Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00983 ATGAAAATAAAACACAGAAAACCTCAAAATTTTCCCCATCTTCCCGTCACAAAACAGAGAAGGATGATGAACCAACCTGGAAAATGGGTGGCGCTGATGGCGGCCATATGGATTCAGGCATTTACCGGCACAAATTTTGATTTCCCCTCTTATTCTTCCAATCTGAAGGCGGCTTTGGGGATGTCGCAGGTAGAGCTCAACTATCTGGCGGTGGCTTCTGACGTCGGTAAGGCCTTTGGGTGGTGCTCCGGCATCGCTCTCTTGTATTTTCCTTCGTGGGTGGTGATGCTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTTCAATGGCTTCTCCTTCAAGGGATTGTATCTCTGCCTTACTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGCTGGTTTAATACGATCTGCTATGTCTCCTGCATCCAAAAGTTCCCAGCCAATCGCGCGCTTGCACTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTTTACACCCTAATGACCAATGCAGTAGACCCTAATGATGCAAGCTTGTACCTTCTCCTAAATGCATTGGTTCCTCTCATAATCTCTGTCGTTGCCTTCTTCCCAATCCTTCATCAGCCACCGGCTCAGCCGTCGTCTGCCGATGCCACCCGCAATGACTCCCTCACTTTCATCTGCTTATACATCACCGCAGTTATCACAGGCCTGTATCTAATCACCTTCAATTCCACGCCTTCCAGCAAGTACGGGGCCCAAATTCTGTTAGCTGGGGCTTTTGCCCTGTTACTAGTTCCTCTTTGTCTGCCAGGAATTTGGAGTACTCACAAATGGTTGTTTCGGATCGCATCCACTGGCTTGAGTAGTGTTCTTCACTTTAGATTCAACCTTGTCAATCATGAGCTTCAACAAGAGCTCATCAATGTTGAATCAGAAAGAAGTGGCACGAAGGTCATCACCCCTTGTGATTATAAAGAGAAGGAAAGCATTTCAAGGAAGATGATGGGGAAAGAGAATTTGACAGTTCTTGAAGAAGAGCATTCAGCTAAAATGCTCGTACGACGCTTGGACTTTTGGCTCTATTTTGTTGCATACTTTTGTGGTGGGACAATTGGGTTGGTTTACAGCAACAATCTTGGGCAAATCTCGCAGTCACTAGGATACAGTTCGTTAACAAGCTCACTTGTAACACTCTACTCGTCTTGCTCCTTCTTTGGGCGGCTAATCTCAGCAGGCCCAGATTTCATGCGTGAAAAGGTGCACTTCGCCAGAACTGGATGGCTAGCCCTAGCACTAGTGCCAAATCCAATCGCCTTCATTCTACTCGCTGCATCAGGCAGCGAGATCGCATTACAAATTGGCACTGGCTTGATCGGTCTAAGCTCGGGATTCATGTTCTCAGCCTCGGTCTCAATCACATCAGAGTTATTCGGACCAAACAGCTCAGGCGTCAATCACAACATCCTCATCACCAACATCCCTCTCGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTTTCATATGACTCAACTGCCGGAAGTTCAAACCAAACTGCGGCGACGCTTGGGGACGTGGTGGTGTGCATCGGCCGGAAATGCTATCTACAAACCTTCATATGGTGGGCTTGCATCTCCATCGTCGGCCTCGCTTCTTGCTTCTTGCTTTTCCGACGGACGAAACCGGCATACGACCGCCATTACGAGAGTAACCCAAGCAAGACACAGCCATTTTAG 1743 48.42 MKIKHRKPQNFPHLPVTKQRRMMNQPGKWVALMAAIWIQAFTGTNFDFPSYSSNLKAALGMSQVELNYLAVASDVGKAFGWCSGIALLYFPSWVVMLMAASMGFLGYGLQWLLLQGIVSLPYSMVYLLCLLAGCSICWFNTICYVSCIQKFPANRALALSLIVSFNGVSAALYTLMTNAVDPNDASLYLLLNALVPLIISVVAFFPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLITFNSTPSSKYGAQILLAGAFALLLVPLCLPGIWSTHKWLFRIASTGLSSVLHFRFNLVNHELQQELINVESERSGTKVITPCDYKEKESISRKMMGKENLTVLEEEHSAKMLVRRLDFWLYFVAYFCGGTIGLVYSNNLGQISQSLGYSSLTSSLVTLYSSCSFFGRLISAGPDFMREKVHFARTGWLALALVPNPIAFILLAASGSEIALQIGTGLIGLSSGFMFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVSYDSTAGSSNQTAATLGDVVVCIGRKCYLQTFIWWACISIVGLASCFLLFRRTKPAYDRHYESNPSKTQPF 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6150201 6152924 - CmaCh08G009830.1 Cma08g00983 299678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00983 580 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 574 - -
Cma08g00983 580 Pfam Nodulin-like 28 273 IPR010658 -
Cma08g00983 580 PANTHER NODULIN-LIKE/MFS TRANSPORTER 23 574 - -
Cma08g00983 580 SUPERFAMILY MFS general substrate transporter 20 565 IPR036259 -
Cma08g00983 580 Gene3D MFS general substrate transporter like domains 314 533 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00718 Cma-Chr1:3776247 Cma08g00983 Cma-Chr8:6150201 3.10E-86 dispersed
Cma08g00983 Cma-Chr8:6150201 Cma16g00519 Cma-Chr16:2656463 0 dispersed
Cma08g00983 Cma-Chr8:6150201 Cma13g00022 Cma-Chr13:250198 4.18E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00983 - - csv:101222963 942.954