Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00410 ATGGCTACCTCCATTAGAGTCCACGGAGTCCCCTTTTCCGGACCCACATGCAGAGTTTTAGCTTGTCTCTACGAGAAAGAACTTGAATACGAGTTCGTCAAACTCAAGATGCACGAAGGGGAACACAAGAAACAGCCATTTCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTCCAAGATGGAGATTTGACGCTTTTTGAATCCAGGGCAATCACGCAGTATATCGTAGGGAATTATGCTAATAATGGAACCCAATTGATTTTCCAAGACCCCAAGAAAGCGGCGATCGTATTGACATGGATTGAAGTGGAGAGCCACCATTATGATCCACCAGCCTCGAAACTGGTCCTCGAGCTCTGCTTGAAGCCTTTGCTTGGGTGGGGCGAGACGGATGCTGCAGTGGTTGAGCAAAGTGAAGCTGAGCTAGCTAAAGTTCTTGATATCTATGAGGATAGGTTGGCTCAGTCCAAATACTTGGGAGGTGAGTCCTTCACCTTAGCTGACTTGCACCATCTCCCAACCATAGACTACTTATTTGGGACACAGATGAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCATGGGCGGTTGATATCATGGCCAGGCCTGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA 645 47.91 MATSIRVHGVPFSGPTCRVLACLYEKELEYEFVKLKMHEGEHKKQPFLSINPFGQVPGFQDGDLTLFESRAITQYIVGNYANNGTQLIFQDPKKAAIVLTWIEVESHHYDPPASKLVLELCLKPLLGWGETDAAVVEQSEAELAKVLDIYEDRLAQSKYLGGESFTLADLHHLPTIDYLFGTQMKKLFESRPHVNAWAVDIMARPAWAKVLALR 214
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 2346863 2348162 - CmaCh08G004100.1 Cma08g00410 299105
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00410 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 213 - -
Cma08g00410 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Cma08g00410 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 213 - -
Cma08g00410 214 CDD GST_C_Phi 93 211 IPR034347 -
Cma08g00410 214 SUPERFAMILY Thioredoxin-like 5 84 IPR036249 -
Cma08g00410 214 Pfam Glutathione S-transferase, C-terminal domain 114 205 IPR004046 -
Cma08g00410 214 Gene3D Glutaredoxin 3 88 - -
Cma08g00410 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 214 IPR010987 -
Cma08g00410 214 Pfam Glutathione S-transferase, N-terminal domain 14 77 IPR004045 -
Cma08g00410 214 SUPERFAMILY GST C-terminal domain-like 75 212 IPR036282 -
Cma08g00410 214 SFLD Glutathione Transferase (cytosolic) 4 212 IPR040079 -
Cma08g00410 214 SFLD Main.5: Phi-like 4 212 - -
Cma08g00410 214 Gene3D - 91 214 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma08g00410 Cma17g01106 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01364 Cma-Chr1:9715391 Cma08g00410 Cma-Chr8:2346863 3.90E-10 dispersed
Cma06g00887 Cma-Chr6:5603706 Cma08g00410 Cma-Chr8:2346863 4.81E-10 dispersed
Cma08g00410 Cma-Chr8:2346863 Cma17g01106 Cma-Chr17:7765553 4.47E-117 dispersed
Cma08g00409 Cma-Chr8:2344840 Cma08g00410 Cma-Chr8:2346863 9.95E-107 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00410 K00799 - csv:101212536 340.887