Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00406 ATGGAAGTCGATCGGACGGCCGATAACTATCCCGATCTCCAAGAGAGCTCCGACGACTCCACCCCTAACCTCGCCGAAAGAAACCTCCGACGTAATGATTCGTTGGACGTCGAATCCCGCACCATCCCCGGCGCCGTCGCCGGCAGCAATGGTCACAAGGTGGCGAGCTGGGTGGTGATATTGCAATTAGCGTTTCAGAGCATCGGAGTAGTATACGGCGATATCGGAACGTCGCCGTTGTACGTGTATGCGAGTACGTTTACAGAGGGAATCAAGCATAACGACGACGTTTTGGGCGTGCTGTCGTTGATTCTTTACACCCTCACATTCATCCCGTTGCTCAAGTACGTCTTCTTCGTCTTGCAAGCCAACGACAATGGCGAAGGTGGCACATTTGCTTTATACTCCCTTCTCTGCCGATACGCCAAAATCGGGCTGATACCGAGCCAGCAAGTGGAAGATCAAGAAGTGTCGAATTTTCAGGTGGCGCCGCCGACCAACCGCCAGAAAATGGCGTCTTGCCTGAAATCCAAGCTGGAAAACAGCCGCGCCGCCAAGATTTTCTTACTCTTCGCCACCATGCTTGGCACTTCCATGGTTATCGGCGACGGCGTTCTAACTCCTTCCATCTCAGTTTTGTCCGCCGTCGGAGGAATCAAGAATGCTACCTCGACTATGACACAAGAGAAAATAGTGTGGATATCAGTAGCAATCTTGGTTTGCCTGTTCATGGTGCAAAGATTTGGTACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCATTTGGTTTGCACTCATTGGTGGCATTGGCTTCTACAACTTTATTAAATTTGACCCTTCTGTCATCAAAGCTGTCAACCCTAAATACATCTTTCATTACTTCAAAAGAAACAAAATCGATGCTTGGATCTCTCTCGGCGGCGTCGTTCTTGCTATTACAGGTACTGAAGCTTTATTTGCGGACGTGGGACACTTCACAGTGATGTCCATAAGACTAAGCATGTGTTGCGTGACCTACCCGGCTCTCGTCTCCGCCTACGTTGGTCAAGCCTCATTTCTCCGCAAGCATGCTGATCTCGTCTCGGATACCTTTTTCGAGTCTATTCCTGGTCCTCTCTATTGGCCTACGTTCGTGGTGGCTGTGCTTGCCTCTATCGTTGCGAGCCAAGCTATGATCTCGGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGTTGCTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCGAAGTACGAGGGCCAAGTTTACATCCCCGAAGTTAACTATCTTCTCATGTTGGCTTGTCTTGGAGTCACTTTAGGGTTTAAAGATACAACGAGAATCGGGAATGCCTATGGCATAGCTGTGGTGTTCGTGATGGCACTCACTTCAAGTTTTCTCGTGCTCATCATGATCATGATATGGAAATCGCACGTACTTATTATAATCTCCTATGTTCTAACCATTGGCTTATTGGAATTTCTCTACCTAAGCTCAGTTCTTTACAAGTTCGACCAAGGGGGTTATCTTCCTTTAGCTTTTGCTGGGGTTTTGATGATAATAATGTACATTTGGCACGATGTTCATAGAAGAAAATACTACTACGAACTCGAACACAAGATTTCCGCTGAAAAGCTCAAGGACATTGCATCCCTCACAACCATCAACCGTGTCCCTGGTCTCGCCCTATTCTACTCCGAGCTCGTCCAAGGCATTCCCCCGATCTTCAATCATTATCTCGTCAACATCCCGACTCTCCAAAGGGTCCTTATTTTCGTGTCCTTCAAGTCCCTCCCGATTAGCAAAGTTCCGATGGAAGAGCGATTTCTATTCCGACGAGTTGAGCCTCGTGACATCAATGTGTTTCGTTGTGTGGTTCGATATGGATATAGAGATATCATCCACGAACAAGAGTCGTTCGAGCAAGTACTGGTGGAGAGATTGAAAGGGTTTATCGAAGAGGAGTTGTGGACGTTGGAAAACGACGACGGTAGAGTCGAGGAGAAGAGGAGGAACATTGAAGAGGAGATAGAGATGGTGGATAAAGCTTGGAGAGACGGGATTGTTCACTTGATCGGACAAAATGAGGTTGTGGCAAGCAAAGGGTCGGGGTTTGCAAAAAGGGTTTTGATCGATTATGCTTATAATGCATTGAGAAGAAATTTGAGACAAAGTGAAGAGGTTTTTTACATCCCTCGTAAGCGTATGCTCAAAGTGGGAATGACTTACGAGCTTTAG 2250 47.11 MEVDRTADNYPDLQESSDDSTPNLAERNLRRNDSLDVESRTIPGAVAGSNGHKVASWVVILQLAFQSIGVVYGDIGTSPLYVYASTFTEGIKHNDDVLGVLSLILYTLTFIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVAPPTNRQKMASCLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQEKIVWISVAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFIKFDPSVIKAVNPKYIFHYFKRNKIDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVTYPALVSAYVGQASFLRKHADLVSDTFFESIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHVLIIISYVLTIGLLEFLYLSSVLYKFDQGGYLPLAFAGVLMIIMYIWHDVHRRKYYYELEHKISAEKLKDIASLTTINRVPGLALFYSELVQGIPPIFNHYLVNIPTLQRVLIFVSFKSLPISKVPMEERFLFRRVEPRDINVFRCVVRYGYRDIIHEQESFEQVLVERLKGFIEEELWTLENDDGRVEEKRRNIEEEIEMVDKAWRDGIVHLIGQNEVVASKGSGFAKRVLIDYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2327699 2331903 - CmaCh08G004060.1 Cma08g00406 299101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00406 749 MobiDBLite consensus disorder prediction 1 30 - -
Cma08g00406 749 Pfam K+ potassium transporter 64 636 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma08g00406 749 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 748 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma08g00406 749 TIGRFAM kup: potassium uptake protein 63 748 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma08g00406 749 PANTHER POTASSIUM TRANSPORTER 16 748 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00406 Cma17g01110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00406 Cma-Chr8:2327699 Cma17g01110 Cma-Chr17:7779664 0 dispersed
Cma14g01387 Cma-Chr14:10706082 Cma08g00406 Cma-Chr8:2327699 0 transposed
Cma14g00890 Cma-Chr14:4609242 Cma08g00406 Cma-Chr8:2327699 0 wgd
Cma17g01109 Cma-Chr17:7776646 Cma08g00406 Cma-Chr8:2327699 1.96E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00406 K03549 - csv:101213493 1328.54