Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g01319 | ATGCTAAGGGCTGCTTCGTTATTGCAATTGAGGTGGATTTCTGCTCCCCCATGGGAGTCTTATGCTTCTCTTCGTCCGACAATCATAGGATTTCACCGTAATCGTAGAAACTTAGAATCTGATCGGTACTCAACAATGACGATCACCCCGAAGATTTCCGTTAACGATGGCAACTTGGTGGTTCACGGAAAGACCATACTGACTGGAGTGCCTGACAACATTGTGCTGACCCCAGGATCAGGCCCTGGACTTGTTGCTGGTGCATTCATTGGTGCCACTGCCTCACACAGTAAAAGTCTGCACGTTTTCCCCATCGGTGTCTTAGAGGGTCAGCGCTTCCTGTGTTGTTTCCGTTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACGTCTGGGAAAGACATCCCTTTTGAGACCCAGTTCCTGCTCATGGAGAGCAAGGGTGCTGATGGGGAGGATCCTGATAATTCTTCGATCATCTACACTGTCTTCCTTCCTCTCCTTGAAGGCCAGTTCCGTGCTGCGCTGCAGGGCAATGACAAGAACGAGATGGAGATTTGCCTCGAGAGTGGAGATAATACTGTTGAGACCAACCAAGGACTCTCTCTGGTCTATATGCATGCTGGGACAAATCCCTTTGAAGTTATCAATCAAGCAGTGAAGGCTGTTGAAAATCATATGCAAACATTTCTACACAGAGAGAAGAAGAAGTTACCTTCCTTCCTCGACTGGTTTGGTTGGTGTACTTGGGATGCCTTTTACACCGATGTCACTGCTGAGGGTGTTGACGAGGGTCTCAGAAGCCTATCAGGTGGAGGGGCACCTCCAAAATTTTTAATCATAGATGATGGTTGGCAACAGATAGAGAGCAAACCAAAGGATGCTACTGATTGTGTTGTACAAGAAGGAGCACAGTTTGCGAGTAGGCTGTCTGGAATAAAAGAGAACCAAAAGTTTCAGAAAAATGGGAAAAACAATGTACAGGTCCCTGGCCTGAAGGTGGTTGTTGATGATGCCAAGCAACAACACAATGTGAAATTTGTGTATGCTTGGCATGCTTTAGCTGGTTATTGGGGTGGAGTGAAACCAGCAGGTCCAGGCATGGAGCACTATGAGTCTGCTTTGGCATACCCGGTCCAGTCACCGGGTATGTTGGGCAACCAACCAGACATAGTTGTAGACAGTCTGGCTGTTCACGGCATTGGCCTTGTGCATCCAAAAAAAGTCTTTAATTTCTATAATGAGCTTCATTCCTACTTGGCTTCATGTGGAGTGGATGGTGTAAAGGTTGATGTGCAGAACATTATCGAGACCCTCGGTGCTGGTTATGGTGGCAGGGTTCAACTCACTCGTAGCTACCATCAGGCCCTCGAAGCTTCTATTGCTCGAAACTTTACCGACAATGGATGTATTTCCTGTATGTGCCATAACACTGATGGTCTTTACAGTGCCAAACAGACTGCGGTCGTGAGAGCTTCTGATGACTATTACCCTCACGATCCTGCCTCCCACACCATTCATATTTCCTCTGTGGCTTACAATTCTCTTTTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACATCCCACAGCTGAGTATCACGGAGCTGCTCGTGCGATTGGTGGAGGTGCAATCTATGTCAGTGACAAGCCAGGCAACCACAACTTTGAGCTGTTGAGGAAGCTAGTTCTTCCCGACGGATCAGTTCTTCGTGCCCAGTTACCTGGACGACCAACAAGTGATTCTCTGTTCAACGATCCAGCTCGAGATGGAACCAGTCTGCTCAAAGTTTGGAATATGAACAAGTGCTCTGGTGTTGTTGGAGTATTCAATTGCCAAGGAGCTGGCTGGTGCAGGATCACAAAGAAGACTCGCATTCACGACGAGTCTCCTGGTACCCTCACCGCCTCTGTCCGTGCAGCCGATGTCGATGCTATTTCGCAAATTGCTGGTGCCGATTGGAAGGGAGATACTATTGTTTACGCCTATCGATCAGGGGAGGTAATTCGATTGCCAAAAGGCGCCTCGGTTCCAGTTACACTCAAAGTATTGGAATATGATCTTTTCCATATTTCCCCTCTAAAGGACATCACCTCGAACATCTCTTTCGCGCCAATTGGGCTGCTCGACATGTTCAATACTGGTGGTGCTATTGAGCAAGTTGATGTCCAATTGGTCGAAGCAACGCCCGAGTTCAACAGTGAAGTTGCCTCCGAGCTGACAGGTTCTCTCCCCAACGATCGACGCCCGACAGCTACAATTACTCTAAAAGCCCGAGGATGTGGAAGGTTCGGCATTTACTCATCTCAACGAGCTTTGAAATGTAGTGTAGACAAAGCCAATAGTGACTTTGCCTACGATGAGGCAACAGGGTTAGTCACATTTGCGCTCCCTATCCCGACAGTAGAAATGTATAGATGGAGCATTGAAATTCAGTTGGTGACCAAAACCATCCATCCATCTCCACATCCCCCAACTCACAAAGTGGTTACCACGCGCGCCGCCTCACGGTTGCAATGCCAGTGGCATTTACGATCTTCGAGTGGACCAGCTTCCATGGAGGTCGACGCTAATTCAGGGAAATCGTCGAAACAGATTGGGAGTGGTCAGGTTTGTCAGATCTGCAGCGATTCCGTCGGCACCACGGCCGATGGCGAGCCGTTTGTTGCGTGTGATGTTTGTGCATTTCCGGTTTGCCGTCCTTGTTACGAGTACGAGAGGAAAGATGGGAATCAGTCTTGCCCTCAGTGCAAAACCAAATACAAGTGGCATAAAGGAAGTCCTCCGGTTAATGGAGAAGCAGTGGAAGATGGGGATGGTAATGGAGTGACGGGGGCTCAAGAAAGGCACCATAAGTTACCTGAGCGCACTCTTAGCTGGGATACCAACTATGATAAGGAGGGATCCTTTAATCATATTCCTTTGCTTACCACTGGACGATCTGTTTCTGGAGAACTATCAGCTGCATCTCCCGAGCGGCTCTCCATGGCGTCTCCTGAAAGTGGGAGCAGGGCTAACTATAGAATCATGGATCAATCGAGAGATTCGGGATCGGCTAGGTTTGGCAATGTGGCTTGGAAAGAGAGAATTGATAGTTGGAAGGTGAAGCAGGACAAAAGTGTGCCGCCAATGAGTGTTAGTCATGCACCTTCTGAAGGTCGGGGTGGTGCAGATTTCGATGCCAGCACCGATGTCATGATCGATGATTCTTTACTAAACGATGAAGCCCGTCAACCTCTTTCGAGGAAGGTTTCTATTCCGTCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGACTTGTTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCAAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAAATATGGTTTGCTGTATCTTGGATTTTGGATCAATTCCCCAAATGGCTTCCAGTCAATCGCGAGACATATCTTGATAGACTTGCTCTACGATATGATCGTGAAGGAGAGCCATCTCAGTTGGCTGCTGTTGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAGCCTCCCCTTGTCACAGCTAATACGGTCCTATCAATTCTCGCTGTGGACTATCCAGTTGATAAAGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTAACATTTGAAGCATTGTCTGAAACGTCAGAATTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAATACAGCATTGAGCCACGAGCACCAGAGTGGTATTTTGCTCAGAAGATCGATTACTTAAAGGACAAGGTTCACCCATCGTTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATATGAGGAGTTTAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGATGGGTCATGCAAGATGGTACACCATGGCCTGGAAACAACACTAGAGATCATCCAGGAATGATTCAGGTTTTCTTAGGGCACAGTGGAGGACTTGATACTGAGGGTAATGAGCTTCCTCGTTTAGTTTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTTTCTGCTGTTCTTACCAATGGACCTTTCTTGTTAAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTACGGGAAGCTATGTGCTTTATGATGGATCCTAATCTTGGAAAATCAGTGTGTTACGTTCAGTTTCCTCAGAGGTTTGATGGGATTGATAGAAACGATCGATACGCCAATCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTATGTGGGAACGGGATGTGTCTTCAATCGAACTGCATTGTACGGCTATGAACCCCCCCTCAAGCCTAAGCATAAAAAACCCGGGGTCTTCTCCAGTTGCTTTGGGAAATCAAAAAAGAAAAGTTCTAAATCTAAAAGGAAGGATTCTGATAAAAAGCAATCAAATAAAAACGTCGATCCCACTGTGCCGATATTCAACCTCGAGGATATCGAGGAAGGTGTTGAAGGTGCTGGATTTGACGATGAGAAGTCGCTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTTGTTGCTTCCACACTGATGGAGAATGGTGGCGTGCCGCAGTCTGCCACCCCGGAATCTCTTCTTAAGGAAGCAATTCACGTCATCAGTTGCGGATACGAGGATAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAAGATATTTTGACAGGGTTCAAAATGCACGCCCGTGGTTGGAGATCGATCTATTGCATACCTGACCGTCCTGCATTTAAAGGTTCTGCGCCTATTAATCTTTCCGATCGTCTAAACCAAGTGCTTCGATGGGCGCTAGGTTCAGTCGAAATTCTTTTCAGTCGGCATTGCCCGATGTGGTACGGTTATAGTGGACGCCTGAAATGGCTCGAGAGATTTGCTTATGTTAACACCACCATTTACCCAATTACATCCATTCCTCTCCTTGCCTATTGTACCTTGCCTGCAATATGTCTGCTCACCGGAAAGTTCATTATTCCTCAGATTAGTAATCTTGCCAGTATTTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGTGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTTTGGGTTATCGGAGGTGTGTCGGCCCATCTGTTTGCTGTGTTCCAAGGTCTACTTAAAGTTCTTGCTGGAATTGATACGAACTTCACGGTTACTTCGAAAGCATCCGACGAAGATGGAGATTTTGCTGAGCTCTACATGTTCAAGTGGACCACTCTTCTCATTCCCCCCACTACTCTCCTCATTATCAACATAGTTGGAGTTGTTGCTGGAATTTCTTACGCCATTAACAGTGGCTATCAATCTTGGGGTCCCCTTTTCGGCAAGCTGTTCTTCGCTTTCTGGGTGATTATCCATCTGTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCGACGATCGTGGTTGTATGGTCCATCCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGGATTGATCCCTTCACAACCCGAGTAACTGGCCCCGACGTCGAACAGTGTGGAATCAACTGCTAA | 5724 | 46.59 | MLRAASLLQLRWISAPPWESYASLRPTIIGFHRNRRNLESDRYSTMTITPKISVNDGNLVVHGKTILTGVPDNIVLTPGSGPGLVAGAFIGATASHSKSLHVFPIGVLEGQRFLCCFRFKLWWMTQRMGTSGKDIPFETQFLLMESKGADGEDPDNSSIIYTVFLPLLEGQFRAALQGNDKNEMEICLESGDNTVETNQGLSLVYMHAGTNPFEVINQAVKAVENHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLRSLSGGGAPPKFLIIDDGWQQIESKPKDATDCVVQEGAQFASRLSGIKENQKFQKNGKNNVQVPGLKVVVDDAKQQHNVKFVYAWHALAGYWGGVKPAGPGMEHYESALAYPVQSPGMLGNQPDIVVDSLAVHGIGLVHPKKVFNFYNELHSYLASCGVDGVKVDVQNIIETLGAGYGGRVQLTRSYHQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDYYPHDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPTAEYHGAARAIGGGAIYVSDKPGNHNFELLRKLVLPDGSVLRAQLPGRPTSDSLFNDPARDGTSLLKVWNMNKCSGVVGVFNCQGAGWCRITKKTRIHDESPGTLTASVRAADVDAISQIAGADWKGDTIVYAYRSGEVIRLPKGASVPVTLKVLEYDLFHISPLKDITSNISFAPIGLLDMFNTGGAIEQVDVQLVEATPEFNSEVASELTGSLPNDRRPTATITLKARGCGRFGIYSSQRALKCSVDKANSDFAYDEATGLVTFALPIPTVEMYRWSIEIQLVTKTIHPSPHPPTHKVVTTRAASRLQCQWHLRSSSGPASMEVDANSGKSSKQIGSGQVCQICSDSVGTTADGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVNGEAVEDGDGNGVTGAQERHHKLPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVMIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKERRAMKREYEEFKIRVNGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGVFSSCFGKSKKKSSKSKRKDSDKKQSNKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYSGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC | 1907 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7466028 | 7476774 | + | CmaCh07G013190.1 | Cma07g01319 | 298634 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g01319 | 1907 | Pfam | Cellulose synthase | 1179 | 1900 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Cma07g01319 | 1907 | Gene3D | Aldolase class I | 244 | 564 | IPR013785 | - | |
Cma07g01319 | 1907 | ProSiteProfiles | Zinc finger RING-type profile. | 877 | 923 | IPR001841 | - | |
Cma07g01319 | 1907 | SUPERFAMILY | (Trans)glycosidases | 241 | 568 | IPR017853 | - | |
Cma07g01319 | 1907 | MobiDBLite | consensus disorder prediction | 1480 | 1513 | - | - | |
Cma07g01319 | 1907 | PANTHER | CELLULOSE SYNTHASE | 867 | 1907 | - | - | |
Cma07g01319 | 1907 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 1193 | 1716 | IPR029044 | - | |
Cma07g01319 | 1907 | Pfam | Zinc-binding RING-finger | 873 | 943 | IPR027934 | - | |
Cma07g01319 | 1907 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 859 | 950 | IPR013083 | - | |
Cma07g01319 | 1907 | SUPERFAMILY | RING/U-box | 865 | 944 | - | - | |
Cma07g01319 | 1907 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1298 | 1470 | IPR029044 | - | |
Cma07g01319 | 1907 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 867 | 1907 | - | - | |
Cma07g01319 | 1907 | CDD | mRING-HC-C4C4_CesA_plant | 875 | 925 | - | - | |
Cma07g01319 | 1907 | Pfam | Raffinose synthase or seed imbibition protein Sip1 | 52 | 801 | IPR008811 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00073 | Cma07g01319 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01497 | Cma-Chr1:10519143 | Cma07g01319 | Cma-Chr7:7466028 | 0 | dispersed | |
Cma06g01393 | Cma-Chr6:9025320 | Cma07g01319 | Cma-Chr7:7466028 | 1.06E-146 | dispersed | |
Cma07g01319 | Cma-Chr7:7466028 | Cma09g00468 | Cma-Chr9:2053465 | 0 | dispersed | |
Cma09g01040 | Cma-Chr9:5380242 | Cma07g01319 | Cma-Chr7:7466028 | 0 | dispersed | |
Cma10g00528 | Cma-Chr10:2419638 | Cma07g01319 | Cma-Chr7:7466028 | 0 | dispersed | |
Cma11g00448 | Cma-Chr11:2192739 | Cma07g01319 | Cma-Chr7:7466028 | 0 | dispersed | |
Cma11g00525 | Cma-Chr11:2524035 | Cma07g01319 | Cma-Chr7:7466028 | 0 | dispersed | |
Cma13g00869 | Cma-Chr13:7104403 | Cma07g01319 | Cma-Chr7:7466028 | 1.40E-159 | dispersed | |
Cma03g00073 | Cma-Chr3:665926 | Cma07g01319 | Cma-Chr7:7466028 | 0 | transposed | |
Cma08g00528 | Cma-Chr8:3045951 | Cma07g01319 | Cma-Chr7:7466028 | 0 | transposed | |
Cma10g00084 | Cma-Chr10:348534 | Cma07g01319 | Cma-Chr7:7466028 | 0 | transposed | |
Cma17g01379 | Cma-Chr17:9205889 | Cma07g01319 | Cma-Chr7:7466028 | 0 | transposed | |
Cma03g00072 | Cma-Chr3:655840 | Cma07g01319 | Cma-Chr7:7466028 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g01319 | K10999 | - | csv:101211779 | 2100.09 |