Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01254 ATGGATCTAAGCCACATGAAGGGATCGATGCCGACGCCGACTTCAATGGTTTCTGATCAGTTCCCGGCGGGTCTTCGCGTCCTGGTTGTGGATGATGATCCTACCTGTCTCAGGATCTTGGAAAAGATGCTTCAGAATTGCTGCTATGCTGTGACGAAATGTAATCGGGCTGAGATCGCATTATCCATGCTTCGTGAGAACAAAAACGGGTTTGATATTGTGTTAAGTGACGTGCATATGCCAGACATGAATGGATTCAAACTTCTAGAGCAAGTTGGGTTGGAGATGGATTTGCCCGTTATCATGATGTCAGCAGATGATGGGAAGAATGTTGTGATGAAGGGAGTGATTCATGGTGCTTGTGATTACCTGATCAAACCCGTTCGAATTGAAGCGCTTAGGAACATATGGCAACATGTAGTTCGGAAGCGAAAGACTGAATGGAAGGATTTAGAGCAATCTGGGAGCGTGGATGATGGCGATCGAGAGAAAAATCCATCTGAAGGTGCTAACTATTCATCTTCAGTATATGAAGGAAGTTGGAACAGCTCGAAGAGGAGGAGGGATACAGAAGAAGAGGCCGAGGAGAGGGACGATACGTCGACTTTAAAGAAGCCTAGGGTGGTATGGTCGGTTGAGCTCCATCAACAGTTTGTCGCCGCAGTTAAACAGCTAGGCATCGACAAGGCTGTTCCTAAAAAGATATTGGAGTTGATGAACGTTCCGGGGCTTACTCGAGAAAATGTTGCCAGTCACCTCCAGAAATATCGGTTATATCTTAGAAGGCTTAGTGGAGTATCATCGTCACACTCACTCCAATGTAATTTGAACAATTCTTTTATGAACCCCCAAGATCCGCCTTTTGGGCCAATGGCTTCATTCAATGGAATTGATCTTCAGACACTTTCGGTCACTGGCCATCTCTCGCCTCAAAGCCTTGCTGCACTCCAAGCAACCGAATTTCGAAGGCCTGCTGCAGCGAAATCTAGCATGTCGATGGCCCTTGTTGATCAGAACAACCTATTCAGCTTTAAAAATCCAAAATTGAGGTTTGTTGAGGACCAAACGCCACACCTAAGCAACCGTAAACCAATAAACTTGTTTCATGGGATTCCAACAAAAATGGAGCCAAAGCAGCCTGCCATTATGCACCCTTCTGTGCAGACTCAAGGGAACATAAACATGCCACTCAATATCAAGACAGAACATGGTGCAACTCAACTAATGCATCATTTGTCCCATCAGCAAACTGGAGGACAGGCTGTAAGTAACTCTCCTGCTAGCCACTTACCCAGAATTTCATCGTCTTTTCCGATCATATCAGGTAGCATTACGAGTCGAAATGGGACTGCTGATAGTACCCAAGGACCTGGATATAACCTAGTTTCGCCAGCATCCTTGATGATGAACTTTCCAATGAACCAACTCACAGAATTGTCAAACAATTTTTCTCTTCCGAGTGATTCGACCGTATCTACCCTAACCTGTAAAGGGGTGTTTCAAGAGGAAATTAGTTCAGATCTACATGGGTCGGACGGACTAATGTCGAGTTATGATGTTTTTAGTGACTTGCATCTGCAAAAATCCCATGACTGGGATTCTCACAATGTAGGCAGCTTGGCCTTTGGTACTTCTCACCATGGGAACTTCATACAGGATAGCTTTGATGTCTCACCTTCAACTTTGATTCATCATGGTTTTCCTTCAAGCCAAACAAATGGACAAAATCATAATTCATCCTCTGCTGGAAAGACTATCTTTCCCTTTTCGGATGCAACTCAACCCGAGAATGCGCAGAGTAATGCTGAGAAGTTGCCTCTCGATCCCGGGGACGTTAAACCTCAGAGAATCCCTGATGCAAGCTATCAAACAGACCTCTTATCTGAGAATTTTGGCCAGGATGAACTTCTCAGTGTCTTCCTCAAACAAGAACAACAAGGAGACAACGGATCGCTCCAAATACACTTTGTTGTTGTAACTCTTAAGATCAAAGTTCTCCCGTATTAG 2007 44.64 MDLSHMKGSMPTPTSMVSDQFPAGLRVLVVDDDPTCLRILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMNGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVDDGDREKNPSEGANYSSSVYEGSWNSSKRRRDTEEEAEERDDTSTLKKPRVVWSVELHQQFVAAVKQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSSSHSLQCNLNNSFMNPQDPPFGPMASFNGIDLQTLSVTGHLSPQSLAALQATEFRRPAAAKSSMSMALVDQNNLFSFKNPKLRFVEDQTPHLSNRKPINLFHGIPTKMEPKQPAIMHPSVQTQGNINMPLNIKTEHGATQLMHHLSHQQTGGQAVSNSPASHLPRISSSFPIISGSITSRNGTADSTQGPGYNLVSPASLMMNFPMNQLTELSNNFSLPSDSTVSTLTCKGVFQEEISSDLHGSDGLMSSYDVFSDLHLQKSHDWDSHNVGSLAFGTSHHGNFIQDSFDVSPSTLIHHGFPSSQTNGQNHNSSSAGKTIFPFSDATQPENAQSNAEKLPLDPGDVKPQRIPDASYQTDLLSENFGQDELLSVFLKQEQQGDNGSLQIHFVVVTLKIKVLPY 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7655266 7658481 + CmaCh08G012540.1 Cma08g01254 299949

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01254 668 CDD REC_typeB_ARR-like 27 141 - -
Cma08g01254 668 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Cma08g01254 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 638 - -
Cma08g01254 668 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 261 IPR017930 -
Cma08g01254 668 SUPERFAMILY CheY-like 24 148 IPR011006 -
Cma08g01254 668 Gene3D - 25 157 - -
Cma08g01254 668 Pfam Response regulator receiver domain 27 135 IPR001789 GO:0000160
Cma08g01254 668 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Cma08g01254 668 MobiDBLite consensus disorder prediction 565 601 - -
Cma08g01254 668 MobiDBLite consensus disorder prediction 167 181 - -
Cma08g01254 668 Pfam Myb-like DNA-binding domain 207 257 IPR001005 -
Cma08g01254 668 MobiDBLite consensus disorder prediction 148 202 - -
Cma08g01254 668 MobiDBLite consensus disorder prediction 182 202 - -
Cma08g01254 668 SMART REC_2 25 137 IPR001789 GO:0000160
Cma08g01254 668 Gene3D - 202 264 - -
Cma08g01254 668 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Cma08g01254 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 638 IPR045279 GO:0009736
Cma08g01254 668 MobiDBLite consensus disorder prediction 565 617 - -
Cma08g01254 668 MobiDBLite consensus disorder prediction 148 166 - -
Cma08g01254 668 PIRSF RR_ARR_type-B 4 655 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01254 - - K14491 csv:101210138 1053.89
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma06g01548 Cma08g01254 CCT
Cma06g01548 Cma08g01254 ECH
Cma08g01254 Cma17g00351 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01254 Cma-Chr8:7655266 Cma09g00420 Cma-Chr9:1816748 5.50E-102 dispersed
Cma16g00149 Cma-Chr16:660996 Cma08g01254 Cma-Chr8:7655266 5.56E-54 dispersed
Cma14g01602 Cma-Chr14:12043159 Cma08g01254 Cma-Chr8:7655266 0 wgd
Cma17g00351 Cma-Chr17:1926092 Cma08g01254 Cma-Chr8:7655266 0 wgd
Cma06g01548 Cma-Chr6:9701157 Cma08g01254 Cma-Chr8:7655266 0 wgd
Cma08g00447 Cma-Chr8:2518826 Cma08g01254 Cma-Chr8:7655266 7.18E-13 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g113 Blo01g00060 . Bda03g01158 Bda08g00304 Bpe04g01103 . Bma04g01144 Bma05g01022 Cmo08g01225 Cmo17g00339 Cma06g01548 . Car06g01314 Car14g01419 Sed02g1152 Cpe08g00165 Cpe03g01344 Bhi01g01057 Tan10g1051 Cmetu11g1360 Lac11g0905 Hepe05g1404 . Lcy11g1369 Cla06g00448 Cam06g0476 Cec06g0481 Cco06g0479 Clacu06g0463 Cmu06g0463 Cre06g1238 Cone14ag0738 Cone15ag0748 Cone7ag0120 Cone4ag0123 . Csa06g01765 Chy11g01546 . . Blo07g00160 . . Bpe05g00823 Bpe13g00682 . Bma06g01483 . . Cmo14g01636 Cma08g01254 Cma17g00351 Car08g01126 Car17g00322 Cpe12g00300 Cpe17g00047 Bhi12g01899 . . . . . Lcy12g0777 Cla05g00679 Cam05g0746 Cec05g0752 Cco05g0752 Clacu05g0738 Cmu05g0703 Cre05g0777 Lsi09g01466 Csa03g01497 Chy06g00735 Cme11g02055
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma12g00050 . 52 256 Response Regulator Gene Family AT3G16857 51.3 6.3e-52 203.0
Cma05g00062 . 310 514 Response Regulator Gene Family AT3G16857 51.3 8.3e-52 202.6
Cma11g00478 CST 18 380 Response Regulator Gene Family AT4G31920 53.8 1.7e-85 314.3
Cma10g00483 . 18 355 Response Regulator Gene Family AT4G31920 55.6 2.0e-81 300.8
Cma08g01254 CCT,CST,ECH 17 281 Response Regulator Gene Family AT4G31920 53.6 1.9e-71 267.7
Cma17g00351 CCT,CST,ECH 27 272 Response Regulator Gene Family AT4G31920 56.5 2.1e-70 264.2
Cma06g01548 CCT,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 8.6e-69 258.8
Cma14g01602 CST 425 699 Response Regulator Gene Family AT4G31920 50.4 1.5e-65 248.1
Cma05g00062 . 269 517 Response Regulator Gene Family AT4G31920 52.4 2.9e-64 243.8
Cma12g00050 . 11 259 Response Regulator Gene Family AT4G31920 50.4 3.0e-61 233.8
Cma06g01548 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cma09g00420 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.4e-39 159.8
Cma01g01650 . 93 255 Response Regulator Gene Family AT1G67710 52.4 7.1e-37 152.5
Cma11g00478 CST 16 384 Response Regulator Gene Family AT2G25180 54.1 4.0e-96 349.7
Cma10g00483 . 16 364 Response Regulator Gene Family AT2G25180 53.7 3.5e-84 310.1
Cma08g01254 CCT,CST,ECH 19 281 Response Regulator Gene Family AT2G25180 56.7 3.0e-75 280.4
Cma12g00050 . 11 256 Response Regulator Gene Family AT2G25180 55.2 1.9e-69 261.2
Cma05g00062 . 269 514 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cma06g01548 CCT,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 5.0e-53 205.7
Cma05g00062 . 330 517 Response Regulator Gene Family AT2G01760 51.0 5.3e-47 185.7
Cma11g00478 CST 79 276 Response Regulator Gene Family AT2G01760 53.6 1.2e-43 174.5
Cma01g01650 . 73 261 Response Regulator Gene Family AT2G01760 51.9 2.1e-43 173.7
Cma10g00483 . 79 276 Response Regulator Gene Family AT2G01760 54.6 6.1e-43 172.2
Cma01g01650 . 8 360 Response Regulator Gene Family AT5G58080 50.3 4.5e-77 286.6
Cma17g00351 CCT,CST,ECH 21 271 Response Regulator Gene Family AT5G58080 55.6 9.3e-67 252.3
Cma05g00062 . 267 516 Response Regulator Gene Family AT5G58080 51.4 3.1e-62 237.3
Cma12g00050 . 9 258 Response Regulator Gene Family AT5G58080 50.2 5.8e-61 233.0
Cma08g01254 CCT,CST,ECH 18 243 Response Regulator Gene Family AT4G16110 66.2 1.9e-78 291.2
Cma17g00351 CCT,CST,ECH 27 251 Response Regulator Gene Family AT4G16110 66.5 2.5e-78 290.8
Cma06g01548 CCT,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.7e-77 287.3
Cma14g01602 CST 421 670 Response Regulator Gene Family AT4G16110 60.3 2.2e-74 277.7
Cma09g00420 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cma01g01650 . 11 233 Response Regulator Gene Family AT4G16110 56.4 4.4e-59 226.9
Cma12g00050 . 10 235 Response Regulator Gene Family AT4G16110 54.5 9.7e-59 225.7
Cma05g00062 . 268 493 Response Regulator Gene Family AT4G16110 53.6 6.3e-58 223.0
Cma10g00483 . 10 249 Response Regulator Gene Family AT4G16110 55.2 1.1e-57 222.2
Cma11g00478 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 4.1e-57 220.3
Cma10g00154 . 27 192 Response Regulator Gene Family AT3G48100 64.7 2.2e-53 206.1
Cma04g00304 . 29 162 Response Regulator Gene Family AT3G48100 73.1 1.2e-51 200.3
Cma04g01600 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.3e-50 196.8
Cma15g00834 . 11 151 Response Regulator Gene Family AT3G48100 59.6 4.4e-41 165.2
Cma03g00130 CST 10 156 Response Regulator Gene Family AT3G48100 57.1 1.7e-40 163.3
Cma14g00515 . 3 154 Response Regulator Gene Family AT3G48100 53.9 4.8e-40 161.8
Cma04g02197 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.8e-40 161.8
Cma07g01364 CST 10 169 Response Regulator Gene Family AT3G48100 52.5 3.1e-39 159.1
Cma04g02368 . 19 176 Response Regulator Gene Family AT3G48100 52.2 1.1e-36 150.6
Cma04g01600 . 1 175 Response Regulator Gene Family AT1G59940 66.5 8.1e-59 224.9
Cma04g00304 . 1 166 Response Regulator Gene Family AT1G59940 65.9 7.1e-55 211.8
Cma10g00154 . 12 188 Response Regulator Gene Family AT1G59940 57.5 3.4e-49 193.0
Cma15g00834 . 5 152 Response Regulator Gene Family AT1G59940 58.1 3.8e-40 162.9
Cma04g02197 . 9 157 Response Regulator Gene Family AT1G59940 58.4 3.8e-40 162.9
Cma14g00515 . 8 152 Response Regulator Gene Family AT1G59940 57.2 6.5e-40 162.2
Cma03g00130 CST 17 154 Response Regulator Gene Family AT1G59940 58.0 6.0e-38 155.6
Cma04g01330 . 9 175 Response Regulator Gene Family AT1G59940 54.5 1.0e-37 154.8
Cma07g01364 CST 11 167 Response Regulator Gene Family AT1G59940 51.0 1.8e-37 154.1
Cma04g02368 . 19 162 Response Regulator Gene Family AT1G59940 57.2 8.7e-37 151.8
Cma04g01600 . 16 226 Response Regulator Gene Family AT1G10470 57.0 3.7e-56 215.7
Cma04g00304 . 23 187 Response Regulator Gene Family AT1G10470 68.5 3.0e-53 206.1
Cma10g00154 . 30 174 Response Regulator Gene Family AT1G10470 64.8 2.1e-46 183.3
Cma14g00515 . 10 152 Response Regulator Gene Family AT1G10470 58.0 1.4e-39 160.6
Cma04g02197 . 15 162 Response Regulator Gene Family AT1G10470 56.8 4.1e-39 159.1
Cma15g00834 . 11 157 Response Regulator Gene Family AT1G10470 57.1 5.4e-39 158.7
Cma03g00130 CST 17 154 Response Regulator Gene Family AT1G10470 60.1 2.7e-38 156.4
Cma07g01364 CST 17 167 Response Regulator Gene Family AT1G10470 55.0 1.7e-37 153.7
Cma04g01330 . 11 182 Response Regulator Gene Family AT1G10470 52.9 1.1e-36 151.0
Cma10g00154 . 27 192 Response Regulator Gene Family AT3G48100 64.7 2.2e-53 206.1
Cma04g00304 . 29 162 Response Regulator Gene Family AT3G48100 73.1 1.2e-51 200.3
Cma04g01600 . 29 162 Response Regulator Gene Family AT3G48100 72.4 1.3e-50 196.8
Cma15g00834 . 11 151 Response Regulator Gene Family AT3G48100 59.6 4.4e-41 165.2
Cma03g00130 CST 10 156 Response Regulator Gene Family AT3G48100 57.1 1.7e-40 163.3
Cma14g00515 . 3 154 Response Regulator Gene Family AT3G48100 53.9 4.8e-40 161.8
Cma04g02197 . 15 156 Response Regulator Gene Family AT3G48100 59.2 4.8e-40 161.8
Cma07g01364 CST 10 169 Response Regulator Gene Family AT3G48100 52.5 3.1e-39 159.1
Cma04g02368 . 19 176 Response Regulator Gene Family AT3G48100 52.2 1.1e-36 150.6
Cma04g00304 . 11 158 Response Regulator Gene Family AT5G62920 67.6 8.8e-50 194.1
Cma10g00154 . 36 169 Response Regulator Gene Family AT5G62920 73.9 2.6e-49 192.6
Cma04g01600 . 25 168 Response Regulator Gene Family AT5G62920 68.8 7.5e-49 191.0
Cma15g00834 . 11 151 Response Regulator Gene Family AT5G62920 59.6 2.2e-40 162.9
Cma04g02197 . 15 156 Response Regulator Gene Family AT5G62920 59.2 3.7e-40 162.2
Cma03g00130 CST 12 156 Response Regulator Gene Family AT5G62920 57.2 1.8e-39 159.8
Cma14g00515 . 10 154 Response Regulator Gene Family AT5G62920 55.9 3.2e-39 159.1
Cma07g01364 CST 12 169 Response Regulator Gene Family AT5G62920 52.5 7.0e-39 157.9
Cma10g00154 . 43 191 Response Regulator Gene Family AT1G19050 68.9 1.2e-50 197.2
Cma04g01600 . 15 185 Response Regulator Gene Family AT1G19050 57.0 2.5e-45 179.5
Cma04g00304 . 28 186 Response Regulator Gene Family AT1G19050 60.6 7.3e-45 177.9
Cma15g00834 . 3 154 Response Regulator Gene Family AT1G19050 52.0 4.6e-39 158.7
Cma04g02197 . 9 159 Response Regulator Gene Family AT1G19050 53.0 1.3e-38 157.1
Cma14g00515 . 8 154 Response Regulator Gene Family AT1G19050 54.4 2.3e-38 156.4
Cma03g00130 CST 11 156 Response Regulator Gene Family AT1G19050 55.5 2.3e-38 156.4
Cma07g01364 CST 11 169 Response Regulator Gene Family AT1G19050 50.3 1.1e-37 154.1
Cma03g00130 CST 8 265 Response Regulator Gene Family AT2G41310 52.7 8.7e-60 227.6
Cma14g00515 . 1 156 Response Regulator Gene Family AT2G41310 73.1 6.9e-57 218.0
Cma07g01364 CST 8 171 Response Regulator Gene Family AT2G41310 66.9 9.3e-54 207.6
Cma15g00834 . 8 153 Response Regulator Gene Family AT2G41310 66.4 3.1e-49 192.6
Cma04g02197 . 12 158 Response Regulator Gene Family AT2G41310 66.7 2.0e-48 189.9
Cma04g02368 . 11 161 Response Regulator Gene Family AT2G41310 58.8 3.7e-42 169.1
Cma04g00304 . 25 158 Response Regulator Gene Family AT2G41310 58.9 3.7e-42 169.1
Cma04g01600 . 25 158 Response Regulator Gene Family AT2G41310 59.6 3.1e-41 166.0
Cma15g00671 . 29 170 Response Regulator Gene Family AT2G41310 60.4 2.9e-39 159.5
Cma10g00154 . 42 172 Response Regulator Gene Family AT2G41310 59.0 3.8e-39 159.1
Cma03g00130 CST 8 265 Response Regulator Gene Family AT3G57040 53.1 1.0e-63 240.7
Cma14g00515 . 1 158 Response Regulator Gene Family AT3G57040 75.9 4.1e-60 228.8
Cma15g00834 . 1 153 Response Regulator Gene Family AT3G57040 69.9 1.6e-51 200.3
Cma04g02197 . 12 158 Response Regulator Gene Family AT3G57040 68.0 2.2e-50 196.4
Cma04g01330 . 4 184 Response Regulator Gene Family AT3G57040 59.6 3.6e-48 189.1
Cma04g02368 . 15 187 Response Regulator Gene Family AT3G57040 54.6 5.3e-44 175.3
Cma04g00304 . 25 158 Response Regulator Gene Family AT3G57040 60.1 7.0e-44 174.9
Cma04g01600 . 25 158 Response Regulator Gene Family AT3G57040 59.4 1.7e-42 170.2
Cma10g00154 . 42 172 Response Regulator Gene Family AT3G57040 59.6 6.1e-40 161.8
Cma15g00671 . 29 170 Response Regulator Gene Family AT3G57040 60.4 8.0e-40 161.4
Cma04g00100 . 14 144 Response Regulator Gene Family AT3G57040 55.1 1.8e-36 150.2
Cma10g00154 . 43 191 Response Regulator Gene Family AT1G74890 71.1 1.4e-51 200.3
Cma04g00304 . 25 188 Response Regulator Gene Family AT1G74890 60.8 2.7e-47 186.0
Cma04g01600 . 25 187 Response Regulator Gene Family AT1G74890 61.8 2.7e-47 186.0
Cma15g00834 . 7 146 Response Regulator Gene Family AT1G74890 58.6 1.4e-40 163.7
Cma14g00515 . 8 152 Response Regulator Gene Family AT1G74890 55.9 6.0e-39 158.3
Cma03g00130 CST 12 149 Response Regulator Gene Family AT1G74890 58.7 1.7e-38 156.8
Cma04g02197 . 15 151 Response Regulator Gene Family AT1G74890 58.4 2.3e-38 156.4
Cma07g01364 CST 12 162 Response Regulator Gene Family AT1G74890 55.0 3.0e-38 156.0
Cma04g01330 . 5 166 Response Regulator Gene Family AT1G74890 53.7 7.3e-37 151.4
Cma04g00100 . 16 145 Response Regulator Gene Family AT2G40670 66.4 6.0e-42 167.9
Cma04g00304 . 26 159 Response Regulator Gene Family AT2G40670 56.2 3.3e-40 162.2
Cma14g00515 . 6 154 Response Regulator Gene Family AT2G40670 56.0 4.3e-40 161.8
Cma04g01600 . 26 159 Response Regulator Gene Family AT2G40670 55.5 3.7e-39 158.7
Cma03g00130 CST 13 156 Response Regulator Gene Family AT2G40670 52.4 1.3e-36 150.2
Cma04g00100 . 16 145 Response Regulator Gene Family AT3G56380 67.9 3.0e-43 172.2
Cma04g00304 . 26 159 Response Regulator Gene Family AT3G56380 55.6 6.2e-41 164.5
Cma04g01600 . 26 159 Response Regulator Gene Family AT3G56380 54.8 4.0e-40 161.8
Cma14g00515 . 6 154 Response Regulator Gene Family AT3G56380 54.0 4.5e-39 158.3
Cma10g00154 . 32 172 Response Regulator Gene Family AT3G56380 58.3 3.8e-38 155.2
Cma04g02197 . 15 159 Response Regulator Gene Family AT3G56380 54.1 9.3e-37 150.6
Cma12g00050 . 52 256 Response Regulator Gene Family AT3G16857 51.3 6.3e-52 203.0
Cma05g00062 . 310 514 Response Regulator Gene Family AT3G16857 51.3 8.3e-52 202.6
Cma08g01254 CCT,CST,ECH 18 243 Response Regulator Gene Family AT4G16110 66.2 1.9e-78 291.2
Cma17g00351 CCT,CST,ECH 27 251 Response Regulator Gene Family AT4G16110 66.5 2.5e-78 290.8
Cma06g01548 CCT,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.7e-77 287.3
Cma14g01602 CST 421 670 Response Regulator Gene Family AT4G16110 60.3 2.2e-74 277.7
Cma09g00420 . 11 234 Response Regulator Gene Family AT4G16110 59.5 2.1e-61 234.6
Cma01g01650 . 11 233 Response Regulator Gene Family AT4G16110 56.4 4.4e-59 226.9
Cma12g00050 . 10 235 Response Regulator Gene Family AT4G16110 54.5 9.7e-59 225.7
Cma05g00062 . 268 493 Response Regulator Gene Family AT4G16110 53.6 6.3e-58 223.0
Cma10g00483 . 10 249 Response Regulator Gene Family AT4G16110 55.2 1.1e-57 222.2
Cma11g00478 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 4.1e-57 220.3
Cma11g00478 CST 18 380 Response Regulator Gene Family AT4G31920 53.8 1.7e-85 314.3
Cma10g00483 . 18 355 Response Regulator Gene Family AT4G31920 55.6 2.0e-81 300.8
Cma08g01254 CCT,CST,ECH 17 281 Response Regulator Gene Family AT4G31920 53.6 1.9e-71 267.7
Cma17g00351 CCT,CST,ECH 27 272 Response Regulator Gene Family AT4G31920 56.5 2.1e-70 264.2
Cma06g01548 CCT,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 8.6e-69 258.8
Cma14g01602 CST 425 699 Response Regulator Gene Family AT4G31920 50.4 1.5e-65 248.1
Cma05g00062 . 269 517 Response Regulator Gene Family AT4G31920 52.4 2.9e-64 243.8
Cma12g00050 . 11 259 Response Regulator Gene Family AT4G31920 50.4 3.0e-61 233.8
Cma06g01548 CCT,ECH 99 261 Response Regulator Gene Family AT1G67710 53.3 2.0e-39 161.0
Cma09g00420 . 93 256 Response Regulator Gene Family AT1G67710 52.9 4.4e-39 159.8
Cma01g01650 . 93 255 Response Regulator Gene Family AT1G67710 52.4 7.1e-37 152.5
Cma11g00478 CST 16 384 Response Regulator Gene Family AT2G25180 54.1 4.0e-96 349.7
Cma10g00483 . 16 364 Response Regulator Gene Family AT2G25180 53.7 3.5e-84 310.1
Cma08g01254 CCT,CST,ECH 19 281 Response Regulator Gene Family AT2G25180 56.7 3.0e-75 280.4
Cma12g00050 . 11 256 Response Regulator Gene Family AT2G25180 55.2 1.9e-69 261.2
Cma05g00062 . 269 514 Response Regulator Gene Family AT2G25180 54.8 3.0e-67 253.8
Cma06g01548 CCT,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 5.0e-53 205.7
Cma05g00062 . 330 517 Response Regulator Gene Family AT2G01760 51.0 5.3e-47 185.7
Cma11g00478 CST 79 276 Response Regulator Gene Family AT2G01760 53.6 1.2e-43 174.5
Cma01g01650 . 73 261 Response Regulator Gene Family AT2G01760 51.9 2.1e-43 173.7
Cma10g00483 . 79 276 Response Regulator Gene Family AT2G01760 54.6 6.1e-43 172.2
Cma01g01650 . 8 360 Response Regulator Gene Family AT5G58080 50.3 4.5e-77 286.6
Cma17g00351 CCT,CST,ECH 21 271 Response Regulator Gene Family AT5G58080 55.6 9.3e-67 252.3
Cma05g00062 . 267 516 Response Regulator Gene Family AT5G58080 51.4 3.1e-62 237.3
Cma12g00050 . 9 258 Response Regulator Gene Family AT5G58080 50.2 5.8e-61 233.0
Cma01g00801 . 6 552 Response Regulator Gene Family AT5G61380 50.7 8.6e-142 501.5
Cma13g01146 . 425 948 Response Regulator Gene Family AT5G61380 51.4 1.4e-139 494.2
Cma07g00944 . 40 216 Response Regulator Gene Family AT5G60100 70.2 6.4e-61 232.3
Cma03g00464 . 38 205 Response Regulator Gene Family AT5G60100 67.3 8.4e-53 205.3
Cma15g00995 . 374 515 Response Regulator Gene Family AT5G60100 57.7 1.0e-42 171.8
Cma14g02156 . 105 239 Response Regulator Gene Family AT5G60100 61.5 9.6e-41 165.2
Cma03g00464 . 77 205 Response Regulator Gene Family AT5G24470 58.1 4.0e-37 153.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001295 2 3 2 2 2 2 4 2 2 2 2 2 4 2 2 4 2 4 4 2 2 2 2 2 2 2 2 7 3 1 76
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35566 PF00072 Response_reg 1.10E-21 CL0304 Cma TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma08g01254 Cma_Chr08 FPKM 44.489784 43.773258 16.354404 15.712159 8.345705 7.41477 6.682273 25.891592 23.736839 22.524826