Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01217 ATGAAGGAAATCCATCACGTACGTCTTGCATTTGCATCTATCTGTGTTTTCGTTTTCTTGTTCTTCAATGTTCATGTGATTTCAGCACAAAACTACATCCCTCGGGATTTCATCCTCCTCAATTGTGGAGGACCTTCCACTGCCGACGACATGGATGGCCGGAAATGGATGACCGATGACAAATCCAAGTTTCTTCCCGCGGCAGGGAATAGCACTACATCGAGAGCCGCTACTCAGGTTCCTTCAGTTCTTGAAACTCCTTTCATGACGACTAGGGTTTTTCACTCTAATTTCACCTATACCTTTCCTGTGGCTCCAACTCGTTTATTCCTTCGTCTGTACTTTTATCCTTCTTCCTATGGCGGCCTTGATGCATCTGATGCTCGATTCTCTGTTTCCACTCAAACCCATACTCTCCTTAATAACTTCAGCGCTTCACAAACAGCTGAGGCTCTGAATTTTCCGACTATCGTTAAGGAATACTCGATCAATGTTGAAAATGGAAGGTTGAGCTTGACTTTCACTCCGTCCCCCACTCATCCAAAGGCTTATGCGTTTGTTAACGGGATCGAGATTGTATCTATGCCCGATATTTACAGTGAAACTTCCGGGACTGTTTTGATTGTTGGCCAATCTAGTCCTTTCACTGTGGATAACACCACTGCGCTCGAGAACATCCGTCGGTTAAATGTCGGGGGGAATGATATTTCGCCTTCTGCTGATACGGGGATGCATAGGCCTTGGTTTGATGATTCTCCATATTTGTTTGCTGCAGCAAAGGGAGTGACAACGATTACGGAACAGAACACAAGGATTACTTATCCTCCCAGTATTTCTACTTATGTTGCGCCGGTTGATATCTACTCTACTGCTAGAACTATGGGACCTGATAGCAATGTCAATCTGAATTATAATTTGACATGGGTTTTCTCTGTTGATTCTGGCTTCTTCTACCTTGTTAGGCTCCATTTTTGTGAGATTGATGCAGGTATCACGAAGGTTAACCAAAGAGTGTTCGACATTTTCATCTTTAATCAAACTGCTACGCTGAGTGTTGACGTGATTGAATCGGCTGGAAGTAATTATGCTCCTATGTTCAAAGATTACGTGGTTATGGTTCCAAGCTATGGAGATCCGCAGAAGGATTTATGGCTCCAGCTGCATCCACACAAGTCTTCACGACCCAATTACTATGATTCAATCTTGAACGGAGTGGAGATCTTCAAAATTAACAACTCGGATGCTAATCTTGCGGGGCCGAATCCTGTTCCTGCAGCGAAACAAGAGATTATAGATCCATCATTAGCCATCCCAGGATCATCTCATGGTAAATCGAAGAACAGGATGGCGATTATAGCTGGAGTTGTTTGTGGTGCAGTTGTTTTGGGTCTGATCATTGGTTTCTTTGTTGTTGCTGCTAAGCGTCGGCGTGGGATGGATTGTATTTCTGTTACAGGACAATCAGGATGGCTTACTCTTTCTGTCTATGGAAATTCCCCTTTGGCTGAGACAAATGCAGATGGAAGCTATGCATCCTCTCTGCTTTCCAATCGCCGCCACTTCTCATTTGCTGAGATCAAGGCTGCCACAAGGGAGTTTGATGAATCTTTAGTACTTGGAGTAGGAGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGAGACTAGGAAAGTTGCTATCAAGCGTGGGAACCCTCTCTCGGAGCAAGGTGTTCATGAGTTCCAAACTGAGATTGATATGCTGTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGCGAAGAGAATTGTGAAATGATCCTTGTTTATGATTACATGTCTCATGGAACACTCCGTGAGCATCTATACAAGTCCCACAACCCGCCATTGTCTTGGAGGCAAAGGCTTGAGATTTGCATTGGAGCTGCCCGTGGACTGCATTATCTACACACTGGTGCCAAGCATACAATTATTCACCGAGATGTGAAGACAACCAATATCCTTTTGGATGAAAAGTGGGTGGCGAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCGTCATTGGATCATACACATGTTAGCACCGTAGTGAAAGGTAGTTTTGGATACTTGGATCCTGAATACTTTAGACGACAGCAATTGACTGAGAAATCAGATGTTTACTCGTTCGGTGTCGTTCTCTTTGAGGTTCTATGCGCTCGGCCAGCTCTGAACCCAACACTCCCCAAGGAGGAAGTGAGTTTAGCAGAATGGGCTGCTCATTGCTACATCAAAGGCGTTTTAGATCAGATAATCGATACGTTCCTAAAGGGAAAGATTGCATCTGAGTGTCTCAAGAAGTTTGCGGAGACAGCAATGAAATGTGTGTCCGATCAGAGCATTGACAGGCCGTCCATGGGCGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGACTGCAGAAGAGAGCGGCGAGGTAGGCAGCGGAATGGAAGTCGAAGGTCAGCTTGACGTTGCTTACAAAGGGAAGATGGATCCTGATGCTTCCCCTGGCATGGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAGGCCGAAGCCTCGCCAGTGAAGATTCCTACGGGTTGACACCCAGTACCGTCTTCTCACAGATCTTGAACCCAAAAGGTCGTTAG 2673 45.42 MKEIHHVRLAFASICVFVFLFFNVHVISAQNYIPRDFILLNCGGPSTADDMDGRKWMTDDKSKFLPAAGNSTTSRAATQVPSVLETPFMTTRVFHSNFTYTFPVAPTRLFLRLYFYPSSYGGLDASDARFSVSTQTHTLLNNFSASQTAEALNFPTIVKEYSINVENGRLSLTFTPSPTHPKAYAFVNGIEIVSMPDIYSETSGTVLIVGQSSPFTVDNTTALENIRRLNVGGNDISPSADTGMHRPWFDDSPYLFAAAKGVTTITEQNTRITYPPSISTYVAPVDIYSTARTMGPDSNVNLNYNLTWVFSVDSGFFYLVRLHFCEIDAGITKVNQRVFDIFIFNQTATLSVDVIESAGSNYAPMFKDYVVMVPSYGDPQKDLWLQLHPHKSSRPNYYDSILNGVEIFKINNSDANLAGPNPVPAAKQEIIDPSLAIPGSSHGKSKNRMAIIAGVVCGAVVLGLIIGFFVVAAKRRRGMDCISVTGQSGWLTLSVYGNSPLAETNADGSYASSLLSNRRHFSFAEIKAATREFDESLVLGVGGFGKVYKGEIDGETRKVAIKRGNPLSEQGVHEFQTEIDMLSKLRHRHLVSLIGYCEENCEMILVYDYMSHGTLREHLYKSHNPPLSWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPSLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLPKEEVSLAEWAAHCYIKGVLDQIIDTFLKGKIASECLKKFAETAMKCVSDQSIDRPSMGDVLWNLEFALQLQETAEESGEVGSGMEVEGQLDVAYKGKMDPDASPGMDGNITDSRSTGISMSIGGRSLASEDSYGLTPSTVFSQILNPKGR 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6686722 6689394 - CmaCh07G012170.1 Cma07g01217 298532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01217 890 Gene3D Phosphorylase Kinase; domain 1 501 609 - -
Cma07g01217 890 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Cma07g01217 890 ProSiteProfiles Protein kinase domain profile. 533 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01217 890 PANTHER - 22 853 - -
Cma07g01217 890 Pfam Malectin-like domain 40 410 IPR024788 -
Cma07g01217 890 Pfam Protein tyrosine and serine/threonine kinase 538 801 IPR001245 GO:0004672|GO:0006468
Cma07g01217 890 PANTHER OS07G0166700 PROTEIN 22 853 IPR045272 GO:0004714|GO:0006468
Cma07g01217 890 Gene3D Transferase(Phosphotransferase) domain 1 610 825 - -
Cma07g01217 890 SUPERFAMILY Protein kinase-like (PK-like) 509 807 IPR011009 -
Cma07g01217 890 Gene3D - 37 196 - -
Cma07g01217 890 Gene3D - 223 411 - -
Cma07g01217 890 CDD STKc_IRAK 539 805 - -
Cma07g01217 890 SMART serkin_6 533 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g01217 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01217 Cma-Chr7:6686722 Cma12g01130 Cma-Chr12:8913915 0 dispersed
Cma03g00288 Cma-Chr3:3805129 Cma07g01217 Cma-Chr7:6686722 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68720 PF12819 Malectin_like 1.10E-40 CL0202 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01217 - - cpep:111781600 1655.19