Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00461 ATGTATATCGAAACTTTTGAATCTGAGAAGCAGAAAGTGAAAAATGAGGGAGTGACAACTCCATCAAATGCAGTAAGGTCCACGCAGCTATGTGCTACCAGTTGCTCTAGGTGGATTCTCAAATCTGATTATCTAACAGATAGTAGTCAGGCCGGAAAATTCTTGATGGAGGAGTCTTATGAATGGCACAAGAACGGCCTCACTGAATACAGTGCTATCAATTTGAAGGCTCCTAGGAAGTGTCAGTTCTTGAGGGAGAGAACAGGCCACGGTGCCTTTTATGGGATGCGTAGTATCATATACGGGGAATCTATTGCTCCACCTTTGGATACCCTCAAGCATGCTGTTAAGGCTGGAGATGGGACAATTCTAGCCACATCTCCACCTTATACTAAATTCCTAAAGTCTGGAGTTGATTTTGCTGTTGTCAGCCCTGCACGCCACGTGTTGATTTGTGGGTCCAAGAGTTCTTAA 474 44.3 MYIETFESEKQKVKNEGVTTPSNAVRSTQLCATSCSRWILKSDYLTDSSQAGKFLMEESYEWHKNGLTEYSAINLKAPRKCQFLRERTGHGAFYGMRSIIYGESIAPPLDTLKHAVKAGDGTILATSPPYTKFLKSGVDFAVVSPARHVLICGSKSS 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2590744 2592483 + CmaCh08G004610.1 Cma08g00461 299156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00461 157 Gene3D BRCT domain 18 90 IPR036420 -
Cma08g00461 157 SUPERFAMILY BRCT domain 27 65 IPR036420 -
Cma08g00461 157 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 31 145 IPR044254 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00461 Cma17g01040 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00461 Cma-Chr8:2590744 Cma17g01040 Cma-Chr17:7515392 7.84E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00461 K10728 - cpep:111778661 217.238