Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g00051 | ATGGCTTCTACTACCGGTCTTGTAGTTGGATCTTTTGTTTGGTTGGAGGATTCTGAAGAAGCTTGGATAGAGGGCGAAGTTTTAGAAATTCGTGGCGATGAAATTGAAGTCCTATGCACCTCGGGGAAGACGGTTGTAGTTAAAGCAGCCAATGTCTATCCCAAAGATTCCGAAGTGCCACCTTGCGGGGTGGATGACATGACCAAGTTGGCTTACTTACACGAACCAGGGGTGCTACACAATTTAAAATTGAGATATGATATCAACGAAATATATACTTATACGGGGAACATATTGATTGCGGTGAACCCTTTTACAAAGTTACCTCATCTCTATGATAGCTATATGATGGCACAATATAAAGGGGCTGCATTCGGTGAGCTGAGTCCACATCCATTTGCAGTTGCAGATGCTGCCTACAGACTTATGGTCAATGAGAAAAAAAGTCAATCCATATTGGTCAGTGGTGAAAGTGGGGCTGGAAAGACGGAAAGTACGAAGTTGCTTATGCGTTATCTTGCGTATATGGGAGGGAGAGCTGCTACTGAAGGGAGGTCTGTTGAGCAGCAAGTTTTGGAGTCAAATCCTGTTCTAGAAGCATTTGGGAATGCAAAGACGGTTCGAAACAACAACTCAAGTCGATTCGGTAAGTTTGTGGAGATCCAATTTGACCAAAGGGGAAGAATATCAGGAGCTGCTATCAGAACTTACTTGCTGGAAAGATCACGTGTTTGTCAGGTGTCAGATCCAGAGAGAAATTATCATTGCTTCTACATGCTTTGTGCTGCGCCACCTGAGGAGGTCAAGAAGTATAAATTGGGAAACCCAAGAGATTTCCATTATCTAAATCAATCAAATTGCTATGAGTTGGATGGAATTGATGATGCCAAGGAATATATTGCTACGAGAAAAGCAATGGAAGTCGTTGGAATAAGTTTGGATGAGCAGGATGGAATTTTTCGTGTCGTGGCTGCAATTCTTCATCTTGGAAACATAGAATTTGCAAAAGGGAAGGAGGCTGATTCTTCTGTTCCCAAAGATGAAAAATCTTGGTTCCATCTTAGAACTGCTGCTGAGCTTTTCATGTGTGATGAAAAGGCCCTGGAAGATTCTCTCTGCAAACGTGTGATCGTCACTCGTGATGAAACTATCACAAAGTGGCTGGATCCAAATTCTGCAGCTCTTAGCCGAGATGCTCTGGCAAAAATTGTATACTCTAGGTTGTTTGACTGGCTGGTGGACAAAATTAATAATTCAATTGGTCAGGACCCTGATTCAAAGTTCTTGATTGGAGTGCTGGATATCTATGGATTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGCATCAACTTGACTAATGAAAAGCTTCAGCAGCATTTCAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTACACTAAAGAGGAAATTGATTGGAGTTATATTGATTTTGTTGATAATCAAGATGTCCTTGATCTCATTGAAAAGAAACCTGGTGGTATCATTGCCCTTCTGGATGAAGCTTGTATGTTCCCCAGATCAACTCATGAAACATTTGCTCAAAAGTTGTATCAGACATTCAAAAACCATAAACGCTTCAGCAAACCAAAATTAGCCCGGAGTGACTTCACAATTGCTCATTATGCTGGTGATGTCACCTATCAGACTGATTTATTTCTGGACAAAAATAAAGACTACGTTGTTGCTGAACATCAAGCGCTCTTGGGTGCCTCCAAATGCTCCTTTGTGTCGTGTTTGTTTCCTCCATTAGCTGAAGAATCATCCAAATCTTCGAAGTTCTCATCAATAGGCTCTCGTTTCAAGCTGCAATTGGTAGCACTTCTGGAAACTCTAAGTGCTACTGAGCCCCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTTCTATCTTCGAGAATAAAAATATATTACAACAATTACGTTGTGGGGGAGTCATGGAGGCAATTAGGATAAGTTGTGCTGGTTTTCCAACAAGGAAAACATTTGATGAATTTGTTGACCGATTTGGACTCCTTGCACCCGAAGTTTTGGATGGAAGTTCTGATGAAGTGGCTGCTTGCAAGAGGCTTCTAGAGAAGGTTGGACTTAAAGGATACCAGATCGGCAAGACAAAAGTCTTTCTTAGAGCTGGTCAGATGGCTGAACTTGATGCACTCAGGACTGAGATTTTAGGGAGATCTGCAAGTATTATTCAGCGGAAAGTTCGTTCTTATTTGGCACGTAGAAGTTTTGTGTTGCTTCGGAGGTCAGCTACACATCTACAATCTGCATGTAGAGGACAACTTGCTCGACAAGTATTTGAGGGCATGAGGAGAGAAGCTTCTTCTATAATGATTCAAAGGAATTTGTGCATGCATATCTGCAGGAAAGCTTACAAAGAAAAGTACTCTTCAGCTGTTTCTATTCAAACTGGAATGCGTGGAATGGCTGCTCGCAATGAGCTACGCTTCAGAAGGCGGTCTAAAGCAGCAATTATTATTCAGAGCTACTGTCGTAGATATTTGGCTCAGCTGCACTATAAGAAGTTAAAGAAAGCAGCAATCACCACACAATCTGCATGGAGAGGAAGAGTTGCTCGTAAGGAACTACGGAAACTGAAGATGGCTGCAAAGGAAACAGGAGCTCTTCAAGCTGCGAAAAATAAATTGGAAAAGCAAGTCGAAGAATTAATGTGGAGACTGCAGTTGGAGAAGCGCATGAGGGCTGATTTGGAAGAAGCTAAAACACAAGAAAACGAGAAGCTGCAATCTGCTTTGCAAGATATGCAGCTTCAGTTGAAAGAAACAAGAACGATGTTCGAGAAGGAACGAGAAGCTGCAAAGAAGGCTGCTGATATTATTCCAATTGTGAAGGAGGTTCCAGTTATTGATAATGCGATAATCGAGAAAATTTCTGGTGAAAACGAAAAGCTCAAGGCGTTGGTATGTTCACTGGAAAAGAAAATTGGCGAAACAGAGAAAAAATATGAAGAGGCGAACAGAGTTAGTGAAGAACGGTTGAAGCAAGCATCAGAGGCCGAAACAAAAATTATTCAGTTAAAGACTGCAATGCAGAGGCTTGAACAAAAATTCTCAAATATTGAATCTCAAAATCAGATTCTTCGCCAGCAGACCTTCATGACAACACCAGTAAAAAAAATGGCTGACCATCTTCCTATTGCAGTAGCAGAGAAATTGGAGAACGGTAGCCATTTGATTGAAGATAACAAAATCGATGAGCAGCTCGTAACACCCGTGAAAGCGCTGAAGAGAATTAGCTCAGAATCTGAAATTAAGTTGAGTCGACCTCTTTTCGAAAATCAACACGAGAATGTTGATGCTCTTGTCAGTTGTGTCATGAACAACATTGGGTTCAGTAATGGGAAGCCTGTAGCTGCCTTTACCATTTATAAATGTCTTCTTCACTGGAAATCTTTCGAAGCCGAAAAAACAAGTGTGTTTGATCGCCTAATTCAGATGATTGGATCTGCAATAGAGAATCAAGATAACAATGATCATCTAGCCTATTGGTTGTCGAACACATCTGGGCTACTGTTCTTGCTTCAAAGAAGCTTGAAAGCTGCCGGTGCTCCCCGAAAACCGCCAACTTCAACATCCTTATTTGGAAGGATGACTATGGGTTTTCGTTCGTCTCCTTCTTCCAACAGTCTTGGATCTGCGCTTAAGGTCGTGCGCCAAGTGGATGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGTTGACAGCATATGTTGAAAAAATATTCGGAATTATCCGAGATAACTTGAAGAAGGAGTTGACATCATTGCTTTCCTTGTGTATCCAAGTACCAAGAACATCAAAGGGAGTATTACGATCGGGAAGATCATTTGGAAAAGATACTCAAACAAATTACTGGCAAAGCATCATAGAATGCCTCAACATGCTTCTCTGTACATTGAAAGAAAATTTTGTTCCGCAAATACTTACCCAGAATATCTTTGTTCAAAACTTTTCATACATTAATGTTCAACTCTTCAATAGCCTTCTTCTTCGTCGCGAATGTTGTACGTTCAGCAATGGGGAATATGTTAAATCCGGGTTAGCTGAGTTGGAGCTCTGGTGCTGCCAGGCAAAAGAGGAGTATGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGCTTCTTGGTTATACATCAGAAATACAGAATTTCATATGATGAAATCACCAATGATCTTTGCCCGATTCTGAGTGTCCAGCAACTTTATAGAATATGTACACTCTACTGGGATGACAACTATAACACTCGAAGCGTGTCGCCTGATGTAATATCCAGTATGAGAGTGCTCATGACTGAGGACTCCAACAGTGCAGTTAGCAGTTCCTTCCTATTGGATGACAATTCTAGCATCCCTTTCTCGGTCGAAGACCTCTCGAACTCACTGCAAGAGAAAGATTTCTGCGGCGTGAAGCCTGCCGACGACTTGCTTGAGAACCCAGCCTTCCAATTTTTAAACGACTCAGCTCGGAAATCTTGTTTTTGTACCATCCTCCCACAAAGAAAGGTCCCTCTCCTTGATGAAATTTTATTTATTCATTCAATCTGGGTTTGGTAG | 4620 | 41.36 | MASTTGLVVGSFVWLEDSEEAWIEGEVLEIRGDEIEVLCTSGKTVVVKAANVYPKDSEVPPCGVDDMTKLAYLHEPGVLHNLKLRYDINEIYTYTGNILIAVNPFTKLPHLYDSYMMAQYKGAAFGELSPHPFAVADAAYRLMVNEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGNPRDFHYLNQSNCYELDGIDDAKEYIATRKAMEVVGISLDEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDETITKWLDPNSAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLGASKCSFVSCLFPPLAEESSKSSKFSSIGSRFKLQLVALLETLSATEPHYIRCVKPNNLLKPSIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVAACKRLLEKVGLKGYQIGKTKVFLRAGQMAELDALRTEILGRSASIIQRKVRSYLARRSFVLLRRSATHLQSACRGQLARQVFEGMRREASSIMIQRNLCMHICRKAYKEKYSSAVSIQTGMRGMAARNELRFRRRSKAAIIIQSYCRRYLAQLHYKKLKKAAITTQSAWRGRVARKELRKLKMAAKETGALQAAKNKLEKQVEELMWRLQLEKRMRADLEEAKTQENEKLQSALQDMQLQLKETRTMFEKEREAAKKAADIIPIVKEVPVIDNAIIEKISGENEKLKALVCSLEKKIGETEKKYEEANRVSEERLKQASEAETKIIQLKTAMQRLEQKFSNIESQNQILRQQTFMTTPVKKMADHLPIAVAEKLENGSHLIEDNKIDEQLVTPVKALKRISSESEIKLSRPLFENQHENVDALVSCVMNNIGFSNGKPVAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAIENQDNNDHLAYWLSNTSGLLFLLQRSLKAAGAPRKPPTSTSLFGRMTMGFRSSPSSNSLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTSLLSLCIQVPRTSKGVLRSGRSFGKDTQTNYWQSIIECLNMLLCTLKENFVPQILTQNIFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPDVISSMRVLMTEDSNSAVSSSFLLDDNSSIPFSVEDLSNSLQEKDFCGVKPADDLLENPAFQFLNDSARKSCFCTILPQRKVPLLDEILFIHSIWVW | 1539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 276033 | 287599 | + | CmaCh08G000510.1 | Cma08g00051 | 298746 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g00051 | 1539 | ProSiteProfiles | IQ motif profile. | 737 | 764 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | CDD | MYSc_Myo11 | 76 | 720 | IPR036018 | - | |
Cma08g00051 | 1539 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
Cma08g00051 | 1539 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | ProSiteProfiles | IQ motif profile. | 806 | 835 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Coils | Coil | 997 | 1048 | - | - | |
Cma08g00051 | 1539 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
Cma08g00051 | 1539 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 787 | 883 | IPR027417 | - | |
Cma08g00051 | 1539 | ProSiteProfiles | Dilute domain profile. | 1159 | 1454 | IPR002710 | - | |
Cma08g00051 | 1539 | Gene3D | - | 11 | 55 | IPR008989 | GO:0003774|GO:0005524|GO:0051015 | |
Cma08g00051 | 1539 | ProSiteProfiles | IQ motif profile. | 854 | 883 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | ProSiteProfiles | IQ motif profile. | 758 | 787 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | PANTHER | MYOSIN | 6 | 1506 | - | - | |
Cma08g00051 | 1539 | Pfam | Myosin N-terminal SH3-like domain | 11 | 51 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | Pfam | DIL domain | 1330 | 1433 | IPR002710 | - | |
Cma08g00051 | 1539 | SMART | DIL_2 | 1329 | 1436 | IPR002710 | - | |
Cma08g00051 | 1539 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | CDD | MyosinXI_CBD | 1110 | 1477 | IPR037975 | GO:0007015 | |
Cma08g00051 | 1539 | Pfam | IQ calmodulin-binding motif | 759 | 778 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Pfam | IQ calmodulin-binding motif | 856 | 875 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Pfam | IQ calmodulin-binding motif | 737 | 755 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Pfam | IQ calmodulin-binding motif | 833 | 852 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Gene3D | - | 252 | 310 | - | - | |
Cma08g00051 | 1539 | Gene3D | - | 439 | 623 | - | - | |
Cma08g00051 | 1539 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 36 | 785 | IPR027417 | - | |
Cma08g00051 | 1539 | SMART | MYSc_2a | 57 | 733 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | Coils | Coil | 877 | 950 | - | - | |
Cma08g00051 | 1539 | PANTHER | MYOSIN-14 | 6 | 1506 | - | - | |
Cma08g00051 | 1539 | ProSiteProfiles | Myosin motor domain profile. | 62 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | ProSiteProfiles | IQ motif profile. | 831 | 860 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Gene3D | - | 833 | 882 | - | - | |
Cma08g00051 | 1539 | Gene3D | - | 785 | 832 | - | - | |
Cma08g00051 | 1539 | Gene3D | - | 735 | 784 | - | - | |
Cma08g00051 | 1539 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | SMART | iq_5 | 830 | 852 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | SMART | iq_5 | 734 | 756 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | SMART | iq_5 | 757 | 779 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | SMART | iq_5 | 782 | 804 | IPR000048 | GO:0005515 | |
Cma08g00051 | 1539 | Pfam | Myosin head (motor domain) | 64 | 720 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00051 | 1539 | Gene3D | - | 667 | 731 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma08g00051 | Cma17g01361 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00051 | Cma-Chr8:276033 | Cma12g01141 | Cma-Chr12:8982701 | 0 | dispersed | |
Cma06g01282 | Cma-Chr6:8516480 | Cma08g00051 | Cma-Chr8:276033 | 0 | transposed | |
Cma13g00731 | Cma-Chr13:6486327 | Cma08g00051 | Cma-Chr8:276033 | 6.95E-08 | transposed | |
Cma17g01361 | Cma-Chr17:9101620 | Cma08g00051 | Cma-Chr8:276033 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g00051 | K10357 | - | csv:101208630 | 2826.97 |