Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01197 ATGAGAGCTTCAAATCATGGCTTCTTCTCCCTCTTTTCTGTACTGCTTCTCAGTACTCTCCTTGCTGTTCAAGCCGTCCCCAATGGCGCTCTGAGCCTTAATTTCTATTGGCGAACCTGCCCCAAAGCTTTGAGAATTATCCGAGACACCACCTTCCGACTCGCTCGATCGAATCCCAGTCTCGGAGCACAACTCCTCCGAGTTCAATTCCACGACTGCTTTGTTCGGGGATGCGATGCATCAGTTCTGCTAGATAGTACCACCGGAAACCCATCGGAGAAGGAAGCAAGACCGAACTTATCGTTATTAGGGTTCGATGCCATTGACACAATCAAGTCGGAGGTTGAGAAGGCTTGCCCTGGAGTTGTCTCTTGTGCCGACATTCTTGCCGTTGCTGCTCGTGATGCTGTTTCCTTTCCGTTAAAAAACCGGCAGCTGTGGCCAGTTTTAACCGGAAGAAGAGATGGAACTGTTTCGCGATCATCAGAAGTTACCGGCAATATCCCGTCGCCGTTCTCTAATTTCACCACTCTTAAGCAAATCTTTGAGAATAAAGGCCTTACCGTGAGCGATCTGGTGATTTTATCAGGTGGGCATACAATTGGAGTAGCTCATTGTGGCACATTCTCAAGGAGGCTCTACAACTTCACAGGCCAAGGGGACGCAGATCCTTCATTAAATCCAATCTACGCCAACTTTCTAAGACAAAAATGTCCAAATCCAGCTGATTCTTCAATTACTGTAGAAATGGACCCAAAGAGTTCACGTTCATTTGACACTGATTATTTCAAGATCCTCACACAGCACAAAGGTTTGTTTCAATCCGACGCTGCGCTCTTGACCGACAACTCATCGTCTCGGATCGTCAAAGAGTTGCAGAAGCCCAAAGCTTTCTTCCCTAGCTTTGCTAACTCCATGTTGAAGATGTCAGCCATTGAAGTCCTCACTGGCAAGAATGGTGAAATCAGGAAACGATGTCGTTTTGTTAATTGA 993 46.73 MRASNHGFFSLFSVLLLSTLLAVQAVPNGALSLNFYWRTCPKALRIIRDTTFRLARSNPSLGAQLLRVQFHDCFVRGCDASVLLDSTTGNPSEKEARPNLSLLGFDAIDTIKSEVEKACPGVVSCADILAVAARDAVSFPLKNRQLWPVLTGRRDGTVSRSSEVTGNIPSPFSNFTTLKQIFENKGLTVSDLVILSGGHTIGVAHCGTFSRRLYNFTGQGDADPSLNPIYANFLRQKCPNPADSSITVEMDPKSSRSFDTDYFKILTQHKGLFQSDAALLTDNSSSRIVKELQKPKAFFPSFANSMLKMSAIEVLTGKNGEIRKRCRFVN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7347661 7349705 - CmaCh08G011970.1 Cma08g01197 299892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01197 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cma08g01197 330 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cma08g01197 330 PANTHER PEROXIDASE 25-RELATED 7 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 Gene3D Peroxidase, domain 2 169 309 - -
Cma08g01197 330 ProSiteProfiles Plant heme peroxidase family profile. 30 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PANTHER PEROXIDASE 7 329 - -
Cma08g01197 330 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 Pfam Peroxidase 52 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma08g01197 330 CDD secretory_peroxidase 31 329 IPR033905 GO:0004601|GO:0042744
Cma08g01197 330 Gene3D - 34 330 - -
Cma08g01197 330 SUPERFAMILY Heme-dependent peroxidases 31 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01197 Cma-Chr8:7347661 Cma11g01838 Cma-Chr11:12266469 2.46E-108 dispersed
Cma08g01197 Cma-Chr8:7347661 Cma20g00633 Cma-Chr20:2948709 3.55E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01197 K00430 - csv:101215642 502.286