Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00827 ATGGCTGCTGCTCTTCTTCGAGCACTCGTCCTCTTCTCTCTCCTTCTCCCACTTTATTCTTCTTCTTCTTCTTCTTCTTCTTCCGCCGATGCTTCCAAGAAAACTTTCATTGTGCAGGTTCACGGAGATTCCAAGCCTTCCATTTTTCCAACTCACAAGCACTGGTACGAGTCATCTCTAGCCTCCATCACTTCCAATAAGGCTACAGATGCTACTTCATCTTCTTCCAATGGACCCATCCTTCACACTTATGAAAATGTATTCCATGGCTTCTCTGCAAAGCTCTCACCTTCTGAGGTTGAGAAGCTTCAAACCCTCCCTCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCACACAACTCGTTCCCCTGAGTTCCTTGGCCTCAAGACTACCGATAGTGCTGGCTTGCTCAAAGAGTCCGACTTTGGATCTGACCTTGTGATCGGAGTTATCGATACGGGTATTTGGCCGGAGAGGCAGAGTTTCAACGACCGAGATCTGGGTCCTATTCCTTCCGAATGGAAAGGGCAGTGTGTTGCGGCTAAGGACTTTCCAGCCACTTCTTGCAACCGTAAACTTATTGGGGCTCGATTCTTCTGCAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCTCTGAGTACCGCTCGCCTCGAGATTCTGATGGTCATGGTACTCATACAGCGTCCATTGCTGCAGGCCGTTATGTGTTTCCAGCTTCAACTTTAGGCTATGCTCGTGGTAAAGCGGCCGGAATGGCTCCTAAGGCTCGTCTTGCTGCCTATAAAGTCTGCTGGAACGCCGGCTGCTACGACTCTGACATTCTTGCTGCGTTTGATGCTGCCGTTTCCGATGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCATACTACCTCGATGCCATCGCTATAGGGGCTTTTAGAGCGGTGGAAGCCGGCGTTTTTGTCTCGGCATCAGCCGGTAACGGTGGTCCAGGTGGGCTCACTGTGACTAATGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGGGATTTTCCTGCTGATGTTAAATTGGGAAATGGAAGGGTTATACTTGGTACCAGTGTCTATGGCGGACCGGCTTTGGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACTGAAGGCGGGGATGGGTATTCTTCGTCTCTATGCTTAGAAGGTTCATTAAACCCCAATTCGGTGAACGGAAAGATAGTACTTTGTGATAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAGAAGGCTGGAGGATTGGGAATGATTTTAGCTAATGGGGTCTTTGACGGCGAGGGTTTAGTAGCTGACTGCCACGTACTACCTGCCACCGCCGTCGGTGCAACCGGCGGCGACGAGATTCGTAAGTATATTGCAGAAGCAGTGAAGTCTCAGTCACCGCCAACCGCAACAATTTTGTTCAAGGGAACTCGGCTTGGGGTCAGGCCAGCACCGGTTGTTGCTTCCTTTTCATCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTGAAGCCTGATGTGATTGCGCCTGGTTTGAACATTCTTGCTGCTTGGCCTGATAAAATTGGACCTTCTGGAATTCCTACTGACAAGCGTGCCATAGAGTTCAACATACTTTCCGGCACGTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCTCTACTTAAGGCCGCACATCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACCACTGCTTATACTTTGGACAACCGGGGTGAGACAATGTTGGACGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCAATGGACCCTGGTTTAATCTATGACCTGAACACATATGATTATGTTGATTTCTTGTGTAATTCCAACTACACCGCTAAGAATATCCAAGTAATTACGGGGAAGATAGCAGATTGTAGCGGGGCAAAAAGGGCTGGCCATACTGGAAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTGACCAACGTTGGGGACGCCAATTCAATCTATAAGGTAACAATAAAGCCACCAAGTGGAATTTCAGTGACAGTGGAGCCAGAAAGGCTGGCGTTTAGAAGGGTTGGGCAAAAGTTGAGCTTTTTGGTTAGGGTCCATGCAATGGCTGTTAAACTTTCCGCTGGAAGCTCTAGCATGAAGAGTGGCTATGTAGTTTGGACTGATGGAAAGCACGTAGTCACAAGTACTTTGGTTGTCACCATGCAGCAACCTCTGCAGTAG 2376 48.78 MAAALLRALVLFSLLLPLYSSSSSSSSSADASKKTFIVQVHGDSKPSIFPTHKHWYESSLASITSNKATDATSSSSNGPILHTYENVFHGFSAKLSPSEVEKLQTLPHIASIIPEQVRHPHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSEWKGQCVAAKDFPATSCNRKLIGARFFCSGYEATNGKMNETSEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNSVNGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGATGGDEIRKYIAEAVKSQSPPTATILFKGTRLGVRPAPVVASFSSRGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRAIEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNSNYTAKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVTIKPPSGISVTVEPERLAFRRVGQKLSFLVRVHAMAVKLSAGSSSMKSGYVVWTDGKHVVTSTLVVTMQQPLQ 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5012638 5015013 - CmaCh08G008270.1 Cma08g00827 299522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00827 791 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Cma08g00827 791 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Cma08g00827 791 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Cma08g00827 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 14 790 - -
Cma08g00827 791 Pfam Subtilase family 146 613 IPR000209 GO:0006508|GO:0008236
Cma08g00827 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 121 IPR037045 -
Cma08g00827 791 Pfam Fibronectin type-III domain 680 784 IPR041469 -
Cma08g00827 791 Gene3D - 649 787 - -
Cma08g00827 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Cma08g00827 791 CDD PA_subtilisin_like 360 493 - -
Cma08g00827 791 Gene3D - 354 501 - -
Cma08g00827 791 SUPERFAMILY Protease propeptides/inhibitors 34 119 - -
Cma08g00827 791 Pfam PA domain 387 474 IPR003137 -
Cma08g00827 791 SUPERFAMILY Subtilisin-like 121 636 IPR036852 GO:0004252|GO:0006508
Cma08g00827 791 SUPERFAMILY PA domain 411 466 IPR046450 -
Cma08g00827 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 14 790 - -
Cma08g00827 791 CDD Peptidases_S8_3 119 598 IPR034197 -
Cma08g00827 791 ProSiteProfiles Serine proteases, subtilase domain profile. 125 632 - -
Cma08g00827 791 Gene3D Peptidase S8/S53 domain 148 645 IPR036852 GO:0004252|GO:0006508
Cma08g00827 791 Pfam Peptidase inhibitor I9 35 119 IPR010259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00827 Cma17g00657 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00247 Cma-Chr2:1104197 Cma08g00827 Cma-Chr8:5012638 0 dispersed
Cma08g00827 Cma-Chr8:5012638 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma18g00570 Cma-Chr18:3838893 Cma08g00827 Cma-Chr8:5012638 2.05E-85 dispersed
Cma05g00140 Cma-Chr5:625072 Cma08g00827 Cma-Chr8:5012638 2.21E-178 transposed
Cma17g00657 Cma-Chr17:5523236 Cma08g00827 Cma-Chr8:5012638 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00827 - - cmax:111494531 1510.35