAAATCCACTTATGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCAAAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTTGAACAACTTAATCCAGGATTGAGTGCATATGCTGACAACCCCAAGAATGCTGCAGCTTCTCTAATTTCCCTTTTGGAAAAAGCGGAAAATGTGGTTCCTAAAGGACTGCGGTCAATGGCCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCTCTGAAGGGGGATACATCTGACAAAATTTTGCAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGACCTCAGGTTGGAGGACAGTGCTGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACATTAAACTATCTGCTTGGGAACTTGGGCAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATATGCTATCTCCGAAACGGATGCTGCTCGATTATCAGAAGCAGAGAGCGTATACATAAAAAAAATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGATTACTAGCTGCTCGAGCGGAGGTTTTGAGTGTTTCTAAAAATTCTAGCAATGATTGCATCCTATCTGGATACAAAGGAGCATACCAATACGGGGGAAAGGACTATAAAGCATCAGCCTCTTCATCAGGCTCCAGCTTTAACGGATGCAAGAGGACAGTCGTGGAGGCTCTCAAGGTTAATGAATCAACGTGTACTCACGAGCAGTGCACTTTCGGTGGAGTTTGGAACGGTGGAGGAGGCGACGGGCAGAAGAATCTCTACGTTGCTTCCTTTTTCTTCGACAGGGCTGCTGAGGCTGGTTTTGCTGGCCCCAACAAGCCATTTGCTGAAGTTCGTCCTGTAGACTTCCGTGATGCAGCGAGGCAGGCATGCCAAATCAAACTCGAGGATGCTGGTACATATCCCAAGGTCAAGAAGGATAACCTCCCATACTTGTGTATGGATCTTGTGTATCAATACGCACTACTTGTAGATGGATTAGGCCTAGATCCTTGGCAAAAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTTGAAGCAGCCTGGCCTCTAGGCAGCGCCATTGAAGCTGTATCGTCGTTAGCCTAA 1404 45.94 MHKRPGKQQSESLSNKIYEYRGVLLFTSLSLFLIAFVLYFMPGRENYSFNHRKVYPDHRSSSSSSKSTYAVIFDAGSSGSRVHVFCFDQNLDLLPVGKDIELFEQLNPGLSAYADNPKNAAASLISLLEKAENVVPKGLRSMAPVRVGATAGLRALKGDTSDKILQAVRDLLRDKSDLRLEDSAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISETDAARLSEAESVYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSKNSSNDCILSGYKGAYQYGGKDYKASASSSGSSFNGCKRTVVEALKVNESTCTHEQCTFGGVWNGGGGDGQKNLYVASFFFDRAAEAGFAGPNKPFAEVRPVDFRDAARQACQIKLEDAGTYPKVKKDNLPYLCMDLVYQYALLVDGLGLDPWQKITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6438841 6446009 + CmaCh07G011740.1 Cma07g01174 298489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01174 467 CDD NBD_sugar-kinase_HSP70_actin 71 230 - -
Cma07g01174 467 PANTHER APYRASE-LIKE PROTEIN 2 465 - -
Cma07g01174 467 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787
Cma07g01174 467 Gene3D - 69 460 - -
Cma07g01174 467 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 465 IPR000407 GO:0016787
Cma07g01174 467 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 465 IPR000407 GO:0016787
Cma07g01174 467 Gene3D Exopolyphosphatase. Domain 2 189 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00474 Cma-Chr1:2401495 Cma07g01174 Cma-Chr7:6438841 3.49E-31 dispersed
Cma07g01174 Cma-Chr7:6438841 Cma09g01056 Cma-Chr9:5518678 6.89E-175 dispersed
Cma03g00250 Cma-Chr3:3555555 Cma07g01174 Cma-Chr7:6438841 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01174 K14641 - csv:101220305 791.186