Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01319 ATGCTAAGGGCTGCTTCGTTATTGCAATTGAGGTGGATTTCTGCTCCCCCATGGGAGTCTTATGCTTCTCTTCGTCCGACAATCATAGGATTTCACCGTAATCGTAGAAACTTAGAATCTGATCGGTACTCAACAATGACGATCACCCCGAAGATTTCCGTTAACGATGGCAACTTGGTGGTTCACGGAAAGACCATACTGACTGGAGTGCCTGACAACATTGTGCTGACCCCAGGATCAGGCCCTGGACTTGTTGCTGGTGCATTCATTGGTGCCACTGCCTCACACAGTAAAAGTCTGCACGTTTTCCCCATCGGTGTCTTAGAGGGTCAGCGCTTCCTGTGTTGTTTCCGTTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACGTCTGGGAAAGACATCCCTTTTGAGACCCAGTTCCTGCTCATGGAGAGCAAGGGTGCTGATGGGGAGGATCCTGATAATTCTTCGATCATCTACACTGTCTTCCTTCCTCTCCTTGAAGGCCAGTTCCGTGCTGCGCTGCAGGGCAATGACAAGAACGAGATGGAGATTTGCCTCGAGAGTGGAGATAATACTGTTGAGACCAACCAAGGACTCTCTCTGGTCTATATGCATGCTGGGACAAATCCCTTTGAAGTTATCAATCAAGCAGTGAAGGCTGTTGAAAATCATATGCAAACATTTCTACACAGAGAGAAGAAGAAGTTACCTTCCTTCCTCGACTGGTTTGGTTGGTGTACTTGGGATGCCTTTTACACCGATGTCACTGCTGAGGGTGTTGACGAGGGTCTCAGAAGCCTATCAGGTGGAGGGGCACCTCCAAAATTTTTAATCATAGATGATGGTTGGCAACAGATAGAGAGCAAACCAAAGGATGCTACTGATTGTGTTGTACAAGAAGGAGCACAGTTTGCGAGTAGGCTGTCTGGAATAAAAGAGAACCAAAAGTTTCAGAAAAATGGGAAAAACAATGTACAGGTCCCTGGCCTGAAGGTGGTTGTTGATGATGCCAAGCAACAACACAATGTGAAATTTGTGTATGCTTGGCATGCTTTAGCTGGTTATTGGGGTGGAGTGAAACCAGCAGGTCCAGGCATGGAGCACTATGAGTCTGCTTTGGCATACCCGGTCCAGTCACCGGGTATGTTGGGCAACCAACCAGACATAGTTGTAGACAGTCTGGCTGTTCACGGCATTGGCCTTGTGCATCCAAAAAAAGTCTTTAATTTCTATAATGAGCTTCATTCCTACTTGGCTTCATGTGGAGTGGATGGTGTAAAGGTTGATGTGCAGAACATTATCGAGACCCTCGGTGCTGGTTATGGTGGCAGGGTTCAACTCACTCGTAGCTACCATCAGGCCCTCGAAGCTTCTATTGCTCGAAACTTTACCGACAATGGATGTATTTCCTGTATGTGCCATAACACTGATGGTCTTTACAGTGCCAAACAGACTGCGGTCGTGAGAGCTTCTGATGACTATTACCCTCACGATCCTGCCTCCCACACCATTCATATTTCCTCTGTGGCTTACAATTCTCTTTTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACATCCCACAGCTGAGTATCACGGAGCTGCTCGTGCGATTGGTGGAGGTGCAATCTATGTCAGTGACAAGCCAGGCAACCACAACTTTGAGCTGTTGAGGAAGCTAGTTCTTCCCGACGGATCAGTTCTTCGTGCCCAGTTACCTGGACGACCAACAAGTGATTCTCTGTTCAACGATCCAGCTCGAGATGGAACCAGTCTGCTCAAAGTTTGGAATATGAACAAGTGCTCTGGTGTTGTTGGAGTATTCAATTGCCAAGGAGCTGGCTGGTGCAGGATCACAAAGAAGACTCGCATTCACGACGAGTCTCCTGGTACCCTCACCGCCTCTGTCCGTGCAGCCGATGTCGATGCTATTTCGCAAATTGCTGGTGCCGATTGGAAGGGAGATACTATTGTTTACGCCTATCGATCAGGGGAGGTAATTCGATTGCCAAAAGGCGCCTCGGTTCCAGTTACACTCAAAGTATTGGAATATGATCTTTTCCATATTTCCCCTCTAAAGGACATCACCTCGAACATCTCTTTCGCGCCAATTGGGCTGCTCGACATGTTCAATACTGGTGGTGCTATTGAGCAAGTTGATGTCCAATTGGTCGAAGCAACGCCCGAGTTCAACAGTGAAGTTGCCTCCGAGCTGACAGGTTCTCTCCCCAACGATCGACGCCCGACAGCTACAATTACTCTAAAAGCCCGAGGATGTGGAAGGTTCGGCATTTACTCATCTCAACGAGCTTTGAAATGTAGTGTAGACAAAGCCAATAGTGACTTTGCCTACGATGAGGCAACAGGGTTAGTCACATTTGCGCTCCCTATCCCGACAGTAGAAATGTATAGATGGAGCATTGAAATTCAGTTGGTGACCAAAACCATCCATCCATCTCCACATCCCCCAACTCACAAAGTGGTTACCACGCGCGCCGCCTCACGGTTGCAATGCCAGTGGCATTTACGATCTTCGAGTGGACCAGCTTCCATGGAGGTCGACGCTAATTCAGGGAAATCGTCGAAACAGATTGGGAGTGGTCAGGTTTGTCAGATCTGCAGCGATTCCGTCGGCACCACGGCCGATGGCGAGCCGTTTGTTGCGTGTGATGTTTGTGCATTTCCGGTTTGCCGTCCTTGTTACGAGTACGAGAGGAAAGATGGGAATCAGTCTTGCCCTCAGTGCAAAACCAAATACAAGTGGCATAAAGGAAGTCCTCCGGTTAATGGAGAAGCAGTGGAAGATGGGGATGGTAATGGAGTGACGGGGGCTCAAGAAAGGCACCATAAGTTACCTGAGCGCACTCTTAGCTGGGATACCAACTATGATAAGGAGGGATCCTTTAATCATATTCCTTTGCTTACCACTGGACGATCTGTTTCTGGAGAACTATCAGCTGCATCTCCCGAGCGGCTCTCCATGGCGTCTCCTGAAAGTGGGAGCAGGGCTAACTATAGAATCATGGATCAATCGAGAGATTCGGGATCGGCTAGGTTTGGCAATGTGGCTTGGAAAGAGAGAATTGATAGTTGGAAGGTGAAGCAGGACAAAAGTGTGCCGCCAATGAGTGTTAGTCATGCACCTTCTGAAGGTCGGGGTGGTGCAGATTTCGATGCCAGCACCGATGTCATGATCGATGATTCTTTACTAAACGATGAAGCCCGTCAACCTCTTTCGAGGAAGGTTTCTATTCCGTCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGACTTGTTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCAAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAAATATGGTTTGCTGTATCTTGGATTTTGGATCAATTCCCCAAATGGCTTCCAGTCAATCGCGAGACATATCTTGATAGACTTGCTCTACGATATGATCGTGAAGGAGAGCCATCTCAGTTGGCTGCTGTTGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAGCCTCCCCTTGTCACAGCTAATACGGTCCTATCAATTCTCGCTGTGGACTATCCAGTTGATAAAGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTAACATTTGAAGCATTGTCTGAAACGTCAGAATTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAATACAGCATTGAGCCACGAGCACCAGAGTGGTATTTTGCTCAGAAGATCGATTACTTAAAGGACAAGGTTCACCCATCGTTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATATGAGGAGTTTAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGATGGGTCATGCAAGATGGTACACCATGGCCTGGAAACAACACTAGAGATCATCCAGGAATGATTCAGGTTTTCTTAGGGCACAGTGGAGGACTTGATACTGAGGGTAATGAGCTTCCTCGTTTAGTTTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTTTCTGCTGTTCTTACCAATGGACCTTTCTTGTTAAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTACGGGAAGCTATGTGCTTTATGATGGATCCTAATCTTGGAAAATCAGTGTGTTACGTTCAGTTTCCTCAGAGGTTTGATGGGATTGATAGAAACGATCGATACGCCAATCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTATGTGGGAACGGGATGTGTCTTCAATCGAACTGCATTGTACGGCTATGAACCCCCCCTCAAGCCTAAGCATAAAAAACCCGGGGTCTTCTCCAGTTGCTTTGGGAAATCAAAAAAGAAAAGTTCTAAATCTAAAAGGAAGGATTCTGATAAAAAGCAATCAAATAAAAACGTCGATCCCACTGTGCCGATATTCAACCTCGAGGATATCGAGGAAGGTGTTGAAGGTGCTGGATTTGACGATGAGAAGTCGCTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTTGTTGCTTCCACACTGATGGAGAATGGTGGCGTGCCGCAGTCTGCCACCCCGGAATCTCTTCTTAAGGAAGCAATTCACGTCATCAGTTGCGGATACGAGGATAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAAGATATTTTGACAGGGTTCAAAATGCACGCCCGTGGTTGGAGATCGATCTATTGCATACCTGACCGTCCTGCATTTAAAGGTTCTGCGCCTATTAATCTTTCCGATCGTCTAAACCAAGTGCTTCGATGGGCGCTAGGTTCAGTCGAAATTCTTTTCAGTCGGCATTGCCCGATGTGGTACGGTTATAGTGGACGCCTGAAATGGCTCGAGAGATTTGCTTATGTTAACACCACCATTTACCCAATTACATCCATTCCTCTCCTTGCCTATTGTACCTTGCCTGCAATATGTCTGCTCACCGGAAAGTTCATTATTCCTCAGATTAGTAATCTTGCCAGTATTTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGTGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTTTGGGTTATCGGAGGTGTGTCGGCCCATCTGTTTGCTGTGTTCCAAGGTCTACTTAAAGTTCTTGCTGGAATTGATACGAACTTCACGGTTACTTCGAAAGCATCCGACGAAGATGGAGATTTTGCTGAGCTCTACATGTTCAAGTGGACCACTCTTCTCATTCCCCCCACTACTCTCCTCATTATCAACATAGTTGGAGTTGTTGCTGGAATTTCTTACGCCATTAACAGTGGCTATCAATCTTGGGGTCCCCTTTTCGGCAAGCTGTTCTTCGCTTTCTGGGTGATTATCCATCTGTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCGACGATCGTGGTTGTATGGTCCATCCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGGATTGATCCCTTCACAACCCGAGTAACTGGCCCCGACGTCGAACAGTGTGGAATCAACTGCTAA 5724 46.59 MLRAASLLQLRWISAPPWESYASLRPTIIGFHRNRRNLESDRYSTMTITPKISVNDGNLVVHGKTILTGVPDNIVLTPGSGPGLVAGAFIGATASHSKSLHVFPIGVLEGQRFLCCFRFKLWWMTQRMGTSGKDIPFETQFLLMESKGADGEDPDNSSIIYTVFLPLLEGQFRAALQGNDKNEMEICLESGDNTVETNQGLSLVYMHAGTNPFEVINQAVKAVENHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLRSLSGGGAPPKFLIIDDGWQQIESKPKDATDCVVQEGAQFASRLSGIKENQKFQKNGKNNVQVPGLKVVVDDAKQQHNVKFVYAWHALAGYWGGVKPAGPGMEHYESALAYPVQSPGMLGNQPDIVVDSLAVHGIGLVHPKKVFNFYNELHSYLASCGVDGVKVDVQNIIETLGAGYGGRVQLTRSYHQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDYYPHDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPTAEYHGAARAIGGGAIYVSDKPGNHNFELLRKLVLPDGSVLRAQLPGRPTSDSLFNDPARDGTSLLKVWNMNKCSGVVGVFNCQGAGWCRITKKTRIHDESPGTLTASVRAADVDAISQIAGADWKGDTIVYAYRSGEVIRLPKGASVPVTLKVLEYDLFHISPLKDITSNISFAPIGLLDMFNTGGAIEQVDVQLVEATPEFNSEVASELTGSLPNDRRPTATITLKARGCGRFGIYSSQRALKCSVDKANSDFAYDEATGLVTFALPIPTVEMYRWSIEIQLVTKTIHPSPHPPTHKVVTTRAASRLQCQWHLRSSSGPASMEVDANSGKSSKQIGSGQVCQICSDSVGTTADGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVNGEAVEDGDGNGVTGAQERHHKLPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVMIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKERRAMKREYEEFKIRVNGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGVFSSCFGKSKKKSSKSKRKDSDKKQSNKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYSGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7466028 7476774 + CmaCh07G013190.1 Cma07g01319 298634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01319 1907 Pfam Cellulose synthase 1179 1900 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cma07g01319 1907 Gene3D Aldolase class I 244 564 IPR013785 -
Cma07g01319 1907 ProSiteProfiles Zinc finger RING-type profile. 877 923 IPR001841 -
Cma07g01319 1907 SUPERFAMILY (Trans)glycosidases 241 568 IPR017853 -
Cma07g01319 1907 MobiDBLite consensus disorder prediction 1480 1513 - -
Cma07g01319 1907 PANTHER CELLULOSE SYNTHASE 867 1907 - -
Cma07g01319 1907 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1193 1716 IPR029044 -
Cma07g01319 1907 Pfam Zinc-binding RING-finger 873 943 IPR027934 -
Cma07g01319 1907 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 859 950 IPR013083 -
Cma07g01319 1907 SUPERFAMILY RING/U-box 865 944 - -
Cma07g01319 1907 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1298 1470 IPR029044 -
Cma07g01319 1907 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 867 1907 - -
Cma07g01319 1907 CDD mRING-HC-C4C4_CesA_plant 875 925 - -
Cma07g01319 1907 Pfam Raffinose synthase or seed imbibition protein Sip1 52 801 IPR008811 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00073 Cma07g01319 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01497 Cma-Chr1:10519143 Cma07g01319 Cma-Chr7:7466028 0 dispersed
Cma06g01393 Cma-Chr6:9025320 Cma07g01319 Cma-Chr7:7466028 1.06E-146 dispersed
Cma07g01319 Cma-Chr7:7466028 Cma09g00468 Cma-Chr9:2053465 0 dispersed
Cma09g01040 Cma-Chr9:5380242 Cma07g01319 Cma-Chr7:7466028 0 dispersed
Cma10g00528 Cma-Chr10:2419638 Cma07g01319 Cma-Chr7:7466028 0 dispersed
Cma11g00448 Cma-Chr11:2192739 Cma07g01319 Cma-Chr7:7466028 0 dispersed
Cma11g00525 Cma-Chr11:2524035 Cma07g01319 Cma-Chr7:7466028 0 dispersed
Cma13g00869 Cma-Chr13:7104403 Cma07g01319 Cma-Chr7:7466028 1.40E-159 dispersed
Cma03g00073 Cma-Chr3:665926 Cma07g01319 Cma-Chr7:7466028 0 transposed
Cma08g00528 Cma-Chr8:3045951 Cma07g01319 Cma-Chr7:7466028 0 transposed
Cma10g00084 Cma-Chr10:348534 Cma07g01319 Cma-Chr7:7466028 0 transposed
Cma17g01379 Cma-Chr17:9205889 Cma07g01319 Cma-Chr7:7466028 0 transposed
Cma03g00072 Cma-Chr3:655840 Cma07g01319 Cma-Chr7:7466028 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01319 K10999 - csv:101211779 2100.09