Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01205 ATGTTTTGGACGGTAGAACGGGGGAAAAGCTTGATCCCAGCGAATATCAGATGCTCAGCTCCCCCTAAAAATCGTGTTCGTTTGTTTGCTTGTGATGCTGTTTGTGACCTGATGGGGAAGGATTGTGTGTGTGTTTTTCTGCTATGGTTTTGCTCCTCCTTGCTCCTTGCTGGTGCTGAAACCACAGAGCCTTCTGATGTTGCTGCATTGCTAGCAATAAAGAGGAGTCTAATTGATCCTATGGATCACCTTAAAAACTGGACTAAGGGAGATCCTTGCATTAATGGTTGGACTGGAGTGGTATGCAACTCTACCAATGGAAATGTTGGGAACTTACGTGTCAAAGAACTCCATCTGTTGAATCAGAACCTATCTGGAAACTTAGCCCCTGAGATCAGCCAATTGTCCCAACTTGAGAAGTTAGATTTCATGTGGAATGACTTAACTGGTTCAATTCCGAAGGAGATTGGCAGTCTTAGGTTCCTTAGACTATTACTCTTAAATGGAAATAAACTATCTGGTTCTCTTCCAGATGAGCTTGGTAATCTTACAAATCTCATCCGATTCCAAGTAGATGAGAATCAACTTTCAGGGCCTATCCCAAAATCATATGCTAACTTGACCAATGTGAAGCACATCCACTTCAATAACAACACACTCAGTGGTCCAATTCCATCCGAGCTTTCCACATTACAGAAGCTTATTCACTTGCTTTTGGATAACAATAAATTGTCGGGTTCTCTGCCACCGGAATTCTCGAGACTGCCAGCTATAAGCATTCTGCAACTTGATAACAACAATTTGGAAGGAGAAATTCCAGCATCTTATGAAAGTTTTTCTACATTAGTGAAATTAAGTCTTAGGAATTGCAGCTTGGAGGGACAGATTCTTAATTTTAGCAAGAATGCAAACCTGAGTTACTTGGATCTTAGCTGGAACCATTTTACTGGACCCATACCACCATATAACCTCTCTTCTCAAATGACAACGATAATTTTGTCACACAACCAGCTGAATGGATCTATCCCCAGCAGTTTCTCCGGTCTTCCTGCCCTTCAGAAACTGTCACTTGAGAACAACTCTCTAAATGGTTCTGTACCTTCATCTCTATGGGAGAAAGTGGTCTTCAATTCAAGTGCTCGACTTTTACTTGATTTTCGGGACAATTCATTTTCTGGCATTTCCGGAAGCACGAACCCTCCAGTTAATGTCACTCTAAGGCTTGAAGGAAATCCATTCTGCCTAAATTTTAGAGGACAGAACTCTATGTTGTTCTGTGCATCAAAAACTGTAGATGATGGGTTGTTTAGAAGCTCGAGCACCTTCAACAAATCATGTCCAGTCAGAGGTTGTCCAACAGATGTTTTTTTCGAATACGTGCCAGACGCCCCAGATCCATGCTTTTGTGCAGCACCCCTTGGGATAGGATATAGGCTAAAGAGTCCAAGTTTTTCCTACTTTCCTCCATACATATATTCATTTCAAGAATATGTGACAAAGGAACTCACTTTGGATAAGTATCAATTGTCGATCGATTCATACGATTGGGAAGGATCTCGTATGAGGATGTATCTTAAGATTTTCCCATTATTTGATAGTGGTTCTCACTTGTTGAATGACAGTGAGGTGTTTCAAATTACAGAAAAATTTATGTCGTGGAATTTTACTCGTAATGACCTCTTTGGCCCGTACGAGCTTCTCAACTTCACGTTCCCCGACCGTTCTCAGATCGTCATTTTCCATAGAGAGAAGGTGGGGATTGGTGCAGGCATCTTGGCTGCCATTATAGTTGGATCTGTCACCTGTGTTGTTTTGATTGTAGCAGTGGTCATACTTCTGTTCACTAGGCGTTCGAGTAGCCGTAACAATTTGTCAAGGAAAAACTTCTCTTCGGTGATTGGTATGAAGATTGATGGTGTAAAAGCATTTTCATTCAAGGAAATGCAATCAGCTACTGGATATTTCAACTGCTCATCCCAAGTAGGCCATGGAGGATATGGCAAGGTCTATAAAGGCATATTGTCTGATAATTCAGTTGTCGCTATCAAGCGTGCAGAAGAAGGATCGTTGCAAGGCCAAAAAGAATTTTTGACAGAGATACACCTCTTATCACGAGTTCATCACCGAAATCTAGTTTCGCTAATCGGATATTGTGATGAAGAAGGGGAACAAATGCTGGTTTACGAGTTTATGTCGAACGGGACTTTGCGGGACTGGATTTCTGGTTGTGAATTTTCTGCCAAAACTGCAGTAAACCTGAACTTTCGTAGGAGATTACAAATTGCATTGGGTTCAGCTAAAGGTATACTGTATCTCCATACTGAAGCAAATCCTCCTATATATCACCGAGACATAAAATCTAGAAACATACTTCTCGACGCCAAGCTCACTGCCAAAGTCGCTGATTTCGGGCTGTCACGTCTTGCTCCCGATCTCGACTATGAAGGGGACGCTTCTGGACACGTATCTACTGTTGTGAAGGGTACCCCGGGTTACCTTGATCCGGAGTACTTTTTAACCCATAAATTGACCGACAAAAGTGATGTCTATAGCCTTGGCGTCGTGCTCTTGGAGCTCTTAACCGGAATGCATCCTATTTCTCACGGCAAAAACATCGTTCGTGAGGTAAAACTGGCACATCAACTAGGAACAATGCTTTCAATTGTTGACACCAGGTTGGGTTCGGTCTCGGCCGAGTGTTTAGAGAGGTTTGCTGCTTTGGCACTCAGTTGTTGCCATGACAAACCAGAAGACAGGCCGTCTATGCGTGTTGTAGTGAGGGAGCTGGAGAACATACTTAACATGATGCATGATGATAGTGGCACCTTGTGTTCCAACTTGTCTCCGAGCTCGAGCACCGGACTTCCATCCTCACCGACGTCGACATCGGCATCGTACATTGCCCACGACCAGTTTGCATCGGGAAGCATTTCGGGGAGCGATCTCATCAGTGGCGTTGAGCCAGCCATCAGACCTCGCTGA 2982 43.29 MFWTVERGKSLIPANIRCSAPPKNRVRLFACDAVCDLMGKDCVCVFLLWFCSSLLLAGAETTEPSDVAALLAIKRSLIDPMDHLKNWTKGDPCINGWTGVVCNSTNGNVGNLRVKELHLLNQNLSGNLAPEISQLSQLEKLDFMWNDLTGSIPKEIGSLRFLRLLLLNGNKLSGSLPDELGNLTNLIRFQVDENQLSGPIPKSYANLTNVKHIHFNNNTLSGPIPSELSTLQKLIHLLLDNNKLSGSLPPEFSRLPAISILQLDNNNLEGEIPASYESFSTLVKLSLRNCSLEGQILNFSKNANLSYLDLSWNHFTGPIPPYNLSSQMTTIILSHNQLNGSIPSSFSGLPALQKLSLENNSLNGSVPSSLWEKVVFNSSARLLLDFRDNSFSGISGSTNPPVNVTLRLEGNPFCLNFRGQNSMLFCASKTVDDGLFRSSSTFNKSCPVRGCPTDVFFEYVPDAPDPCFCAAPLGIGYRLKSPSFSYFPPYIYSFQEYVTKELTLDKYQLSIDSYDWEGSRMRMYLKIFPLFDSGSHLLNDSEVFQITEKFMSWNFTRNDLFGPYELLNFTFPDRSQIVIFHREKVGIGAGILAAIIVGSVTCVVLIVAVVILLFTRRSSSRNNLSRKNFSSVIGMKIDGVKAFSFKEMQSATGYFNCSSQVGHGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIHLLSRVHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDWISGCEFSAKTAVNLNFRRRLQIALGSAKGILYLHTEANPPIYHRDIKSRNILLDAKLTAKVADFGLSRLAPDLDYEGDASGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVLLELLTGMHPISHGKNIVREVKLAHQLGTMLSIVDTRLGSVSAECLERFAALALSCCHDKPEDRPSMRVVVRELENILNMMHDDSGTLCSNLSPSSSTGLPSSPTSTSASYIAHDQFASGSISGSDLISGVEPAIRPR 993
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6618361 6634581 - CmaCh07G012050.1 Cma07g01205 298520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01205 993 SUPERFAMILY Protein kinase-like (PK-like) 640 956 IPR011009 -
Cma07g01205 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 961 - -
Cma07g01205 993 Gene3D Ribonuclease Inhibitor 63 325 IPR032675 -
Cma07g01205 993 Gene3D Ribonuclease Inhibitor 326 412 IPR032675 -
Cma07g01205 993 ProSiteProfiles Protein kinase domain profile. 655 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01205 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Cma07g01205 993 Gene3D Transferase(Phosphotransferase) domain 1 731 945 - -
Cma07g01205 993 Pfam Leucine rich repeat N-terminal domain 64 103 IPR013210 -
Cma07g01205 993 SUPERFAMILY L domain-like 273 414 - -
Cma07g01205 993 Gene3D Phosphorylase Kinase; domain 1 626 730 - -
Cma07g01205 993 SUPERFAMILY L domain-like 62 321 - -
Cma07g01205 993 SMART serkin_6 655 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01205 993 Pfam Protein kinase domain 658 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01205 993 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Cma07g01205 993 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 43 961 - -
Cma07g01205 993 CDD STKc_IRAK 661 932 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00280 Cma07g01205 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01205 Cma-Chr7:6618361 Cma13g00009 Cma-Chr13:181558 0 dispersed
Cma03g00280 Cma-Chr3:3750096 Cma07g01205 Cma-Chr7:6618361 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68718 PF00069 Pkinase 3.20E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01205 - - cpep:111781604 1451.42