Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g00569 | ATGACAAAGCAAGATCAGCAAGATAGACAGAGCTCTGAATCGATCATGGGGACTCCGGTGAATATCATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGATGGTCAAGTTACAGATATTAGTGGCAAAAATGCCACCATATTCACCTCCATGGATAAAACTATTGTTGCGACAATTTCGAGTATATATCCGAAAGACACGGAGGCGCCGCCGGCTGGGGTTGACGACATGACGAAATTGGCATACCTCCATGAACCTGGAGTTTTGCATAATCTAGCATGTCGATTTTCTCTCAACGAGATATACACTTACACCGGGAATATTCTAATCGCCGTGAATCCTTTCCGGAGATTGCCGCATTTGTATGATATTCACATGATGGAGCAGTACAAAGGAGCTACATTCGGCGAGCTTAGTCCTCATCTTTTCGCAGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATCTTAGTAAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACGAAGATGCTCATGAGATATCTAGCGTTCATGGGAGGCAGATCAGATACAGAAGGAAGAACAGTCGAGCAGCAGGTTTTGGAGTCCAACCCTGTGTTGGAAGCATTTGGAAATGCCAAGACCGTCAAAAACAACAATTCGAGTCGTTTTGGAAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACGTACCTTCTCGAACGGTCGCGTGTTTGCCAAGTCTCGGATCCTGAGAGAAACTACCATTGTTTTTACATGCTTTGTGCAGCACCACCAGAAGATGTCAAGAAATACAAGTTAGCAGACCCAAGGACATATCGTTATCTTAATCAAACAAATTGTTACGAAGTGGCGAATGTTGATGATTCAAGAGAGTACTTAGAGACGAGAAACGCCATGGATGTTGTAGGAATCAGCCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCGGCAATACTGCATCTTGGAAACATTGAATTCATGAAAGGGAAGGAATTTGACTCCTCCAAAGTGAAAGACGAGAAATCAAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCATTGGAACATTCACTCTGTCAGCGTGTCATAGTGACTCCTGATGGGAAAATTACAAAGCCATTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCAAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCGAGCTTAATTGGTGTGCTTGATATTTATGGATTTGAAAGCTTCAAGGTCAATAGTTTTGAGCAGCTTTGCATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTACACGAAAGAAGAAATTAACTGGAGCTATGTTGAGTTTGTGGATAATCAGGATGTCCTTGATCTCATTGAGAAGAAACCTGGAGGTATCATTGCCCTGCTTGATGAAGCCTGCATGTTTCCAAAGTCGACTCATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAAACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGACCAATTTCTAGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTGAATGCCTCACAATGCTCTTTTGTTGCAAATCTTTTCCCTCCACTTCCTCAGGAGAGCTCAAAGCAATCTAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTCCAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATCAGATGTGTGAAGCCCAACACAGTCTTGAAGCCTGGAATCTTTGAAAACTTCAATGTGTTGAACCAATTGAGATGTGGGGGAGTTCTCGAGGCAATTAGAATTAGCTGTGCAGGATATCCAACGAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCAGACGGGACCGATGAAAAATCAGCATGCATGGCAATATGCGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACAAAAGTGTTTCTGAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATATTGGCCAATGCTGTCAGACGCATCCAGCGGCAAATTCGAACCCTTCTAACTAGGAAAGAGTTTCTCACCATGAGGAGAGCTACAATTCATATGCAGAAACATTGGAGAGCGCAACTTGCTCGTAAGCTGTATGAGAAAATGAGGAGAGAAGCTGCTTCAATCCGTATACAGAAACATGCACGTGCTCATGCAGACAGAAAAGCTTACACAAAATTACTTGCTTCAGCTATAGTTATTCAAACTGGTATGCGGGCAATGGCCGCTAGAAATGAGTTCAGACACAGAAGAAGAACAAAGGCAGCTATTATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGCTTACAAACAGCAACAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGAGCTAAAGTTGCAAGGAAAGAGCTTAAAAAACTAAAGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAGGCCAAGGACAAATTGGAGAAGCGTGTCGAGGAGCTAACGTGGCGCCTGGAATTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCCAAGGGGCAAGAAGTTGCAAAGTTACAAAGTGCTTTGGAAGAAATGCAAGGGCAGCTGGATAAAGCCAATGCTGCAATCATACGTGAGAGAGAAGAAGCAAAATTGGCCATAGAACAAGCTCCACCGGTCATTAAGGAAGTGCCCGTGGTTGATGAGACCAAGCTGGAAATGTTGAGAAATCACAATGAAGAACTTGAGGGGGTGGTTGGAGAGCTGAAGAAGAAACTTGAGGAATTCGAAGAAAAGTTTGCTGAAGTAGAAAAGGAAAGTAAAGCGACACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAGCTTCAGGAGACTATTGAGAGATTGGAATCAAATTTATCTAGCCTCGAGTCCGAGAACCAGGTTCTACGCCAGCAGGCTTTGGTTGCTGCAGACAATGAATCCCTCTCTGATGAACTGCAAGCCCTCAAGAGTAAGATCGGAAGTCTAGAGGCGGAGAATGAAGTTCTTCGCAACCGGACAGTAGCTGTTGAGCACGTGTCTATTCCTGCAGGGGTGCTTGCAGAAAGCAAGCCTTTGGATAACGGACAGGCTTTAGATAACGGGCAGGCTTTAGATAACGGGCATATTGTGGAAGAAGAGATTAAAGCAACTAAGGAACCACCTGTTGTTCCCGTCCTAGCTAAGCAAGGCTCGCTCACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAACGTTTTGACAAAGGCAGACCAGTTGCAGCCTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGATAAGACCAATATATTCGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGACCTTGCATATTGGCTTTCAACCACTTCTACCCTTTTCTATCTTCTTCAAAGTTCACTCAAGGCAGCCAATACAAGTACTGCGGCTTCACATCGCAACCGTACTTCCCCTTCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAATGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGAAAGACAAACAATCAATCTAAAGTTGAAGCCAAGTACCCAGCATTGCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAACTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATACAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAATATTGTTGCAAAACAACAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAATCTAGACCAGACCTTGGATATAATGTCTGAAAATCATGTTCCCTCCATGATCATGAGAAAAATCTTCCTTCAGGTTTTCTCATTCATAAATGTCCAGCTCTTCAATAGCTTGTTACTACGACGTGAGTGCTGTTCCTTCAGTAATGGAGAGTACTTAAAGTTAGGTCTGCAGGAGTTGGAGCAATGGTGTACCAAAGCTACTGATACGTATGCTGGCTCTTCCTGGAATGAACTTCAACACATAAGACAGGCAGTAGGATTTCTGGTGTTACACCAGAAGTCCCAGAAAAGTTTGAATGAGATAACAGATGAATTGTGCCCGATTCTGAGCATCCCGCAAATATATCGCATAGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGGTTATCTCCTGATATAATTGGAAGAATGAGAGTCCTATTAGCAGAAGACTCCATCAACATCCCAAACAACTCCTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATAGAAGAAGTATTCCGGTCCTTCGGCGAGGTTAACCTGTCCGATATCGACCCGCCGCCGCTCATAAGACAAAGATCTGATTTCCATTTTCTACTGCAGCAAGTAAGTGAATGA | 4746 | 42.88 | MTKQDQQDRQSSESIMGTPVNIIVGSHVWVEDPEDAWIDGQVTDISGKNATIFTSMDKTIVATISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLADPRTYRYLNQTNCYEVANVDDSREYLETRNAMDVVGISQDEQDAIFRVVAAILHLGNIEFMKGKEFDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGKITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKVNSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTNFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPQESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGTDEKSACMAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTLLTRKEFLTMRRATIHMQKHWRAQLARKLYEKMRREAASIRIQKHARAHADRKAYTKLLASAIVIQTGMRAMAARNEFRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRAKVARKELKKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQSALEEMQGQLDKANAAIIREREEAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGVVGELKKKLEEFEEKFAEVEKESKATLKEAEEAQLKSMQLQETIERLESNLSSLESENQVLRQQALVAADNESLSDELQALKSKIGSLEAENEVLRNRTVAVEHVSIPAGVLAESKPLDNGQALDNGQALDNGHIVEEEIKATKEPPVVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEADKTNIFDRIIHTIRSSIESQENISDLAYWLSTTSTLFYLLQSSLKAANTSTAASHRNRTSPSTLFGRMAYGLRSSSMGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNNLDQTLDIMSENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCTKATDTYAGSSWNELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGRMRVLLAEDSINIPNNSFLLDVDSSIPFSIEEVFRSFGEVNLSDIDPPPLIRQRSDFHFLLQQVSE | 1581 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3238982 | 3249843 | - | CmaCh08G005690.1 | Cma08g00569 | 299264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g00569 | 1581 | Gene3D | - | 799 | 846 | - | - | |
Cma08g00569 | 1581 | Gene3D | - | 847 | 896 | - | - | |
Cma08g00569 | 1581 | Gene3D | - | 748 | 798 | - | - | |
Cma08g00569 | 1581 | PANTHER | MYOSIN | 34 | 1574 | - | - | |
Cma08g00569 | 1581 | Gene3D | Kinesin motor domain | 80 | 677 | IPR036961 | - | |
Cma08g00569 | 1581 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 57 | 800 | IPR027417 | - | |
Cma08g00569 | 1581 | Pfam | DIL domain | 1399 | 1502 | IPR002710 | - | |
Cma08g00569 | 1581 | Coils | Coil | 937 | 971 | - | - | |
Cma08g00569 | 1581 | ProSiteProfiles | IQ motif profile. | 820 | 849 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Gene3D | - | 682 | 744 | - | - | |
Cma08g00569 | 1581 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 23 | 72 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | ProSiteProfiles | Dilute domain profile. | 1208 | 1523 | IPR002710 | - | |
Cma08g00569 | 1581 | SMART | iq_5 | 867 | 889 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | SMART | iq_5 | 844 | 866 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | SMART | iq_5 | 748 | 770 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | SMART | iq_5 | 819 | 841 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | SMART | iq_5 | 796 | 818 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | SMART | iq_5 | 771 | 793 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | ProSiteProfiles | IQ motif profile. | 772 | 801 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Coils | Coil | 891 | 925 | - | - | |
Cma08g00569 | 1581 | Gene3D | - | 267 | 325 | - | - | |
Cma08g00569 | 1581 | Coils | Coil | 1070 | 1097 | - | - | |
Cma08g00569 | 1581 | CDD | MYSc_Myo11 | 91 | 734 | IPR036018 | - | |
Cma08g00569 | 1581 | ProSiteProfiles | IQ motif profile. | 749 | 776 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Pfam | Myosin head (motor domain) | 79 | 734 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | ProSiteProfiles | IQ motif profile. | 868 | 897 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Pfam | IQ calmodulin-binding motif | 870 | 889 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Pfam | IQ calmodulin-binding motif | 773 | 792 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | PRINTS | Myosin heavy chain signature | 164 | 189 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | PRINTS | Myosin heavy chain signature | 211 | 238 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | PRINTS | Myosin heavy chain signature | 497 | 525 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | PRINTS | Myosin heavy chain signature | 444 | 472 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | PRINTS | Myosin heavy chain signature | 107 | 126 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | ProSiteProfiles | Myosin motor domain profile. | 77 | 746 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | Coils | Coil | 987 | 1063 | - | - | |
Cma08g00569 | 1581 | SMART | DIL_2 | 1398 | 1505 | IPR002710 | - | |
Cma08g00569 | 1581 | ProSiteProfiles | IQ motif profile. | 797 | 823 | IPR000048 | GO:0005515 | |
Cma08g00569 | 1581 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 327 | 616 | - | - | |
Cma08g00569 | 1581 | SMART | MYSc_2a | 71 | 747 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | CDD | MyosinXI_CBD | 1159 | 1546 | IPR037975 | GO:0007015 | |
Cma08g00569 | 1581 | Pfam | Myosin N-terminal SH3-like domain | 24 | 61 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cma08g00569 | 1581 | PANTHER | MYOSIN-12 | 34 | 1574 | - | - | |
Cma08g00569 | 1581 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 800 | 897 | IPR027417 | - | |
Cma08g00569 | 1581 | Gene3D | - | 454 | 638 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma08g00569 | Cma17g00917 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00569 | Cma-Chr8:3238982 | Cma11g00715 | Cma-Chr11:3486196 | 0 | dispersed | |
Cma17g00917 | Cma-Chr17:6904312 | Cma08g00569 | Cma-Chr8:3238982 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g00569 | K10357 | - | csv:101207221 | 2821.96 |