Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01274 ATGGCATTTTGGTGGACTGTGTTTGTTCTAGGATTTGCTTACGCCATCTGTAGGTTTCTCGTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTGTGGACGACGGGAATCAGGCGCCGGAGAATAGCTACATCTATATTCCACCTAGAGTAAAGACACAACAGCAAGACAAGAAGGTCCAATGTTACGAGCCTGCAAATATGAAATACTTGGGATTCGTTCCTGCATTGACACGAGACGAGGTCAAGGAGCGTGTTGCTTCAGCCAGAAAAGCACAGAACGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATAATTTTGAAGTATATAGTTGAACACCAAAAGCTAATTTGCGAGATCTCCTCCCGTGACACTGGGAAAACGATAGTGGATGCTAGTATAGGAGAAGTTATGGCGATATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGGAGGGCAACACTTCACAAAAAAGCACGAGTGGAATTTCATCCCCTTGGAGTCATTGGGGCAATAGTTCCATGGAACTATCCATTCCATAACATTTGCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGATTTCAGAACATGCAAGTTGGTCCGGATGCTTCTACATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTCGATGTGATAACAGGGTTTTCTGAAACAGGTGAAGCGCTAATAATGAAAACTGCTGCCAAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGGAAGGACGCTTTTATTGTCTGTGAGGATGTAGATTTGGATCACGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTAATGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAGAGCCTTGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGCGCCGTCGATCAATATTTCCCACCTACCGTTATCGTTGATGCATTTGGACCAATCCTGCCTATAATGAAATTCAGCACAGATGATGCGGTCGTGAAGCTTGCAAATGATTCAAAATTTGGGCTTGGTTGTGGTGTGTTTTCTGGCAGTCAGCAGCGTGCCAGGACCATCGCTTTGCAGATACGTTGTGGAAGTGTTGCAATTAACGACTTCGCCACAAATTATTTTTGTCAGTCCTTGCCATTTGGTGGTGTGAAAGAGAGTGGATTCGGTCGATTTTCGGGCGTTGAAGGATTACGAGCTTGTTGTATCGTCAAAGCAGTGGTCGAGGACAGGTGGTGGCCGTACATTCAAACTAAGTATCCCAAGCCTCTTACGTATCCTGTTGCAGACAACGCTTTTGAGTTTCAGATGTCAGTTGTTGAAGCAACGTACGGCCTGAACATATGGGATCGACTAAGAGCATTGATCAATGTTGTGAAGATGCTGTCCCAGGAGAACACTTCGGCTAAACATAACTCTGTCATTGGCGATGGAGATAAGAAAGCTGATTGA 1725 44.75 MAFWWTVFVLGFAYAICRFLVMLIPPNVPSIEVDASDVVDDGNQAPENSYIYIPPRVKTQQQDKKVQCYEPANMKYLGFVPALTRDEVKERVASARKAQNEWAKSSFKQRRLLLRIILKYIVEHQKLICEISSRDTGKTIVDASIGEVMAICEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNICNPVLAAVFAGNGIVVKISEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFSETGEALIMKTAAKTLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCNGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDAFGPILPIMKFSTDDAVVKLANDSKFGLGCGVFSGSQQRARTIALQIRCGSVAINDFATNYFCQSLPFGGVKESGFGRFSGVEGLRACCIVKAVVEDRWWPYIQTKYPKPLTYPVADNAFEFQMSVVEATYGLNIWDRLRALINVVKMLSQENTSAKHNSVIGDGDKKAD 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7737287 7747448 - CmaCh08G012740.1 Cma08g01274 299969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01274 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 283 503 IPR016163 GO:0016620
Cma08g01274 574 Pfam Aldehyde dehydrogenase family 264 498 IPR015590 GO:0016491
Cma08g01274 574 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 282 IPR016162 GO:0016491
Cma08g01274 574 SUPERFAMILY ALDH-like 56 503 IPR016161 GO:0016491
Cma08g01274 574 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 279 286 IPR029510 GO:0016491
Cma08g01274 574 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 533 - -
Cma08g01274 574 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 533 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g01274 Cma17g00366 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01274 Cma-Chr8:7737287 Cma10g00604 Cma-Chr10:2795115 3.27E-52 dispersed
Cma17g00366 Cma-Chr17:2030351 Cma08g01274 Cma-Chr8:7737287 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01274 - - csv:101209796 1005.74