Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g01245 | ATGCGAAATCTTACCATCCACCCTGCTTGGGACTCAACATTCTCGCTCGCAGGAAAAGGAGAAGGAAAAAGCCTTCAACAAGAAGACGATTCGCGATTTCCCGTTTCTCGAATTTTCTGTTTCTGTTTCTGTTTCTGTTTCTGTTTCTGTTTCTGTGGATTAACAATCTTCAATTGTGGCCGAATTCGATCAAACGAGGCTGCTGTGGCGTTGGACGGATTAGGAATGGGATCGGAGCAGTTGATGGCCGGAGGTGGGCCTCGATATGTTCAAATGCAATCGGAGCAGCCTACAGCTTCGATGTCGTCGTTTTTCTCGTTTCATCATGACGCTCCTGAGCCAACGAGGATTTTCGATGAATTGCCGAAGGCCTCAATTATTTCCGTTTCTCGCCCGGATGCCGGCGATATCAGTCCGATGCTTCTTTCTTACACAATCGAATGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTCTATTTACATTTTGCACTAAAGAAACGGGCATTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACGACAGTGATCCAAGATGAGGATGGACCAGATGATGAAGCCAATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCGTCCAGTGCTGCCCTGCCTATCATTCGGCCTGCCTTAGGAAGGCAGCATTCTATGTCTGATAGAGCTAAGACTGCAATGCAAGGGTACCTGAATCACTTCTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTTATGGTGAAGCATCTACCTAAAATTGCACGGGAAGATGACGCTAGGAAATGCTGCCTATGCCGGTGTTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAGCCTGGTTTTTTGGCCTTATTGGGAGATCCTTTTGACACTCAACCAATGGATATAATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTATCTTTGGCAAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAGTATTAGGATAAGAGCAAAGAACGGATCCAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCGGGACTGAGGCCTCCTGAGGGATGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACAGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGGTCAAGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCAGAGATTTTCATTTGCGGCTGGTGGCTTTGTCCAGAATTGTATCTGCGGCGTCCTTTTATTTCAAATGCTTCATCTAGGCTCGATGCTTTGCTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCCTTAAAGATTAACAGTGTTTATAGCAAGAAAAAACTTCTAGGCATCCATGAGAATGTGAGAGTATTACGCTATCCTGACCACTTCTCCAGTGGTGTGTATTTATGGTCCCACCATGAAAAACTTGTCATTGTCGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGTGATCGTCCTCCTTCAGTATGGCCCGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTGGATCGTGGTAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACTTAGCTAGACATTTTGTCCAACGCTGGAATTATGCTAAGAGAAACAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATACCCGAGAATTGGAGGTTGAAAGGAAGAGTTTTGACAATTCTCAAGAATCAACAGTACAGGATTCATTTTCTCGAGGATCATCTTCTCACGATATTCCTTTGCTTTTACCTCAAGAGGCTGATGGACAGGATTCTCAAAATGAAGGTCCAAAATCAAATGGACTGGAGCCCATTGCTAATCCCCTCGATCAGCCTAGTAAGATCAGCAGCAGTCTCTCGTTCTCTTTTAGGAAGATCAAAGTTGAACCCTTAGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTCGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACACATCATCGTGTCAAAAGCTCAGAGTTGGAGTGGTGGGAAACACAAGACAGGGGACATGGTGGCTTTGCAGATGAATCCGGACAAGTTGGTCCGTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAATGGTCTGCTGGGACGAGTCAAACTGAAGAGAGCATTCACATTGCGTACTGCTCTCTTATAGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGGAATCGTGTTTTAGAAGCATTATACCGTCGCATAATGAGAGCTTACCGTGAAAAGAAAATTTTTAGGGTCATTATTGTAATTCCACTATTGCCTGGATTTCAGGGAGGACTGGATGACAGTGGTGCAGCATCGGTTAGAGCAATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAAAATTCAATATTCCATAATCTTTATGATCTTCTTGGTTCAAAAGTTCATGATTATATATCATTTTATGGCCTCAGATCTTATGGTAAACTGTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATCGTAGATGATTGTATTGCTTTGATTGGATCGGCTAACATCAATGACAGGAGTTTACTCGGTTCTAGAGATTCTGAGATTGCTATTGTGATTGAAGATAAGGAACTTATCAATTCATATATGGGAGGACAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTCCGCCTCTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCTGGACAGATCAATCAAATAGTTGACCCAGTTTCTGACTCAACCTACAAGGATACATGGATGGGAACTGCTAAGACGAACACGACAATATACCAAGATGTATTTTCTTGTCTACCCAACGACCTCATAAATTCCAGAGCTGGACTGAGGCAAAGTGTGGCTTTCTGGAAAGAGAGGTTGGGGCACACCACAATAGATTTAGGAATTGCACCGGAGAGGCTTGAGTTTTACAAGAATGGAGAAATTGAAAGGATTGATCCAATGGAGAGATTAAGTTCAGTGAAGGGACATCTTGTCTCCTTCCCATTGGAATTCCTGAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA | 3564 | 42.79 | MRNLTIHPAWDSTFSLAGKGEGKSLQQEDDSRFPVSRIFCFCFCFCFCFCFCGLTIFNCGRIRSNEAAVALDGLGMGSEQLMAGGGPRYVQMQSEQPTASMSSFFSFHHDAPEPTRIFDELPKASIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTVIQDEDGPDDEANPLHHDESSKNRDVPSSAALPIIRPALGRQHSMSDRAKTAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAREDDARKCCLCRCFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRSIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGQAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDRPPSVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDLARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNTRELEVERKSFDNSQESTVQDSFSRGSSSHDIPLLLPQEADGQDSQNEGPKSNGLEPIANPLDQPSKISSSLSFSFRKIKVEPLGPDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVKSSELEWWETQDRGHGGFADESGQVGPCASCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFVYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLYDLLGSKVHDYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIVDDCIALIGSANINDRSLLGSRDSEIAIVIEDKELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVSDSTYKDTWMGTAKTNTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGIAPERLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH | 1187 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7606619 | 7617015 | + | CmaCh08G012450.1 | Cma08g01245 | 299940 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g01245 | 1187 | SUPERFAMILY | Phospholipase D/nuclease | 824 | 1033 | - | - | |
Cma08g01245 | 1187 | Gene3D | Endonuclease Chain A | 808 | 1041 | - | - | |
Cma08g01245 | 1187 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 984 | 1011 | IPR001736 | GO:0003824 | |
Cma08g01245 | 1187 | MobiDBLite | consensus disorder prediction | 203 | 225 | - | - | |
Cma08g01245 | 1187 | SMART | PH_update | 291 | 419 | IPR001849 | - | |
Cma08g01245 | 1187 | CDD | PLDc_vPLD1_2_yPLD_like_1 | 445 | 589 | - | - | |
Cma08g01245 | 1187 | Pfam | PLD-like domain | 857 | 1032 | IPR025202 | - | |
Cma08g01245 | 1187 | MobiDBLite | consensus disorder prediction | 202 | 228 | - | - | |
Cma08g01245 | 1187 | PANTHER | PHOSPHOLIPASE | 106 | 1184 | - | - | |
Cma08g01245 | 1187 | Gene3D | Endonuclease Chain A | 438 | 701 | - | - | |
Cma08g01245 | 1187 | SUPERFAMILY | Phospholipase D/nuclease | 397 | 671 | - | - | |
Cma08g01245 | 1187 | MobiDBLite | consensus disorder prediction | 693 | 749 | - | - | |
Cma08g01245 | 1187 | CDD | PH_PLD | 268 | 415 | - | - | |
Cma08g01245 | 1187 | PIRSF | PLD_euk | 91 | 713 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Cma08g01245 | 1187 | PIRSF | PLD_euk | 748 | 1187 | IPR016555 | GO:0004630|GO:0006654|GO:0048017 | |
Cma08g01245 | 1187 | PANTHER | PHOSPHOLIPASE D | 106 | 1184 | IPR015679 | - | |
Cma08g01245 | 1187 | SMART | pld_4 | 552 | 579 | IPR001736 | GO:0003824 | |
Cma08g01245 | 1187 | SMART | pld_4 | 984 | 1011 | IPR001736 | GO:0003824 | |
Cma08g01245 | 1187 | Pfam | Phospholipase D Active site motif | 552 | 579 | IPR001736 | GO:0003824 | |
Cma08g01245 | 1187 | Gene3D | - | 317 | 415 | IPR011993 | - | |
Cma08g01245 | 1187 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 552 | 579 | IPR001736 | GO:0003824 | |
Cma08g01245 | 1187 | SUPERFAMILY | PH domain-like | 324 | 415 | - | - | |
Cma08g01245 | 1187 | CDD | PLDc_vPLD1_2_yPLD_like_2 | 844 | 1028 | - | - | |
Cma08g01245 | 1187 | Coils | Coil | 173 | 193 | - | - | |
Cma08g01245 | 1187 | MobiDBLite | consensus disorder prediction | 698 | 714 | - | - | |
Cma08g01245 | 1187 | ProSiteProfiles | PH domain profile. | 326 | 417 | IPR001849 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma08g01245 | Cma17g00346 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g01093 | Cma-Chr5:8617989 | Cma08g01245 | Cma-Chr8:7606619 | 0 | dispersed | |
Cma08g01245 | Cma-Chr8:7606619 | Cma03g00651 | Cma-Chr3:5505034 | 2.12E-18 | dispersed | |
Cma17g00346 | Cma-Chr17:1870475 | Cma08g01245 | Cma-Chr8:7606619 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g01245 | K01115 | - | csv:101211856 | 2140.15 |