Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00773 ATGGCAGCTGTGGCTGCACCTATCTTTGCACCACCTGCAGCTTTCATCGCACCAGCAATTTTAGCAAACGCTGCAATTCCTCCAACAAGTACAGCTCGCAACGCAACAGTTGGTTTTACTGCCATCCCATCCCATCGCATCCCCGCCGCAGCCGCACCTGTTATCTCAATACCTTCCATCTTCAACTACAACAATCTCTTTAACCCTCAAATGACCTCCATCCACCACCACCACCACTCTCCTCCCCACCACCACCTCTCCAAATCCACCTCCACCGTCTCCTCCTCCTCCTCCTCCACCGCCACCACCCAAGCCTGCGCCGCCTGCAAGTACCAACGCCGCAAGTGCGTTCCCGACTGCATCCTAGCCCCCTACTTCCCTCACCATCGCCAACGCCAATTCCTAAACGCTCACAAACTCTTCGGCGTTAGCAACATCACCAAAATCATCAAAAACCTCGATCCCTTCCAAAAGGAAGAGGCAATGCGCACCATTATTTTCCAATCCGACGTCCGATCCCTCGATCCGGTCGGCGGATGTTACCGCATCATTCGTGACCTTCAGCGCCAGATCCAGTACAGCAAAGCCGAGCTTGAAATGGTGCTTCATCAATTGGCGATTTGTAAGCACCAGGCTGCTGCCTCTGTTTCTGCCGCTGCGATTCTGGACGCGGATCATCCTATGAGTGGAGGATTTTCCGGAATCGAGAACCAATTTGTGGAGGAAGGATTTGTAATTGGGGAAAATGAAAATGCGGAGAGTTTAGACGACGAAGCGGCGGAGGTTTGGGGAATTCAGGCTTCCGAAATCTCGCCCTGTTCTTCCTTGAAATCCTCTATTCATGATTTTGATCATATCAATATTCATTATCATCATCAACAATTCGTTAAGTTTCATCCGGATCATCATCAGTTTCTTCATAAGAGTGAGGAAGCAGGCATGGTGGAAATAGATAATGTGATATTGAAAGAAGACTCAGAGCCAATGCAAAATGATGGAGAGGTTGAAGTCCTAAAGTATATATTTGAGAAAAAGGTGAGTGATATAGTTAAAAAGAGAAGAGGTCGGTGGAGCGAATCGATAAGTGTCGTGGGGAAACGAGACAGCAGGTGGCAAATCAACTGCCAAATCTTTGAGGGCCGCCCTGCCCTAAGGTGGCGGTTGAGTGCGGTGAAAAAAGAAAGAGATCTGATGAAAACTGCTGAAATTTCCTCTGCGATTGCGACTCTGATGGGGTTTCGATCGCTGTTTCTGCTTTTTGGGATTTGTTTTGCTGTTCGTTCTTGCTCTGTCTGTGAATCTGCAGTTATCGTTCCGAACGGGCGAAGCGAAGCGCGTTCTTCTCTCACAGGTGAAACTTTGAAACTCAGTTTGAGAATTTCTGTAAAACTAGCAACATCTGATCTCTGTGTTCACTATGAACTATCAAATCTTGACAATGATCATATAAACAGTAACGTTTATTGTTCTTATGATGCAGCAACTCGATTAGACGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACCGTGCCTGCTAAGAAATGGGGGCATGGTCATGAATTTCGCCATTCAAGAAGGAAGTTCAGAAACAATGCTCCACGGCGTGGTTATCGTGCATCGACTCCGGAGAGTGGCCAGCAAGGTGGAGTCGAACGATATATTAATTTGTTTCTTGAATCTCATCCATTTAGATCTATGGAAGTATTCACTAGTGAAGTTTCAGGCCGTGCTGCTGTCTCTCCAATTCAATCACCATTACCATCTGCAACGAGAGGAAGGTCGCCAAGACCTGCGCCATCGCCAACGATTCCACCGAACCACTATTATATGACCATTCCTGCTCCTACAATTTCTCCTATGGGTTCTTATAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGGGGATTGTGCGATATCATGTACCGAACCACTGACCTATACACCTCCCGGGACGTTGTGTGGGTGCGTGTGGCCAATTCAAGTCAAAATCAGTCTTGATGTTGCAATATATACGTTTTTCCCTCTGGTTTCGGAGCTGGCAGAGGAAATTGCAGACAGTATTGGTCTTCCGCCGTCTCCTCCGTTACCTCCTTCAGGTACTTCCTCCATTAACGATGGCTTGAACACGAGCAATACTAATATTGGAAATGCTATAAAACCTTTGGGAGTCGACGTGCCAAGAAGAAGGAAAGAAGGGCTTAGCGGAAACATGATCGCCGTGATTACTATATCGTCGTTCACTGCCTTTGTTATGTGTGTTGGACTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTTTGCACATCAGGCAGCACAAGTTCCGCAAAACTTGATAGCCTCACCTACAAAACCATCAGGCACTGCTGGATTAATGATGGCTGGAAGTGAACCTGGTTCTTCATCCCTGCCTCTCGATGCCGATCCTATGACGTATATAGGAGCTGCAAAGAACTTCACCTTGAAAGATATGAAGAAAGCTACCTACAACTTCGATGTTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCAGTTTGGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTCAAACGACATAATCAACACGGTATTCGGGAATTCTTGGCCGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAATTGATTGGTATCTGTACAGAAGATCAGATTCGCTGCCTTGTTTATGAATTGGTTCCGAACGGAAGCGTCGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCTCGGATGAAGATTGCCCTTGGTGCTGCTCGTGGCCTAGCCTATTTGCACGAAGACTCTAATCCTCGAGTTATTCATCGAGATTTCAAAGCTAGCAACATCCTGTTGGAATATGACTTCACACCGAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAGTATGCAATGACGGGGCACCTTCTTGTAAAGAGCGATGTCTACAGCTATGGTGTTGTCCTTCTCGAGCTACTTACGGGAAGAAAACCAGTTGACTTGTTGCTTCCACCGGGGCAAGAAAATCTTGTTGCTTGGGCTCGACCGCTTCTCACGAGCAAGGAGGGGTTAGATGTAATTACAGACCCAGCTATTAAGTCTGATATCTCTATTGATAGCTTGGCCAGAGTAGCTGCAATTGCTTCTATGTGTGTGCAACCCGAAGTGTCTCACAGACCATTTATGGGCGAGGTTGTTCAAGCTCTAAAGCTTGTTTGCAATGAGTTCGAAGAGACAAATGAGGCAGGTTCACAAAGTTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCAGGGGAAATACTAAACGCTACCGACACCTTGCACCCGTTTCCTTCAAAAAAAGAGACAAATGTAGGACTATCGGCATCGGATTTGATCAGCGCATCTGCAAGATTTGAAGGACAGGAATTAGTTTCCTTGAGATGGCATACATCAAACTCAGAACCCTTGAAAATGGGAAGGAAAGGGCAGTTCTGGCAGAAACTAAGAAGTTTATCACGAGGCAGCATCAGTGAACATGGCTTTTCTTCTAAATTTTGGCCTGGATTTCGTTAG 3717 46.27 MAAVAAPIFAPPAAFIAPAILANAAIPPTSTARNATVGFTAIPSHRIPAAAAPVISIPSIFNYNNLFNPQMTSIHHHHHSPPHHHLSKSTSTVSSSSSSTATTQACAACKYQRRKCVPDCILAPYFPHHRQRQFLNAHKLFGVSNITKIIKNLDPFQKEEAMRTIIFQSDVRSLDPVGGCYRIIRDLQRQIQYSKAELEMVLHQLAICKHQAAASVSAAAILDADHPMSGGFSGIENQFVEEGFVIGENENAESLDDEAAEVWGIQASEISPCSSLKSSIHDFDHINIHYHHQQFVKFHPDHHQFLHKSEEAGMVEIDNVILKEDSEPMQNDGEVEVLKYIFEKKVSDIVKKRRGRWSESISVVGKRDSRWQINCQIFEGRPALRWRLSAVKKERDLMKTAEISSAIATLMGFRSLFLLFGICFAVRSCSVCESAVIVPNGRSEARSSLTGETLKLSLRISVKLATSDLCVHYELSNLDNDHINSNVYCSYDAATRLDDSSRAPSIALPPTVPAKKWGHGHEFRHSRRKFRNNAPRRGYRASTPESGQQGGVERYINLFLESHPFRSMEVFTSEVSGRAAVSPIQSPLPSATRGRSPRPAPSPTIPPNHYYMTIPAPTISPMGSYKKRKKSMPPSQVMMLPPPPPNGDCAISCTEPLTYTPPGTLCGCVWPIQVKISLDVAIYTFFPLVSELAEEIADSIGLPPSPPLPPSGTSSINDGLNTSNTNIGNAIKPLGVDVPRRRKEGLSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVFAHQAAQVPQNLIASPTKPSGTAGLMMAGSEPGSSSLPLDADPMTYIGAAKNFTLKDMKKATYNFDVARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLLLPPGQENLVAWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNEAGSQSYSRDELLSYMDSKFGGISGEILNATDTLHPFPSKKETNVGLSASDLISASARFEGQELVSLRWHTSNSEPLKMGRKGQFWQKLRSLSRGSISEHGFSSKFWPGFR 1238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4659704 4674286 - CmaCh08G007730.1 Cma08g00773 299468

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00773 1238 ProSitePatterns Protein kinases ATP-binding region signature. 849 871 IPR017441 GO:0005524
Cma08g00773 1238 Pfam Lateral organ boundaries (LOB) domain 105 201 IPR004883 -
Cma08g00773 1238 SUPERFAMILY Protein kinase-like (PK-like) 823 1116 IPR011009 -
Cma08g00773 1238 PANTHER OS01G0750732 PROTEIN 563 702 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 581 612 - -
Cma08g00773 1238 PANTHER OS01G0750732 PROTEIN 701 1237 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 594 610 - -
Cma08g00773 1238 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Cma08g00773 1238 Gene3D Transferase(Phosphotransferase) domain 1 919 1140 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 516 548 - -
Cma08g00773 1238 Gene3D Phosphorylase Kinase; domain 1 814 918 - -
Cma08g00773 1238 CDD STKc_IRAK 849 1117 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 702 722 - -
Cma08g00773 1238 ProSiteProfiles LOB domain profile. 104 205 IPR004883 -
Cma08g00773 1238 PANTHER OS01G0750732 PROTEIN 701 1237 - -
Cma08g00773 1238 Pfam Protein tyrosine and serine/threonine kinase 846 1116 IPR001245 GO:0004672|GO:0006468
Cma08g00773 1238 PANTHER OS01G0750732 PROTEIN 563 702 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 73 97 - -
Cma08g00773 1238 MobiDBLite consensus disorder prediction 520 535 - -
Cma08g00773 1238 ProSiteProfiles Protein kinase domain profile. 843 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00773 - - - cpep:111778754 1050.04
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00773 Cma-Chr8:4659704 Cma17g00725 Cma-Chr17:5938256 8.51E-85 dispersed
Cma10g00720 Cma-Chr10:3251540 Cma08g00773 Cma-Chr8:4659704 2.86E-22 wgd
Cma11g00695 Cma-Chr11:3381612 Cma08g00773 Cma-Chr8:4659704 2.22E-17 wgd
Cma17g00721 Cma-Chr17:5922371 Cma08g00773 Cma-Chr8:4659704 3.10E-92 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma05g00742 . 1 217 AS2 family AT1G65620 65.0 2.5e-66 249.2
Cma20g01123 . 2 110 AS2 family AT1G65620 82.6 5.2e-48 188.3
Cma10g00105 CCT,CST,ECH 3 142 AS2 family AT1G65620 60.7 5.4e-45 178.3
Cma11g00077 CCT,CST,ECH 16 128 AS2 family AT1G65620 74.3 1.2e-44 177.2
Cma04g02687 CCT,ECH 1 118 AS2 family AT1G65620 68.6 6.6e-43 171.4
Cma11g01450 CCT,ECH 3 113 AS2 family AT1G65620 68.5 1.0e-40 164.1
Cma13g00866 CCT,CST,ECH 15 119 AS2 family AT1G65620 70.5 1.7e-38 156.8
Cma18g00185 CCT,CST,ECH 14 115 AS2 family AT1G65620 72.5 2.2e-38 156.4
Cma15g00157 CCT,ECH 38 146 AS2 family AT1G65620 64.2 7.0e-37 151.4
Cma20g01123 . 1 134 AS2 family AT5G66870 81.3 3.0e-58 223.0
Cma05g00742 . 5 112 AS2 family AT5G66870 77.8 5.5e-44 175.6
Cma10g00105 CCT,CST,ECH 1 113 AS2 family AT5G66870 69.0 8.2e-40 161.8
Cma11g00077 CCT,CST,ECH 16 128 AS2 family AT5G66870 68.1 8.2e-40 161.8
Cma04g02687 CCT,ECH 1 116 AS2 family AT5G66870 63.8 5.9e-38 155.6
Cma13g00866 CCT,CST,ECH 15 119 AS2 family AT5G66870 67.6 2.2e-37 153.7
Cma18g00185 CCT,CST,ECH 14 137 AS2 family AT5G66870 61.3 6.5e-37 152.1
Cma15g00140 CST 9 115 AS2 family AT5G66870 65.4 1.1e-36 151.4
Cma11g01450 CCT,ECH 7 113 AS2 family AT5G66870 66.4 1.1e-36 151.4
Cma04g02894 CST 49 157 AS2 family AT5G66870 63.3 2.5e-36 150.2
Cma20g01123 . 4 118 AS2 family AT2G23660 70.4 2.4e-44 176.8
Cma05g00742 . 6 112 AS2 family AT2G23660 69.2 6.2e-40 162.2
Cma10g00105 CCT,CST,ECH 8 113 AS2 family AT2G23660 65.1 6.9e-39 158.7
Cma11g00077 CCT,CST,ECH 23 128 AS2 family AT2G23660 64.2 6.9e-39 158.7
Cma04g02687 CCT,ECH 5 115 AS2 family AT3G27650 86.5 3.0e-54 208.8
Cma11g01450 CCT,ECH 4 114 AS2 family AT3G27650 82.0 2.2e-49 192.6
Cma11g00077 CCT,CST,ECH 8 129 AS2 family AT3G27650 73.0 1.1e-48 190.3
Cma10g00105 CCT,CST,ECH 4 114 AS2 family AT3G27650 80.2 2.4e-48 189.1
Cma13g00866 CCT,CST,ECH 10 120 AS2 family AT3G27650 71.2 9.0e-43 170.6
Cma18g00185 CCT,CST,ECH 14 119 AS2 family AT3G27650 73.6 4.4e-42 168.3
Cma05g00742 . 3 112 AS2 family AT3G27650 68.2 4.4e-42 168.3
Cma20g01123 . 4 112 AS2 family AT3G27650 67.9 3.2e-40 162.2
Cma11g00077 CCT,CST,ECH 18 187 AS2 family AT5G63090 66.9 8.8e-58 220.7
Cma10g00105 CCT,CST,ECH 3 131 AS2 family AT5G63090 82.7 4.4e-57 218.4
Cma04g02687 CCT,ECH 1 114 AS2 family AT5G63090 84.2 1.0e-50 197.2
Cma13g00866 CCT,CST,ECH 6 119 AS2 family AT5G63090 78.1 1.7e-48 189.9
Cma11g01450 CCT,ECH 2 116 AS2 family AT5G63090 79.1 2.8e-48 189.1
Cma18g00185 CCT,CST,ECH 12 125 AS2 family AT5G63090 75.4 1.1e-47 187.2
Cma05g00742 . 3 134 AS2 family AT5G63090 65.0 1.3e-45 180.3
Cma20g01123 . 2 110 AS2 family AT5G63090 70.6 1.3e-40 163.7
Cma13g00447 . 16 143 AS2 family AT5G63090 60.2 9.2e-39 157.5
Cma02g00725 . 5 119 AS2 family AT5G63090 63.5 1.2e-38 157.1
Cma02g00024 . 12 115 AS2 family AT5G63090 68.3 2.0e-38 156.4
Cma04g01102 CST,ECH 4 106 AS2 family AT5G63090 69.9 2.3e-37 152.9
Cma04g00134 CST,ECH 4 140 AS2 family AT5G63090 55.4 5.0e-37 151.8
Cma04g01102 CST,ECH 3 114 AS2 family AT2G30130 91.1 1.4e-53 206.8
Cma04g00134 CST,ECH 3 135 AS2 family AT2G30130 78.9 2.3e-53 206.1
Cma02g00725 . 2 138 AS2 family AT2G30130 72.3 9.8e-52 200.7
Cma13g00447 . 11 131 AS2 family AT2G30130 68.6 3.1e-45 179.1
Cma20g00329 . 31 156 AS2 family AT2G30130 70.1 3.4e-44 175.6
Cma02g00024 . 12 118 AS2 family AT2G30130 75.7 5.8e-44 174.9
Cma15g00433 . 13 121 AS2 family AT2G30130 68.8 2.5e-39 159.5
Cma10g00105 CCT,CST,ECH 8 111 AS2 family AT2G30130 68.3 1.4e-37 153.7
Cma11g00077 CCT,CST,ECH 23 163 AS2 family AT2G30130 55.3 1.4e-37 153.7
Cma04g01074 CCT,CST,ECH 48 150 AS2 family AT2G30130 69.9 3.1e-37 152.5
Cma02g00871 . 34 141 AS2 family AT2G30130 67.6 6.8e-37 151.4
Cma01g00534 . 35 140 AS2 family AT2G30130 63.2 1.5e-36 150.2
Cma05g00742 . 7 109 AS2 family AT2G30130 67.0 1.5e-36 150.2
Cma13g00447 . 13 173 AS2 family AT1G31320 74.1 8.1e-66 247.3
Cma02g00024 . 1 164 AS2 family AT1G31320 72.5 9.3e-62 233.8
Cma04g01102 CST,ECH 2 122 AS2 family AT1G31320 66.7 3.9e-44 175.3
Cma04g00134 CST,ECH 2 113 AS2 family AT1G31320 70.5 4.3e-43 171.8
Cma02g00725 . 6 122 AS2 family AT1G31320 67.5 1.1e-41 167.2
Cma19g01089 . 2 113 AS2 family AT1G31320 67.9 2.9e-39 159.1
Cma15g00433 . 13 124 AS2 family AT1G31320 68.1 2.5e-38 156.0
Cma02g00871 . 34 143 AS2 family AT1G31320 70.0 3.2e-38 155.6
Cma04g01074 CCT,CST,ECH 48 160 AS2 family AT1G31320 61.9 6.1e-37 151.4
Cma10g00105 CCT,CST,ECH 9 120 AS2 family AT1G31320 62.5 1.0e-36 150.6
Cma11g00077 CCT,CST,ECH 24 126 AS2 family AT1G31320 67.0 1.4e-36 150.2
Cma01g00534 . 32 150 AS2 family AT2G28500 76.5 1.2e-48 190.7
Cma02g00871 . 30 149 AS2 family AT2G28500 76.7 1.8e-47 186.8
Cma15g00433 . 10 128 AS2 family AT2G28500 71.4 2.4e-44 176.4
Cma04g00272 . 44 136 AS2 family AT2G28500 87.1 2.5e-41 166.4
Cma20g00467 . 32 125 AS2 family AT2G28500 85.1 3.2e-41 166.0
Cma04g01242 . 54 145 AS2 family AT2G28500 84.8 1.2e-40 164.1
Cma13g00195 . 32 123 AS2 family AT2G28500 78.3 5.1e-39 158.7
Cma02g00725 . 6 116 AS2 family AT2G28500 66.7 8.7e-39 157.9
Cma04g00134 CST,ECH 5 117 AS2 family AT2G28500 64.6 8.2e-37 151.4
Cma04g01102 CST,ECH 5 113 AS2 family AT2G28500 66.1 1.4e-36 150.6
Cma01g00534 . 26 150 AS2 family AT1G07900 68.8 6.7e-45 177.9
Cma04g00272 . 22 199 AS2 family AT1G07900 63.4 1.9e-44 176.4
Cma02g00871 . 4 149 AS2 family AT1G07900 63.0 4.3e-44 175.3
Cma15g00433 . 4 174 AS2 family AT1G07900 54.9 9.7e-44 174.1
Cma04g01242 . 54 208 AS2 family AT1G07900 66.9 4.8e-43 171.8
Cma20g00467 . 32 196 AS2 family AT1G07900 64.5 1.1e-42 170.6
Cma13g00195 . 19 196 AS2 family AT1G07900 58.4 4.1e-42 168.7
Cma02g00024 . 1 164 AS2 family AT1G16530 56.0 1.5e-45 179.9
Cma13g00447 . 12 121 AS2 family AT1G16530 69.4 1.1e-40 163.7
Cma02g00725 . 2 159 AS2 family AT1G16530 52.8 2.8e-39 159.1
Cma04g01074 CCT,CST,ECH 46 177 AS2 family AT1G16530 54.9 2.0e-37 152.9
Cma04g01102 CST,ECH 5 110 AS2 family AT1G16530 68.2 4.5e-37 151.8
Cma04g01074 CCT,CST,ECH 8 157 AS2 family AT2G30340 69.5 5.4e-56 215.3
Cma15g00157 CCT,ECH 22 150 AS2 family AT2G30340 76.3 1.1e-53 207.6
Cma04g00113 CCT,CST,ECH 31 153 AS2 family AT2G30340 71.5 2.8e-49 193.0
Cma02g00024 . 9 126 AS2 family AT2G30340 60.2 5.6e-37 152.1
Cma15g00157 CCT,ECH 27 162 AS2 family AT2G40470 80.0 1.1e-58 223.8
Cma04g01074 CCT,CST,ECH 32 157 AS2 family AT2G40470 84.1 8.0e-57 217.6
Cma04g00113 CCT,CST,ECH 31 153 AS2 family AT2G40470 80.5 1.1e-53 207.2
Cma02g00024 . 9 129 AS2 family AT2G40470 62.0 1.8e-40 163.3
Cma04g00134 CST,ECH 5 141 AS2 family AT2G40470 56.7 1.1e-37 154.1
Cma13g00447 . 17 127 AS2 family AT2G40470 63.1 1.1e-37 154.1
Cma02g00725 . 6 122 AS2 family AT2G40470 59.8 1.8e-37 153.3
Cma15g00140 CST 1 178 AS2 family AT3G11090 59.6 1.6e-47 186.4
Cma04g02894 CST 48 156 AS2 family AT3G11090 79.8 1.7e-44 176.4
Cma02g01755 CST 1 139 AS2 family AT2G42440 70.5 7.5e-49 191.4
Cma19g00080 CST 1 115 AS2 family AT2G42440 72.2 3.6e-43 172.6
Cma08g00271 . 13 128 AS2 family AT2G42440 64.4 1.4e-39 160.6
Cma08g00953 CST 32 143 AS2 family AT2G42440 63.8 7.8e-38 154.8
Cma17g00028 . 8 122 AS2 family AT2G42440 61.5 1.0e-37 154.5
Cma02g01756 CST 14 138 AS2 family AT2G42440 60.8 2.3e-37 153.3
Cma19g00079 CST 31 138 AS2 family AT2G42440 67.6 8.6e-37 151.4
Cma02g01755 CST 4 117 AS2 family AT3G58190 83.3 2.5e-51 199.5
Cma19g00080 CST 4 113 AS2 family AT3G58190 78.2 1.5e-45 180.3
Cma08g00271 . 13 128 AS2 family AT3G58190 70.3 8.5e-44 174.5
Cma08g00953 CST 32 134 AS2 family AT3G58190 75.7 8.8e-41 164.5
Cma19g00079 CST 31 138 AS2 family AT3G58190 70.4 2.6e-40 162.9
Cma02g01756 CST 12 123 AS2 family AT3G58190 67.9 2.6e-40 162.9
Cma17g00028 . 8 111 AS2 family AT3G58190 71.2 1.3e-39 160.6
Cma14g01981 . 29 146 AS2 family AT3G58190 61.9 4.5e-37 152.1
Cma17g00029 CST 33 132 AS2 family AT3G58190 69.0 1.3e-36 150.6
Cma02g01755 CST 1 142 AS2 family AT2G31310 57.6 1.3e-40 163.7
Cma19g00079 CST 31 226 AS2 family AT2G42430 53.4 4.6e-54 208.8
Cma02g01756 CST 18 192 AS2 family AT2G42430 51.3 5.8e-49 191.8
Cma17g00028 . 2 146 AS2 family AT2G42430 59.2 1.8e-42 170.2
Cma02g01755 CST 3 109 AS2 family AT2G42430 73.8 1.5e-41 167.2
Cma08g00953 CST 32 134 AS2 family AT2G42430 77.7 2.0e-41 166.8
Cma14g01981 . 31 142 AS2 family AT2G42430 66.1 7.1e-39 158.3
Cma19g00080 CST 3 94 AS2 family AT2G42430 79.3 1.2e-38 157.5
Cma17g00028 . 13 201 AS2 family AT4G00220 61.3 7.5e-59 224.6
Cma08g00953 CST 32 250 AS2 family AT4G00220 56.1 4.1e-57 218.8
Cma14g01981 . 23 198 AS2 family AT4G00220 54.0 7.5e-43 171.4
Cma17g00029 CST 43 226 AS2 family AT4G00220 54.3 7.0e-41 164.9
Cma08g00953 CST 32 247 AS2 family AT2G45420 67.9 3.7e-70 262.3
Cma17g00028 . 13 216 AS2 family AT2G45420 63.8 4.9e-70 261.9
Cma14g01981 . 35 149 AS2 family AT2G45420 75.7 1.5e-47 187.2
Cma19g00079 CST 32 134 AS2 family AT2G45420 79.6 1.5e-42 170.6
Cma02g01756 CST 19 125 AS2 family AT2G45420 72.0 6.2e-41 165.2
Cma02g01755 CST 7 109 AS2 family AT2G45420 71.8 2.0e-39 160.2
Cma08g00271 . 13 119 AS2 family AT2G45420 68.2 4.4e-39 159.1
Cma19g00080 CST 7 95 AS2 family AT2G45420 77.5 1.2e-36 151.0
Cma08g00953 CST 32 133 AS2 family AT3G03760 82.4 1.7e-41 167.2
Cma17g00028 . 9 114 AS2 family AT3G03760 77.4 3.2e-40 162.9
Cma19g00079 CST 31 133 AS2 family AT3G03760 76.7 1.8e-38 157.1
Cma02g01755 CST 2 111 AS2 family AT3G03760 70.0 3.9e-38 156.0
Cma02g01756 CST 16 125 AS2 family AT3G03760 69.1 4.3e-37 152.5
Cma17g00028 . 7 145 AS2 family AT4G00210 64.0 7.0e-46 181.4
Cma08g00953 CST 32 143 AS2 family AT4G00210 72.3 1.9e-43 173.3
Cma14g01981 . 29 137 AS2 family AT4G00210 66.1 4.4e-40 162.2
Cma02g01755 CST 2 107 AS2 family AT4G00210 67.0 7.0e-38 154.8
Cma08g00271 . 13 117 AS2 family AT4G00210 66.7 1.6e-37 153.7
Cma17g00029 CST 40 240 AS2 family AT2G45410 52.2 1.2e-46 183.7
Cma08g00953 CST 32 137 AS2 family AT2G45410 72.6 3.3e-44 175.6
Cma14g01981 . 31 137 AS2 family AT2G45410 66.4 2.9e-40 162.5
Cma19g00079 CST 32 134 AS2 family AT2G45410 68.9 6.1e-38 154.8
Cma02g01755 CST 3 102 AS2 family AT2G45410 67.0 1.2e-36 150.6
Cma04g00202 CST 18 157 AS2 family AT5G06080 59.3 2.0e-43 172.9
Cma04g01170 CST 21 123 AS2 family AT5G06080 73.8 1.6e-40 163.3
Cma02g01755 CST 1 122 AS2 family AT5G06080 62.3 1.4e-36 150.2
Cma17g00721 . 75 183 AS2 family AT3G13850 74.3 6.8e-43 171.8
Cma08g00773 . 104 212 AS2 family AT3G13850 71.6 6.3e-41 165.2
Cma14g00811 . 1 162 AS2 family AT1G68510 65.9 2.0e-59 226.5
Cma01g00384 . 1 162 AS2 family AT1G68510 62.9 9.3e-57 217.6
Cma11g00267 CST 1 169 AS2 family AT1G68510 60.8 1.1e-54 210.7
Cma10g00235 CST 1 140 AS2 family AT1G68510 68.3 9.7e-54 207.6
Cma18g01019 . 1 154 AS2 family AT1G68510 59.9 1.1e-49 194.1
Cma03g00932 CST 1 104 AS2 family AT1G68510 63.5 1.4e-39 160.6
Cma07g00659 CST 1 104 AS2 family AT1G68510 62.5 8.8e-39 157.9
Cma10g00235 CST 1 136 AS2 family AT1G67100 74.6 1.1e-60 230.7
Cma11g00267 CST 1 134 AS2 family AT1G67100 75.0 2.4e-60 229.6
Cma18g01019 . 1 131 AS2 family AT1G67100 66.9 1.4e-49 193.7
Cma03g00932 CST 1 110 AS2 family AT1G67100 66.4 3.1e-44 176.0
Cma07g00659 CST 1 110 AS2 family AT1G67100 66.4 4.1e-44 175.6
Cma01g01793 CST 1 104 AS2 family AT1G67100 66.3 3.3e-38 156.0
Cma09g00281 CST 1 110 AS2 family AT1G67100 60.0 8.2e-37 151.4
Cma14g00811 . 1 302 AS2 family AT3G02550 56.1 8.9e-80 294.3
Cma01g00384 . 1 304 AS2 family AT3G02550 57.5 7.5e-79 291.2
Cma11g00267 CST 1 238 AS2 family AT3G02550 52.5 8.3e-62 234.6
Cma10g00235 CST 1 152 AS2 family AT3G02550 70.4 1.2e-60 230.7
Cma18g01019 . 1 138 AS2 family AT3G02550 65.7 8.1e-49 191.4
Cma03g00932 CST 1 129 AS2 family AT3G02550 56.8 6.9e-40 161.8
Cma07g00659 CST 1 104 AS2 family AT3G02550 68.3 2.0e-39 160.2
Cma07g00659 CST 1 199 AS2 family AT5G67420 64.4 1.4e-71 266.9
Cma03g00932 CST 1 232 AS2 family AT5G67420 59.8 4.2e-71 265.4
Cma01g01793 CST 1 153 AS2 family AT5G67420 59.5 5.2e-45 178.7
Cma14g00811 . 3 112 AS2 family AT5G67420 67.3 5.7e-44 175.3
Cma01g00384 . 3 112 AS2 family AT5G67420 66.4 2.2e-43 173.3
Cma09g00281 CST 1 117 AS2 family AT5G67420 65.0 8.2e-43 171.4
Cma11g00267 CST 3 112 AS2 family AT5G67420 61.8 1.3e-40 164.1
Cma10g00235 CST 3 112 AS2 family AT5G67420 62.7 2.9e-40 162.9
Cma18g01019 . 3 106 AS2 family AT5G67420 63.5 2.7e-38 156.4
Cma03g00932 CST 1 231 AS2 family AT3G49940 61.0 4.6e-70 261.9
Cma07g00659 CST 1 199 AS2 family AT3G49940 64.4 1.1e-68 257.3
Cma01g01793 CST 1 133 AS2 family AT3G49940 65.0 7.9e-46 181.4
Cma01g00384 . 3 157 AS2 family AT3G49940 54.1 3.9e-45 179.1
Cma09g00281 CST 1 127 AS2 family AT3G49940 64.1 7.4e-44 174.9
Cma14g00811 . 3 157 AS2 family AT3G49940 52.2 9.6e-44 174.5
Cma11g00267 CST 3 112 AS2 family AT3G49940 60.9 6.4e-40 161.8
Cma10g00235 CST 3 112 AS2 family AT3G49940 61.8 1.1e-39 161.0
Cma18g01019 . 3 106 AS2 family AT3G49940 66.3 1.2e-38 157.5
Cma03g00932 CST 1 232 AS2 family AT4G37540 57.2 6.0e-67 251.5
Cma07g00659 CST 1 177 AS2 family AT4G37540 65.0 1.4e-60 230.3
Cma09g00281 CST 1 134 AS2 family AT4G37540 62.7 4.2e-44 175.6
Cma01g00384 . 3 113 AS2 family AT4G37540 69.4 9.3e-44 174.5
Cma14g00811 . 3 160 AS2 family AT4G37540 53.2 1.5e-41 167.2
Cma11g00267 CST 3 113 AS2 family AT4G37540 61.3 1.8e-39 160.2
Cma10g00235 CST 3 113 AS2 family AT4G37540 62.2 4.1e-39 159.1
Cma18g01019 . 3 125 AS2 family AT4G37540 56.9 2.2e-37 153.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005183 0 1 1 0 1 1 2 1 1 1 1 1 2 1 0 2 1 0 2 1 1 0 1 1 1 1 1 1 1 1 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35523 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Cma TF
68759 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Cma PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma08g00773 Cma_Chr08 FPKM 7.05526 7.713889 4.673948 3.859985 7.193431 7.519723 6.066539 7.971605 7.660602 7.314203