Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g00991 ATGAGCGGCGGAGGTGAAGGAACGTCGCTGCAATTCACTCCGACATGGGTTGTCGCCGCCGTCTGCAGCGTCATCGTCGCCATTTCCCTCGCCGTAGAGCGTCTCCTTCACTTCCTTGGTACATACCTCAAGAAGAAGAATCAGAAGCCGCTGAATGAAGCTCTACAGAAAGTTAAAGAAGAATTGATGCTCTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCGCTATCTCGAAATGGTGTGTTCCTGAGAGTTTGACTGAGCATTTACTTCCGTGTGATCTGAAAGATAAACCTAAAGCTGAAGAAGATGAACATGGCTCATCGACGACGGAACATTTTCAAACATTCTTTGTTTCAAGCATTTCTGGCACGGCTAGGCGCCTTCTATCTGAGGGATCGGCTTCACAGAATGGCTACTGTGCTCATAAGGATAAGGTGCCATTGCTATCACTTGAAGCATTGCATCATCTACATATTTTTATCTTCATCCTGGCTATTGTCCACGTGACATTTTGTGTTCTCACTGTGGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGGCTTGGGAGGATTCTATTGCAAAAGAAGAGAATTACGATGCCGAAGACGTTCTAGAACCAAAAGTCACCCATGTCCATCAGCATGCTTTTATCAAAGACCACTTCCAGGGCATTGGTAAAGATTCAACTCTTCTTGGTTGGTTGCGTTCCTTCCTCAAGCAATTTTATGCTTCTGTAACAAAAGCAGATTATGTGACGTTACGACTTGGTTTCATTATGACACACTGCAGGGGAAACCCCAAGTTTAATTTTCACAAGTACATGATACGTGCCCTTGAGGATGATTTCAAGCATGTTGTCGGTATCAGTTGGTATCTTTGGATCTTCGTAGTTGTCTTCTTGCTCCTTAATATTAACGGCTGGCATACATATTTCTGGATAGCATTCATTCCTCTTATTCTTCTGCTTGCTGTGGGAACCAAGCTGGAACATGTGATAGCCCAGCTGGCTCATGAGGTTGCAGAGAAGCATGTAGCAATCGAAGGGGATCTGGTAGTCCAACCATCCGATGATCACTTTTGGTTTCAGCGACCCCGTATCGTTCTCTTCTTGATCCATTTTATACTTTTCCAAAACGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTCGACTCGTGCATCATGGGAAAAGTCGCCTATATCATTCCTAGGCTTATTATTGGGGTGTTTGTTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCTATCGTCACGCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGAAGACCATGTACAAGTTGGTCTAGTTGGGTGGGCTCAGAAGGTGAAGAAAAGGAAGGGACTGAAAGCAGCAGCTACTAATGGCTCCAGCCAAGGAAGCAAGGAAGACGGGTCTAGTGTGGGGATTCAGCTGGGAAATGTTCTGCGCAAGGCTTCTACTGCACCAACAGAAATTAAGCCTGATGCCTCCAAATCCAGTGATCTGCCTTAG 1548 45.03 MSGGGEGTSLQFTPTWVVAAVCSVIVAISLAVERLLHFLGTYLKKKNQKPLNEALQKVKEELMLLGFISLLLTVFQGAISKWCVPESLTEHLLPCDLKDKPKAEEDEHGSSTTEHFQTFFVSSISGTARRLLSEGSASQNGYCAHKDKVPLLSLEALHHLHIFIFILAIVHVTFCVLTVVFGGLKIRQWKAWEDSIAKEENYDAEDVLEPKVTHVHQHAFIKDHFQGIGKDSTLLGWLRSFLKQFYASVTKADYVTLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLLLNINGWHTYFWIAFIPLILLLAVGTKLEHVIAQLAHEVAEKHVAIEGDLVVQPSDDHFWFQRPRIVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGKVAYIIPRLIIGVFVQVLCSYSTLPLYAIVTQMGSSFKKAIFEDHVQVGLVGWAQKVKKRKGLKAAATNGSSQGSKEDGSSVGIQLGNVLRKASTAPTEIKPDASKSSDLP 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6184235 6189344 - CmaCh08G009910.1 Cma08g00991 299686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g00991 515 PANTHER MLO-LIKE PROTEIN 1 500 - -
Cma08g00991 515 Pfam Mlo family 8 487 IPR004326 GO:0006952|GO:0016021
Cma08g00991 515 PANTHER MLO-LIKE PROTEIN 1 1 500 IPR004326 GO:0006952|GO:0016021
Cma08g00991 515 MobiDBLite consensus disorder prediction 492 515 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00991 Cma-Chr8:6184235 Cma02g00883 Cma-Chr2:5245432 1.28E-140 dispersed
Cma20g01051 Cma-Chr20:7843989 Cma08g00991 Cma-Chr8:6184235 1.29E-157 transposed
Cma17g00044 Cma-Chr17:201164 Cma08g00991 Cma-Chr8:6184235 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g00991 K08472 - csv:101211868 907.131