Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00785 ATGGCTGAAGAAGAAACTAACGAATCCGTTACCACCACCCACACGGTGATCGCCATTAACAGGGACAAGAACAGTCAATCCGCGGTGAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACTCCGGCGATTGCATCCTCATCCATGTTCGGAGTCAGAGCTTGCATCCCCAGGATGCGGATACGGTTCCTAAGGAGTATCGTCCACCGACTGATGCTGAATTGCATCAGTTCTTCCTTCCATACCGAGGATTCTGTGCACGAAAAGGAATAGTTGCAAAGGAGATTGTCATCCATGACATTGATGTTCCAAGTGCACTTATTCACTATATCAATAAACACTCCATTAGCAACATTGTTGTGGGTGCTTCCAGCCGGAATGCTTTTACGAGGACGTTCAAACATCCAGATGTCTCAACATGTTTGCTCAAATCAACTCCAGAATCATGTTCTGTATATGTCATATCTAGAGGGAAAGTTCATACTAAGAAATTGAGAAAGCGATACCAGTCACTAACTGATGGGAAAGAAGAACCATCCGGAACTCTTCATACTGACAAGTCTCTATCAAAAATACAAAACACGAAAGATAAAAGCAGGCATCGTTATAGCAACAGTGTTGATTCACTGTCAAGCGTTAGTGACTTTTCAGGGCCTCTCAGTTTCAGATCAACTGGCACATCATCCTCTGAGAGCTTAGATTTTTCGTTAACCTCAGAGAGTAATTCAAAGAGCTTTGTTACCTCTAACACAGCAGCTTCCATAGAATCTGAGATGAGAAAGTTAAGGTTTGAACTCAAAGGGAAGATGGAAATGTATGAATCAGCTTGCAAGGAAGCTCTAGTAGCAAAACAAAAGGCAAATGAACTCGCACAATTGAAGATGAAAGAAGAGAAAAAGTTTGAGCGAGGTAAATCTGCAGAAGAGGTTTTAACAGCATTGTCAGAGCTTGAGAAGCAGAAAAACAAGGCTGGGACAGAAGCAGCTCTAATGGCACAAAGGCTGGAAGAATTAGAGATCCAGAAAAAACGAAATATTGCTGAAAAAAAGGCTAAGATTGAGGCGGAGGAGAAGCAGAAAACAATTGATTTATTTGAACGCGCAAATATCTGCTTCAAACGATACAGAATTGACGAGATCGAAGCAGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGGGGTTATGGACCTGTTTACCAAGCCTTTCTCGATCATACTTCTGTTGCCATTAAGATGTTGAGCCCAGAGAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTTTAAGCCGCATGAGGCATCCACACATGGTTCTCCTTATGGGTGCCTGCCCAGAATATGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGTTTAGAAGACCGTCTTTTCCGAAAAGACGACACTCCTCCAATCCCTTGGAAAACTCGTTTCAGGATAGCTGCTGACATTGCCACTGCACTTCTGTTCCTTCATCAAATGAAGCCCGAACCCGTGGTGCATCGTGATCTCAAACCAGCAAACATTCTCTTAGATCAGAACTATGTGAGCAAGATAGGCGATGTGGGTTTGGCCAGGCTAGTCCCGCCATCGGTTGCTGATAGTGTCACTCAATATCACATGACGGCTGCAGCTGGAACCTTCTGTTACATTGATCCAGAATACCAACAAACAGGAATGCTAGGTGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTCCAGCTCATCACTGCAAGGTCACCAATGGGTCTTTCATATCAGGTTGAGGAGGCCATTGAACACGGCACATTCCCACAGATACTTGATCCTACAATTACAGATTGGCCCATTCAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGACCCGACCTCGGTACCGTTCTATTGCCTGAACTAATAAGGCTAAAAAAATTGGGATTGAGCGGAATACCACCAAAGAGGAAGCTCACAGCTTTTGGGAGAGCACATGGTCAAAGCACTTCTAACTCAGCTCCACATTTCAAGGGATCAGAAAATGAGATCAATGTAAGAAAAAAGTGGCAGCGACTGAAATTCAGTCCGAGTTTTTGGAGCCAGAAGGGTGGTATTGGTTTGAATACCATTTCTCAGCAGGAAAAGGAAAATTGGAGCTCGAAGAACAACAGCGGTGCAAAAGTCTCAACCATACCACTGAGTGGAAACCCAATTGTAGAACTGAGGAAGTGGCGGCACACCAGTGAACGCTGTTGGTCATGTGTAAGTTGTGTTTCTCCTACTACTTCTGGGTTGAAAAAACCACACTCATTTGCATAA 2346 43.61 MAEEETNESVTTTHTVIAINRDKNSQSAVKWAVEHLFNRKNSGDCILIHVRSQSLHPQDADTVPKEYRPPTDAELHQFFLPYRGFCARKGIVAKEIVIHDIDVPSALIHYINKHSISNIVVGASSRNAFTRTFKHPDVSTCLLKSTPESCSVYVISRGKVHTKKLRKRYQSLTDGKEEPSGTLHTDKSLSKIQNTKDKSRHRYSNSVDSLSSVSDFSGPLSFRSTGTSSSESLDFSLTSESNSKSFVTSNTAASIESEMRKLRFELKGKMEMYESACKEALVAKQKANELAQLKMKEEKKFERGKSAEEVLTALSELEKQKNKAGTEAALMAQRLEELEIQKKRNIAEKKAKIEAEEKQKTIDLFERANICFKRYRIDEIEAATDHFNESNKIGEGGYGPVYQAFLDHTSVAIKMLSPERSHGQRQFQQEIEVLSRMRHPHMVLLMGACPEYGCLVYEYMENGSLEDRLFRKDDTPPIPWKTRFRIAADIATALLFLHQMKPEPVVHRDLKPANILLDQNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGTFPQILDPTITDWPIQDTLGLAQLALKCCELRKRDRPDLGTVLLPELIRLKKLGLSGIPPKRKLTAFGRAHGQSTSNSAPHFKGSENEINVRKKWQRLKFSPSFWSQKGGIGLNTISQQEKENWSSKNNSGAKVSTIPLSGNPIVELRKWRHTSERCWSCVSCVSPTTSGLKKPHSFA 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4725043 4729555 - CmaCh08G007850.1 Cma08g00785 299480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00785 781 CDD STK_N 15 158 - -
Cma08g00785 781 Gene3D HUPs 2 157 IPR014729 -
Cma08g00785 781 Coils Coil 307 359 - -
Cma08g00785 781 MobiDBLite consensus disorder prediction 170 204 - -
Cma08g00785 781 Pfam Universal stress protein family 16 146 IPR006016 -
Cma08g00785 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Cma08g00785 781 PANTHER OS02G0152300 PROTEIN 14 664 - -
Cma08g00785 781 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 14 664 - -
Cma08g00785 781 SUPERFAMILY Protein kinase-like (PK-like) 369 646 IPR011009 -
Cma08g00785 781 MobiDBLite consensus disorder prediction 170 213 - -
Cma08g00785 781 Gene3D Transferase(Phosphotransferase) domain 1 460 655 - -
Cma08g00785 781 ProSiteProfiles Protein kinase domain profile. 387 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma08g00785 781 Gene3D Phosphorylase Kinase; domain 1 352 459 - -
Cma08g00785 781 Pfam Protein kinase domain 387 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma08g00785 781 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 156 - -
Cma08g00785 781 SMART serkin_6 387 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g01403 Cma-Chr5:10466879 Cma08g00785 Cma-Chr8:4725043 2.29E-137 dispersed
Cma08g00785 Cma-Chr8:4725043 Cma05g00422 Cma-Chr5:1899419 0 dispersed
Cma17g00710 Cma-Chr17:5869007 Cma08g00785 Cma-Chr8:4725043 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68760 PF00069 Pkinase 3.30E-42 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00785 - - bhj:120085014 1135.94