Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00374 ATGGCTCGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGCGTTGTTCCATTGAATACATGGGTGCTTATCTCCAATTTCAAGCTAGCTTACAACATTCTCCGCCGCTCGGATGGGACATTCAACCGTGAGTTAGCGGAGTATCTTGAGCGTAAAGTTCCTGCCAATGTGATTCCTGTTGATGGGGTTTTCTCGTTTGATCATGTCGATCGAGCTTCTGGCCTTCTTAACCGAGTTTATCAGCTATCCCCTGGAAACGAAGCTCGATGGGGTATCGTTGATCTTGAGAAGCCTCTAAGCACGTCTAAAGTTGTTCCTGTCATCCTGTTTTTTCATGGGGGGAGCTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACGTTTTGCCGTCGAATTGTAAGCATCTGCAAGGCAGCTGTTGTCTCGGTTAACTATCGTCGGTCGCCTGAACATCCATATCCATGTGCGTATGAGGATGGCTGGGCTGCACTTAAATGGGTTAAGTCAAAAACATGGCTGCAAAGTGGGAAGGACTCTAAGGTTCATGTGTATTTAGCTGGCGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCTGTGAAGGCAGCTGAAGAAGACATCGAAGTCTTAGGCAATATCCTTCTTCACCCGATGTTCGGTGGCAAAAAGAGAACCGAATCTGAGAAGAAACTCGACGGTAAATACTTCGTAACCATCCAAGACCGAGATTGGTACTGGAGAGCCTATCTCCCTGAAGGAGAAGACAGAGATCACCCAGCTTGCAACATTTTTGGCCCCAAATCCAAAAGCATAGCAGGACTCGACTTCCCGAAAAGCCTAGTCGTCGTTGCCGGTTTGGATTTAATGCAAGACTGGCAACTTGCTTACGTGCAAGGGCTGAAAGACTCCGGTCACGACGTTAAACTTCTCTTCCTCGAACAGGCGACAATCGGGTTTTACTTCTTGCCTAACAATCAACATTTCTATTGTCTAATGGATGAGATAAATAGCTTCATCAACCCGTAA 1029 46.16 MARSNEVNLNESKSVVPLNTWVLISNFKLAYNILRRSDGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLSPGNEARWGIVDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSICKAAVVSVNYRRSPEHPYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVKAAEEDIEVLGNILLHPMFGGKKRTESEKKLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNIFGPKSKSIAGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNQHFYCLMDEINSFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2163979 2166789 - CmaCh08G003740.1 Cma08g00374 299069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00374 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Cma08g00374 342 SUPERFAMILY alpha/beta-Hydrolases 98 341 IPR029058 -
Cma08g00374 342 PANTHER GIBBERELLIN RECEPTOR GID1B 3 340 - -
Cma08g00374 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Cma08g00374 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Cma08g00374 342 PANTHER ARYLACETAMIDE DEACETYLASE 3 340 - -
Cma08g00374 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00374 Cma17g01144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00374 Cma-Chr8:2163979 Cma10g01110 Cma-Chr10:7518689 0 dispersed
Cma17g01144 Cma-Chr17:7958504 Cma08g00374 Cma-Chr8:2163979 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00374 K14493 - csv:101219912 670.618