Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g00530 | ATGGCCGATCAGGTTCGACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCTGGTGTTGCTTCAGGTTTCCGAGCCTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCTAATGCTGCTTTTCAATACCCTGCTGTGCAATCCTGCGTTGCTACAACTGATCTTTCTAGGGTTACCTCTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACTGCCGCTGCCCCAATTGAACGTGTCAAGCTGTTGATTCAAAATCAGGACGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCCTTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCATTTAAGGATTACTTCAAGAGACTGTTCAACTTCAAGAAAGATAGAGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCAGGTGGTGCAGCTGGTGCCTCATCCCTTCTTTTCGTTTACTCTCTCGACTATGCTCGTACCCGATTGGCAAACGATGCCAAGGCTGCGAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCCGATGGTATCGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTGTACCGTGGTCTATACTTTGGAATGTACGATTCTCTGAAGCCTGTTCTTTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTCGCCCTTGGTTGGCTGATCACCAACGGTGCTGGGCTTGCATCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAAATCTTGAAGAACGAGGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCCAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTCGCCGGTTACGACAAGTTGCAGGTTATCGTCTTCGGAAAGAAATACGGATCCGGTGGCGGCTAA | 1176 | 47.96 | MADQVRHPTIYQKVAGQLSLQSGVASGFRACDDGFRNPALYQRRASISNYSNAAFQYPAVQSCVATTDLSRVTSTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGG | 391 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3071532 | 3074573 | - | CmaCh08G005300.1 | Cma08g00530 | 299225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 259 | 277 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | PRINTS | Mitochondrial carrier protein signature | 303 | 325 | IPR002067 | GO:0055085 | |
Cma08g00530 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 294 | 380 | IPR018108 | - | |
Cma08g00530 | 391 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 2 | 390 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
Cma08g00530 | 391 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | PRINTS | Adenine nucleotide translocator signature | 299 | 315 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cma08g00530 | 391 | Gene3D | Mitochondrial carrier domain | 91 | 387 | IPR023395 | - | |
Cma08g00530 | 391 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 2 | 390 | - | - | |
Cma08g00530 | 391 | Pfam | Mitochondrial carrier protein | 192 | 289 | IPR018108 | - | |
Cma08g00530 | 391 | Pfam | Mitochondrial carrier protein | 295 | 380 | IPR018108 | - | |
Cma08g00530 | 391 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
Cma08g00530 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 286 | IPR018108 | - | |
Cma08g00530 | 391 | SUPERFAMILY | Mitochondrial carrier | 88 | 376 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00091 | Cma-Chr5:390182 | Cma08g00530 | Cma-Chr8:3071532 | 8.06E-61 | dispersed | |
Cma08g00530 | Cma-Chr8:3071532 | Cma08g00532 | Cma-Chr8:3079821 | 0 | dispersed | |
Cma08g00530 | Cma-Chr8:3071532 | Cma08g00531 | Cma-Chr8:3075419 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g00530 | K05863 | - | csv:101203733 | 720.694 |