Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma08g00784 | ATGGCGGACCGTTCTTCCGATCGCGAAATTGATTCAGGCTTTGATCAGGGCTCATCCCAACCGCGTCTTTACAACCCTTACAAGGATCTCCAGGTTCCTTACCGAAACTTCCAGCTTCCAACATCACCGGAGTTTCTCTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTATACCGGTTGCGGTTACCTCGCTGGTGCAGTCGGCGGGGCGTCTACGGGCTTCGTCTCCGGCGTCAAATCTTTTGAATCAGGTGATACTATGAAACTTCGGATCAATCGGATCCTGAACTCTTCTGGTCATTCAGGGCGTCTCTGGGGGAATCGGCTCGGTGTGATTGGGTTACTATATGCTGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGACGTGTGGAACTGTGTCGCAGCGGGACTTGGCACCGGTGCGCTTTATCGTGCGGCAAGAGGAGTGAGATCAGCGGCGGTGGCCGGTGCTATTGGCGGCGTTGTGGTTGGAGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATTTGA | 573 | 55.32 | MADRSSDREIDSGFDQGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRYVPI | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4723282 | 4723854 | - | CmaCh08G007840.1 | Cma08g00784 | 299479 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma08g00784 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
| Cma08g00784 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 17 | 190 | - | - | |
| Cma08g00784 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cma08g00784 | 190 | PANTHER | TIM23 | 17 | 190 | IPR045238 | GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma08g00784 | Cma-Chr8:4723282 | Cma10g01008 | Cma-Chr10:5260986 | 2.20E-59 | dispersed | |
| Cma17g00711 | Cma-Chr17:5874218 | Cma08g00784 | Cma-Chr8:4723282 | 3.28E-118 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma08g00784 | K17794 | - | csv:101221925 | 327.02 |