Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g01201 | ATGGCGTCTGAAATGATTGTCGAATCAGGCTCGTCGATAATAGATTTTGGGATGGAGTTAGTCGCGGATCATACTTCGGTGGTTTCTTTAAACTTATTTGTAGCTCTTCTTTGTGGTTGCATTGTTGTTGGTCATTTGTTAGAGGAAAACCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGGTTGTGTACCGGCATCATCATATTGCTAACAACTAGAGGGAAAAGTTCGCATTTATTTTTGTTCAATGAAGAGCTTTTCTTTATCTATCTCCTTCCGCCTATCATTTTCAATGCCGGTTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCCAGAAAATGAATATTGGTTCTCTTGATCTTGGAGATTATCTTGCTATTGGAGCTATTTTTTCTGCAACAGACTCTGTTTGTACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTCCTGTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACTTCTGTTGTGCTATTCAATGCAATCCAGAACTTTGATCTGTCTCACATGAATTCAAGCATCATTCTGCAATTCATTGGGAACTTTTTGTATCTGTTCATTGCAAGTACCGTGCTGGGAATTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGTGAAGTTGCTCTTATGATACTCATGGCGTACTTTTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCACTATACATGGCATAACGTAACTGAAAGTTCCAGAGTTACTACAAAGCATGCTTTCGCCACTCTTTCTTTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATCGAGAAGTGGAGATTTGTTAGCCACAGTCCGGGGAAATCAATTGGGGTGAGCTCAATACTGTTGGGACTGGTTCTGGTTGGAAGAGCAGCCTTCGTTTTTCCATTATCCTCCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAAAAACTCAACTTGGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCCGTTTCAATGGCACTTGCATATAATCAGTTCACCAGGTCAGGCCACACCCATTTACCAGGCAATGCAATCATGATCACCAGTACCATCACAGTTGTTCTTTCCAGCACAGTGTTTTTTGGAATGATGACAAAACCACTGATAGGGATTTTGCTACCCCAACCAAAATACACAATGAGCATGCTGTCTTCGGAACCCTCATCCCCAAAATCCTTCACAGTCCCACTCCTCACCAACGACGACCCAAACAGCCATTCCCATTCCCCTCTGGGGCTGTTCCTCCGAATCCCGGCCCATACGGTTCACCATTATTGGCGGAGATTCGACGACGCCTTCATGCGCCCTGTTTTTGGAGGGAGGGGCTTTGTGCCCTTCGTCCCTGGCTCCCCTACCGAAGACCCCAACCAACAATGGCAAACTGAAGGACCACTTGAAGCCGCTAAATAA | 1641 | 43.69 | MASEMIVESGSSIIDFGMELVADHTSVVSLNLFVALLCGCIVVGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIILQFIGNFLYLFIASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSSLSNLTKKSSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLSSTVFFGMMTKPLIGILLPQPKYTMSMLSSEPSSPKSFTVPLLTNDDPNSHSHSPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTEDPNQQWQTEGPLEAAK | 546 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7385483 | 7391030 | - | CmaCh08G012010.1 | Cma08g01201 | 299896 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g01201 | 546 | MobiDBLite | consensus disorder prediction | 526 | 546 | - | - | |
Cma08g01201 | 546 | Gene3D | - | 150 | 201 | - | - | |
Cma08g01201 | 546 | PANTHER | SODIUM/HYDROGEN EXCHANGER 3 | 17 | 537 | - | - | |
Cma08g01201 | 546 | Pfam | Sodium/hydrogen exchanger family | 32 | 445 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cma08g01201 | 546 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 17 | 537 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cma08g01201 | 546 | PRINTS | Na+/H+ exchanger signature | 88 | 99 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma08g01201 | 546 | PRINTS | Na+/H+ exchanger signature | 102 | 116 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma08g01201 | 546 | PRINTS | Na+/H+ exchanger signature | 117 | 125 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma08g01201 | 546 | PRINTS | Na+/H+ exchanger signature | 157 | 167 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g01201 | Cma-Chr8:7385483 | Cma18g00624 | Cma-Chr18:5526159 | 9.44E-44 | dispersed | |
Cma01g01101 | Cma-Chr1:8073976 | Cma08g01201 | Cma-Chr8:7385483 | 0 | transposed | |
Cma10g01092 | Cma-Chr10:7256436 | Cma08g01201 | Cma-Chr8:7385483 | 0 | transposed | |
Cma11g01251 | Cma-Chr11:8327881 | Cma08g01201 | Cma-Chr8:7385483 | 0 | transposed | |
Cma17g01131 | Cma-Chr17:7885629 | Cma08g01201 | Cma-Chr8:7385483 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g01201 | - | - | cmos:111436756 | 1015.37 |