Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01198 ATGGTTGTGATGGATATCATGGTGATTAGGGTTAGGCCATTCACCCGAATGGAAGCGTCTGGTAGCGACCCCGACTCTCATAGAACTGCTTCTACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCTAATATGATTCAGGCTCCGCTTTCTGCTCTGTTAGAGTATTCGGGTCTTCTTCGTGGCCGCCCTAGTCCTCAAGAATCCGAGGCATTGATAAGTGCACGATTACCTTCAGGATTGCGAGGCCATCTTCGTAGTCAGATTGAAGAATCTTCTGGTGTCACTAACGACGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGTTAGGGACAATGCTGGCCTAGTAGTTGGGCAAGTGAGGGAGGTCGGCAGTCAGAATTCAGCATCTTTGCAATCTGTTTCGGGGTTGGCATCATCAGAGTTTAGCCAGGGAGATGCTGCTACTGGACGAGGTGCGATAGAGGGTATTCCTCAACCGATTAACGAAGGTGCTGATGGAGATGCGTCGGAGGCAGCTGGGGGAAATAGCAGGGATTCTTCTTACCAAAGGTACGATATTCAACAGGCTGCCCGGGGGATTGAGCAGATTCTTCCATTTAGTTTTCTTCTACTGGTAGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATTGCTGCTTTCATGTACAAGTCGAATGATATATTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAGATCTCTGTTTTGGTTGCCATTTCTCTTGCATTCACTTTTCATATTATCGGTGTGTACTGGTGGTATCAGAAGGACGATCTCTTATATCCATTGATCATGCTTCCTCCCCGAGCAATACCTCCTTTTTGGCACGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAAGCAGGGATGGTGGTCAAGTGTGTTTTATTGATGTATTACAAGAACAGCCGAGGCCGCAATTATCGTAAACAGGGACAAATGCTAACTTTAGTCGAATATCTGCTTCTACTGTACCGTGCATTGTTGCCTACTCCCGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGAAGCTTATTTTCGTCACTATTGACAGGACTTTACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCATGGTCGCGTAAAGAGGTGCATTATGGGGCCTATGCAACATCGGAGCAGCTGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCTTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGGACATGTCCATTGTGTAGGGCTTTGGTTAAGCCTGCGGATCTCAGGTCATTTGGGGATGGATCAACAAGTCTGTTTTTCCAGGTTTTCTAAGGCATTTGCTTCCGGTTTGAAGAGAGCTAAAGGCAGCCATAGCATTTTTACCTACACACAATGTACATCTAACTAA 1518 45.19 MVVMDIMVIRVRPFTRMEASGSDPDSHRTASTSGSSRRFGMLAASNMIQAPLSALLEYSGLLRGRPSPQESEALISARLPSGLRGHLRSQIEESSGVTNDGEVSIRIIGAGEPEHVRDNAGLVVGQVREVGSQNSASLQSVSGLASSEFSQGDAATGRGAIEGIPQPINEGADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVAISLAFTFHIIGVYWWYQKDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAGMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKAWSRKEVHYGAYATSEQLVICVLFAKRRCMLLSYSDVNTYFVKIVYQSGSSGNGHVHCVGLWLSLRISGHLGMDQQVCFSRFSKAFASGLKRAKGSHSIFTYTQCTSN 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6577258 6585357 - CmaCh07G011980.1 Cma07g01198 298513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01198 505 MobiDBLite consensus disorder prediction 155 187 - -
Cma07g01198 505 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 17 416 IPR044235 GO:0061630|GO:1904294
Cma07g01198 505 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 416 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00274 Cma07g01198 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00096 Cma-Chr4:475083 Cma07g01198 Cma-Chr7:6577258 3.60E-142 dispersed
Cma04g01053 Cma-Chr4:5440327 Cma07g01198 Cma-Chr7:6577258 2.50E-135 dispersed
Cma03g00274 Cma-Chr3:3712092 Cma07g01198 Cma-Chr7:6577258 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01198 - K22379 csv:101205267 681.789