Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma08g00410 | ATGGCTACCTCCATTAGAGTCCACGGAGTCCCCTTTTCCGGACCCACATGCAGAGTTTTAGCTTGTCTCTACGAGAAAGAACTTGAATACGAGTTCGTCAAACTCAAGATGCACGAAGGGGAACACAAGAAACAGCCATTTCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTCCAAGATGGAGATTTGACGCTTTTTGAATCCAGGGCAATCACGCAGTATATCGTAGGGAATTATGCTAATAATGGAACCCAATTGATTTTCCAAGACCCCAAGAAAGCGGCGATCGTATTGACATGGATTGAAGTGGAGAGCCACCATTATGATCCACCAGCCTCGAAACTGGTCCTCGAGCTCTGCTTGAAGCCTTTGCTTGGGTGGGGCGAGACGGATGCTGCAGTGGTTGAGCAAAGTGAAGCTGAGCTAGCTAAAGTTCTTGATATCTATGAGGATAGGTTGGCTCAGTCCAAATACTTGGGAGGTGAGTCCTTCACCTTAGCTGACTTGCACCATCTCCCAACCATAGACTACTTATTTGGGACACAGATGAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCATGGGCGGTTGATATCATGGCCAGGCCTGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA | 645 | 47.91 | MATSIRVHGVPFSGPTCRVLACLYEKELEYEFVKLKMHEGEHKKQPFLSINPFGQVPGFQDGDLTLFESRAITQYIVGNYANNGTQLIFQDPKKAAIVLTWIEVESHHYDPPASKLVLELCLKPLLGWGETDAAVVEQSEAELAKVLDIYEDRLAQSKYLGGESFTLADLHHLPTIDYLFGTQMKKLFESRPHVNAWAVDIMARPAWAKVLALR | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 2346863 | 2348162 | - | CmaCh08G004100.1 | Cma08g00410 | 299105 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma08g00410 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 4 | 213 | - | - | |
| Cma08g00410 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
| Cma08g00410 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 213 | - | - | |
| Cma08g00410 | 214 | CDD | GST_C_Phi | 93 | 211 | IPR034347 | - | |
| Cma08g00410 | 214 | SUPERFAMILY | Thioredoxin-like | 5 | 84 | IPR036249 | - | |
| Cma08g00410 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 114 | 205 | IPR004046 | - | |
| Cma08g00410 | 214 | Gene3D | Glutaredoxin | 3 | 88 | - | - | |
| Cma08g00410 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 214 | IPR010987 | - | |
| Cma08g00410 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 14 | 77 | IPR004045 | - | |
| Cma08g00410 | 214 | SUPERFAMILY | GST C-terminal domain-like | 75 | 212 | IPR036282 | - | |
| Cma08g00410 | 214 | SFLD | Glutathione Transferase (cytosolic) | 4 | 212 | IPR040079 | - | |
| Cma08g00410 | 214 | SFLD | Main.5: Phi-like | 4 | 212 | - | - | |
| Cma08g00410 | 214 | Gene3D | - | 91 | 214 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cma08g00410 | Cma17g01106 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma01g01364 | Cma-Chr1:9715391 | Cma08g00410 | Cma-Chr8:2346863 | 3.90E-10 | dispersed | |
| Cma06g00887 | Cma-Chr6:5603706 | Cma08g00410 | Cma-Chr8:2346863 | 4.81E-10 | dispersed | |
| Cma08g00410 | Cma-Chr8:2346863 | Cma17g01106 | Cma-Chr17:7765553 | 4.47E-117 | dispersed | |
| Cma08g00409 | Cma-Chr8:2344840 | Cma08g00410 | Cma-Chr8:2346863 | 9.95E-107 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma08g00410 | K00799 | - | csv:101212536 | 340.887 |