Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g01364 ATGGGATCTTCTGTTGCTGCAATGGGCATGGTTTCCGACTCCAAATTCCATGTTCTTGCTGTTGATGACAGCGTCATCGATCGGAAATTGATTGAGCGTCTCCTTAAAACCTCCTCTTTTCAAGTAACTACGGTTGATTCTGGGAGTAAGGCTTTGGAGTTTTTGGGGTATGATCCTGGAAATAACTCGATTCCCTATGTTTCTCCTAGCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCAGGAAGTGGATGTGAATCTTGTTATTACTGATTACTGTATGCCTGGGATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGGTCCAAGGCTTTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTACCTGCAAGAATCAATAGATGTTTAGAAGAAGGAGCAGAAGAGTTCTTCTTGAAACCGGTCCGACTTTCGGACGTCAACAGGCTTAAACCCCACATGTTGAAAACGAAACTCAAATGTGACAAACCAGAAAGAACAGAGGAAGATGAGCCTGATTCAGGAAGCCAACCCCAAGCACCAGAGCAACAACATCATGAACAACATGAACAACATGAACAACATGAACATGGACAAGAAGAATTACGATCGCAACCGCAATCGCAGCAGGTGCCAACGCCACCGCAAGATCAAGATCAAGATCGATTGCAATCGGTACCGGTGTTACCAACGCCGCAACAGGAGCAAGAACAGTTGCAATTGCTCCAGCCAACACCGCCGCAACAATCGAACAACAACAAGAGGAAGGCAATGGAAGATGGACTTTCACCAGATAGAACAAGGCCTAGATACAGTGGTATTACAACCATGGTGTAG 870 46.09 MGSSVAAMGMVSDSKFHVLAVDDSVIDRKLIERLLKTSSFQVTTVDSGSKALEFLGYDPGNNSIPYVSPSHHHHHHHHHHHHHHHHHHQEVDVNLVITDYCMPGMTGYDLLKKIKGSKALRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDVNRLKPHMLKTKLKCDKPERTEEDEPDSGSQPQAPEQQHHEQHEQHEQHEHGQEELRSQPQSQQVPTPPQDQDQDRLQSVPVLPTPQQEQEQLQLLQPTPPQQSNNNKRKAMEDGLSPDRTRPRYSGITTMV 289
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 7780371 7782099 - CmaCh07G013640.1 Cma07g01364 298679
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma07g01364 289 ProSiteProfiles Response regulatory domain profile. 17 166 IPR001789 GO:0000160
Cma07g01364 289 MobiDBLite consensus disorder prediction 169 289 - -
Cma07g01364 289 MobiDBLite consensus disorder prediction 194 213 - -
Cma07g01364 289 SUPERFAMILY CheY-like 14 165 IPR011006 -
Cma07g01364 289 MobiDBLite consensus disorder prediction 69 88 - -
Cma07g01364 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 220 287 - -
Cma07g01364 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 11 211 - -
Cma07g01364 289 Gene3D - 17 279 - -
Cma07g01364 289 MobiDBLite consensus disorder prediction 66 89 - -
Cma07g01364 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR 220 287 IPR045279 GO:0009736
Cma07g01364 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 211 IPR045279 GO:0009736
Cma07g01364 289 MobiDBLite consensus disorder prediction 169 184 - -
Cma07g01364 289 CDD REC_typeA_ARR 18 161 - -
Cma07g01364 289 SMART REC_2 16 165 IPR001789 GO:0000160
Cma07g01364 289 Pfam Response regulator receiver domain 87 157 IPR001789 GO:0000160
Cma07g01364 289 MobiDBLite consensus disorder prediction 214 268 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma03g00130 Cma07g01364 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01600 Cma-Chr4:8080872 Cma07g01364 Cma-Chr7:7780371 5.72E-52 dispersed
Cma07g01364 Cma-Chr7:7780371 Cma14g00515 Cma-Chr14:2564303 1.31E-77 dispersed
Cma10g00154 Cma-Chr10:701443 Cma07g01364 Cma-Chr7:7780371 4.05E-48 dispersed
Cma03g00130 Cma-Chr3:1360782 Cma07g01364 Cma-Chr7:7780371 4.41E-134 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35451 PF00072 Response_reg 4.90E-14 CL0304 Cma TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g01364 K14492 - csv:101220999 397.897