Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01063 ATGGCCGGTGAGGTAGCGGTAGAGGGTGCTGCGGCGGCGACTGAAGTACCCGATTCCAATCAGCAGTCCCACAAATTAGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCGCGGCCGAAGCAAGGCGCCGCTTGGGGCTCCTCTCTGCGCAAGGTCTATACCTTCGACACCGTCGAGGAATTTTGGTGTTTGTACGATCAGATACCCAAGCCGAGCAAGTTGCCGGCGAATGCAGATTTTCACTTGTTCAAATCTGGAGTTGAGCCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTTGATAGCATGTGGCTGGAAACGTTGATGGCTTTAATTGGGGAACAATTCGAGGAGTCTGATGAGATTTGTGGCGTCGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCATTATGGACAAAGAATGCAACAAATGAGGCTGCTCAGATGAGCCTTGGTAGGAAATGGAAGGAGATCATCGACGTCACCGACAAGATATCCTTCAGCTTTCATGAGGACTTGAGGAGGGAAAAGTCGGCTAAATCTCGATACAGTGTCTGA 600 50.0 MAGEVAVEGAAAATEVPDSNQQSHKLERKWTFWFDNQSRPKQGAAWGSSLRKVYTFDTVEEFWCLYDQIPKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDSMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKNATNEAAQMSLGRKWKEIIDVTDKISFSFHEDLRREKSAKSRYSV 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6648359 6651955 + CmaCh08G010630.1 Cma08g01063 299758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01063 199 SUPERFAMILY eIF4e-like 18 192 IPR023398 -
Cma08g01063 199 PANTHER BNAA08G29940D PROTEIN 11 191 - -
Cma08g01063 199 MobiDBLite consensus disorder prediction 1 22 - -
Cma08g01063 199 Pfam Eukaryotic initiation factor 4E 25 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma08g01063 199 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 199 IPR023398 -
Cma08g01063 199 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 11 191 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma08g01063 199 ProSitePatterns Eukaryotic initiation factor 4E signature. 80 103 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g01063 Cma17g00145 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01063 Cma-Chr8:6648359 Cma18g00446 Cma-Chr18:2462683 2.32E-75 dispersed
Cma17g00145 Cma-Chr17:719790 Cma08g01063 Cma-Chr8:6648359 2.64E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01063 K03259 - csv:101208495 376.326