Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00036 ATGGACGACTCCACATTCCTGTATTCAGTTCTCTGCATTGCTCTCGTGGTTGCCATAAGCTATGCTTTGAAACCAAAGTCCCGCAAAAATCTCCCTCCAACGCCACCCTCTATCCCAATTATAGGCCATCTCCATCTCCTCAAGCCCCCAGTTCACAGAAGCTTATTAACTCTCTCACAAAAGTATGGCCCAGTGCTTTCCCTTCGTTTCGGCTCCCGTTTAGTTGTTGTTGTCTCGTCCATCGACGCAGCCGAAGAATGCTTCACGAAAAATGATGTCGTTTTCGCTAACCGTCCAGACTTTGCTGTGAGTAAGTGCTTGAGTTACAACCACACCACCCTTGGAGCCGCTCCCTATGGTGACCACTGGCGAAAACTTCGCCGAGTGAGCGCTCTCGAAATACTGTCCGCCAATCGTCTCAACACGAATTCGGCCATTCGAAGAGATGAAGTGAGGAGATTGGTGAATAAATTATCTCAATCTTCGAGAGATGATTTTGCGAGAGTGGAGTTTAAATCCATGGTGAAAGAACTAACGCTGAATATAACGATGAGAATGGTGGCCGGAAAGCGGTATTATGGGGAAGAAACAAATGAAAGCAGTGAAGCCAGGACGTTTCGAGCTATTGTCAATGAGCTGTTCGAGTTCATGTTAGCGCAATATCCAGCCGACTTTTTGCCGATTTTGAAGTACATTGATTTCCAGGGCTTCATGAAGAGAGCCAAGAAGCTAATCAAACGGGTGGATGCATTTTGGCAAGGAATCGTTGATGAACATCGAACCAATCAAGTCCATAATCAAGAAATGGAGAATAGTATGGTTGCCCATTTCCTCAAGTTGCAGGAGTCGCAGCCTCAGTATTACACTGATGACATTATCAAAGGCCTCATTTTGACAATGGTACTTGGTGGCTCAGACACCACTGCCGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCAACGGTACTAAAGAAGGCAAGAGCTGAACTAGAGACTCAACTCGGAGATCAATTACTTGAAGAATCCGAGGTTCCAAAGTTAAGCTACCTACGATGTATAGTCCTCGAAACTCTTCGGTTGTACCCAGCTGGCCCACTCCTACTGCCACATAAGTCTTCTGCTGACTGTACATTATCAGGATACAACGTGCCACGTGACACGATCTTATTGGTGAACGCGTGGGCCATCCACAGGGATCCCACACTGTGGGAAGATCCAACAAGCTTTAGACCTGAGAGGTTTGAGGGTGGGGATAGCGAGGCCAATAGTAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGTCCAGGATCTGGAATGGCACATCGCGTGCTGGGATTGACTTTAGGACTGCTGATTCAATGTTTTGATTGGAAGAGCATTGATGGGAAGGAAGTCGATATGACGGAAGGAAAAGGTGTTAGCATGCCTAAAGCTGAACCACTTGAAGCTCTTTGTAAGCCACGACCAATCGCTAGCAAGCTGCTGCTTTGA 1506 46.61 MDDSTFLYSVLCIALVVAISYALKPKSRKNLPPTPPSIPIIGHLHLLKPPVHRSLLTLSQKYGPVLSLRFGSRLVVVVSSIDAAEECFTKNDVVFANRPDFAVSKCLSYNHTTLGAAPYGDHWRKLRRVSALEILSANRLNTNSAIRRDEVRRLVNKLSQSSRDDFARVEFKSMVKELTLNITMRMVAGKRYYGEETNESSEARTFRAIVNELFEFMLAQYPADFLPILKYIDFQGFMKRAKKLIKRVDAFWQGIVDEHRTNQVHNQEMENSMVAHFLKLQESQPQYYTDDIIKGLILTMVLGGSDTTAVTIEWAMSNLLNHPTVLKKARAELETQLGDQLLEESEVPKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTLSGYNVPRDTILLVNAWAIHRDPTLWEDPTSFRPERFEGGDSEANSKLMIAFGLGRRACPGSGMAHRVLGLTLGLLIQCFDWKSIDGKEVDMTEGKGVSMPKAEPLEALCKPRPIASKLLL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 187633 189481 + CmaCh08G000360.1 Cma08g00036 298731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00036 501 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 10 494 - -
Cma08g00036 501 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 SUPERFAMILY Cytochrome P450 32 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 494 - -
Cma08g00036 501 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Cma08g00036 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g00036 501 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00036 Cma-Chr8:187633 Cma20g00978 Cma-Chr20:5097701 0 dispersed
Cma17g01387 Cma-Chr17:9243802 Cma08g00036 Cma-Chr8:187633 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00036 K13260 K25487 csv:101208069 795.038