Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g00898 | ATGGCTTCTCTCCCTCTCTTCATCCTCATTGTGGTCTTCACTCTCCCATCGGTCTCCCTTGCCGTCACGAAAGCTGAAGTTTCATATCTCATTGGCCGTCAACTTTTGGCTCTAAGAGAACACGATGAACTCCCAGATGACTATAAATATGATGCTGAAATTGATCCTCATGAAACTTTCATAAATGAGAGGTTGAAGAAGGCTTTTGTTGCCCTCAAAGCTTGGAAATCTGCCATATATTCTGACCCAAATAACTTCACTAAAAATTGGATTGGCAATGATGTCTGTCTTTATAGGGGCGTTTTTTGTACTACGGCACTTGATGACTCCACCGTTGAGGTTGTGGCTGGCATTGATTTGAATCATGCTGATATTGCAGGCTACTTGCCACCCGAGCTTGGACTCTTGACAGATTTGGCTTTGTTCCATATCAACTCTAATAGATTTTGTGGGATAATTCCTCGTAGCTTTTCTAAGCTGACTCTCATGTTTGAGTTTGATGTCAGTAACAACCGCTTCGTTGGCCATTTTCCAGAGGTTGTCTTTCATTGGCGTATCGCTAAGTTCCTCGATCTTAGGTTCAACGACTTTGAAGGAGAAGTCCCACCGGCACTCTTCACTATGACCTTCGACGCCATATTCTTAAACAACAATAGATTCAGTTCCTTAATCCCGGATACCATTGGAAACTCCACTGTCTCTCTTGTGTCCTTTGCGTACAACTACTTCTATGGCTGCATTCCCAGTTCTATCGGCCAAATGAGCAGCCTCAATCAGGTTCTCTTTATTGGCAACAAACTCCATGGCTGTCTCCCAGTCGAGATTGGAACACTTGTCAATCTAACGGTGCTTGATATCAGCAATAATAGCTTTCCTGGCTGGTTGCCCACATTGTCGGGGCTTAAGAATTTGCAGAGTTTGGATGTTAGTTACAATGAACTTAGAGGCTCTGTTTCTGGGGAGATATGCAAATTGCCTCATTTGCTTAACTTTAATTTCTCCTTTAATTATTTTGATGGGCAAGATGCAGAGTGTGTGACACCTAAAGATTCAAAAAAGATTTTTGATGATGCTCATAATTGCTTGCTTAATCGCCCGGGGCAGAGAGATGCTGAGACTTGTAGCTCTTTTATGATGAAATCGGTGGAATGTAGAAATTGTGGTGAAGATCCTACTACAAGGTCTCCAGTGGTGGTTCGTACGCCGATACCAACTCCAGAATCTCATCATGCAGTTCCATCCTCACCTCATCATCATCATGTAGTTCCACCAACTCCAGAATCGAGCGACACCCCGGTTCCGCAAGTTGAAACTCATCAACCTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGACACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGACACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGACACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACACATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGACACTCATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGACACACATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACACATCACACTGCAGTTCCACCGTCGGTTCCGCAAGTTGAAACACATCACACTGCCGTTCCACCGTCGGTTTCCACTGCCGTTCCACCGTCGGTTTCCACTGCCGTTCCACCGTCGGTTTCCACTGCAGTTCCACCGTCGGTTTCCACTGCCGTTCCACCGTCGGTTTCCACTACCGTTCCACCGTCGGTTTCCACTGCCGTTTCACCGTCGGTTTCCACTACCGTTCCACCGTCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGTCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGGCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGGCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGGCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGGCGGTTCCGCAAGTCGAAACTCATCACCATGCAGTTCCACCGGCGGTTCCGCAAGTCGAAACTCCATCATCCTCAACTACATCCTCACCTCTTCCTCCACCAACTCCAAAATCGGGCGAACCCCCTATACCACAAGTTGAAACTCCATCATCCTCGGATACATCCTCACCTCCTCCACCAACTCCAGAATCTGGCGAACCCCCTGTTCAAGTTGAAACTCCACCATCCTCAGATACATCCTCACCTCCTCCATCAACTCCAGAATCTGGCGAACCCCCTGTTCAAGTTGAAACTCCACCATCCTCAGACACATCCTCACCTCCTCTTCCACCAACTCCAGAATCGGGCGAACCCCCTGTTCCACAAGTTGAAACTCCACCATCCTCAGACACATCATCCCCTCCTATTCCACCAACTCCAGAATCGGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACCGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCTACTCTCCCCCACCCCCGACAGCGTCTCCACCGCCACCCGTCCACTCTCCCCCTCCTCCTACTGCATCTCCACCTCCTCCCGAGCACTCTCCACCTCCTCCGACCGCATCTCCTCCTCCTCCTCATGGTGCTTCTCCACCACCGGCGATCGAAGACCTCATCCTACCACCAAACATTGGTTTCCAATATTCATCTCCACCACCACCACAGTTTCTCGGATATTGA | 4275 | 57.12 | MASLPLFILIVVFTLPSVSLAVTKAEVSYLIGRQLLALREHDELPDDYKYDAEIDPHETFINERLKKAFVALKAWKSAIYSDPNNFTKNWIGNDVCLYRGVFCTTALDDSTVEVVAGIDLNHADIAGYLPPELGLLTDLALFHINSNRFCGIIPRSFSKLTLMFEFDVSNNRFVGHFPEVVFHWRIAKFLDLRFNDFEGEVPPALFTMTFDAIFLNNNRFSSLIPDTIGNSTVSLVSFAYNYFYGCIPSSIGQMSSLNQVLFIGNKLHGCLPVEIGTLVNLTVLDISNNSFPGWLPTLSGLKNLQSLDVSYNELRGSVSGEICKLPHLLNFNFSFNYFDGQDAECVTPKDSKKIFDDAHNCLLNRPGQRDAETCSSFMMKSVECRNCGEDPTTRSPVVVRTPIPTPESHHAVPSSPHHHHVVPPTPESSDTPVPQVETHQPAVPPSVPQVETHHTAVPPSVPQVETHHTAVPPSVPQVETHHTAVPPSVPQVDTHHTAVPPSVPQVDTHHTAVPPSVPQVDTHHTAVPPSVPQVETHHTAVPPSVPQVDTHHTAVPPSVPQVDTHHTAVPPSVPQVETHHTAVPPSVPQVETHHTAVPPSVSTAVPPSVSTAVPPSVSTAVPPSVSTAVPPSVSTTVPPSVSTAVSPSVSTTVPPSVPQVETHHHAVPPSVPQVETHHHAVPPAVPQVETHHHAVPPAVPQVETHHHAVPPAVPQVETHHHAVPPAVPQVETHHHAVPPAVPQVETPSSSTTSSPLPPPTPKSGEPPIPQVETPSSSDTSSPPPPTPESGEPPVQVETPPSSDTSSPPPSTPESGEPPVQVETPPSSDTSSPPLPPTPESGEPPVPQVETPPSSDTSSPPIPPTPESASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVYSPPPPTASPPPPVHSPPPPTASPPPPEHSPPPPTASPPPPHGASPPPAIEDLILPPNIGFQYSSPPPPQFLGY | 1424 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5563777 | 5568808 | - | CmaCh08G008980.1 | Cma08g00898 | 299593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 1184 | 1288 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 1101 | 1202 | - | - | |
Cma08g00898 | 1424 | SUPERFAMILY | L domain-like | 71 | 363 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 752 | 768 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 781 | 964 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 1030 | 1132 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 828 | 1403 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 1184 | 1288 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 1101 | 1202 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 802 | 819 | - | - | |
Cma08g00898 | 1424 | Gene3D | Ribonuclease Inhibitor | 68 | 360 | IPR032675 | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 403 | 663 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 781 | 964 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 1030 | 1132 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 778 | 794 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 593 | 658 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 1283 | 1421 | - | - | |
Cma08g00898 | 1424 | MobiDBLite | consensus disorder prediction | 740 | 1424 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 932 | 1035 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 932 | 1035 | - | - | |
Cma08g00898 | 1424 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 6 | 660 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 6 | 660 | - | - | |
Cma08g00898 | 1424 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 1283 | 1421 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01874 | Cma-Chr1:12291107 | Cma08g00898 | Cma-Chr8:5563777 | 1.73E-141 | dispersed | |
Cma08g00898 | Cma-Chr8:5563777 | Cma17g00446 | Cma-Chr17:2660615 | 1.17E-178 | dispersed | |
Cma08g00896 | Cma-Chr8:5557269 | Cma08g00898 | Cma-Chr8:5563777 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g00898 | - | - | cmax:111494877 | 1240.71 |