Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g00743 | ATGGAGGCTACTCGATTGCAGAAGAGCGCTACGCTATTGGCATCCATGTTCAACAAATCTTCATCTTCATCGGAGCTTGCCATGTTCGGACTTCCAAACTACTCTGGCCACATGGGGAAGCGGCTGACTTTCGAAATAAATTTGGTCAAACTAACATCGACGGCGGCGGTGTCCGCGGCATTATTCCGGCGACCATCCTTGCTTTCCTGGAGTCGGAGCTTCAGAAACTGGACGGCGAGGAGGCCAGAATTGCAGACTATTTATTTCGACGTGATTGCCGGAACGAGCACCGGCGGATTGGTGACGGCAATGTTAACGGCACCAAATGAGAAGAACAGACCGTTGCTGTCGGCGAAGGACATTAAGGATTTTTACCTTAATCACTGTCCCAAGATTTTGAAAATGTCGTGGCAAACTTACGTCGACGATCACCTCATGTGTGACATTGAGGGCAACCATCTCTCCTCCGCCGCCATCATTGGACATGACGCCAGTGTTTGGGCGCAGAGTGCCTCTTTCCCTCAGTTCAAGCCGGAGGAGATTGCGGCGATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGTACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTCGAAAGGTTGGGAGATTACCTGATCGAACAGGACAAAAAAATCTTTTATACCCTTTTGATTCTGCAATTCTCAACTTTCTTCTGCTTAATTGAGGGCGTTTTTGATCGGAGATTTAAGATTTTCAACGAAAACGGAGAGAAAATAAAAAGTAAAAATGTGAAGTAG | 924 | 47.19 | MEATRLQKSATLLASMFNKSSSSSELAMFGLPNYSGHMGKRLTFEINLVKLTSTAAVSAALFRRPSLLSWSRSFRNWTARRPELQTIYFDVIAGTSTGGLVTAMLTAPNEKNRPLLSAKDIKDFYLNHCPKILKMSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVERLGDYLIEQDKKIFYTLLILQFSTFFCLIEGVFDRRFKIFNENGEKIKSKNVK | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4459692 | 4467173 | - | CmaCh08G007430.1 | Cma08g00743 | 299438 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 251 | 264 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 205 | 214 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 238 | 251 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 218 | 233 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 135 | 148 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 161 | 174 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Plant profilin signature | 186 | 200 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PANTHER | PROFILIN | 135 | 263 | - | - | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 137 | 146 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 198 | 212 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 247 | 264 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 155 | 164 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 234 | 247 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PRINTS | Profilin signature | 174 | 194 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | SUPERFAMILY | FabD/lysophospholipase-like | 88 | 136 | IPR016035 | - | |
Cma08g00743 | 307 | SUPERFAMILY | Profilin (actin-binding protein) | 136 | 263 | IPR036140 | - | |
Cma08g00743 | 307 | Gene3D | Dynein light chain 2a, cytoplasmic | 134 | 264 | - | - | |
Cma08g00743 | 307 | CDD | PROF | 136 | 264 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | SMART | prof_2 | 135 | 265 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | PANTHER | PROFILIN | 135 | 263 | IPR005455 | GO:0003779 | |
Cma08g00743 | 307 | Pfam | Profilin | 135 | 264 | IPR005455 | GO:0003779 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00091 | Cma08g00743 | CCT | |
Cma01g00091 | Cma08g00743 | ECH | |
Cma08g00743 | Cma17g00758 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00743 | Cma-Chr8:4459692 | Cma12g01274 | Cma-Chr12:9918513 | 2.15E-76 | dispersed | |
Cma01g00091 | Cma-Chr1:420491 | Cma08g00743 | Cma-Chr8:4459692 | 1.05E-63 | wgd | |
Cma14g01287 | Cma-Chr14:10164737 | Cma08g00743 | Cma-Chr8:4459692 | 5.78E-67 | wgd | |
Cma17g00758 | Cma-Chr17:6120509 | Cma08g00743 | Cma-Chr8:4459692 | 2.05E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g00743 | K05759 | - | pop:7475105 | 241.121 |