Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma08g01288 | ATGGCCAACTATCTCGCCTTCCATCTTTGTCTAATAATGTTCGAGCTTATAGCAGTCACTTCGGCGAACATGAAAGCATCATACGGAGGAGGGGATGAGAACCAGATGCCCTTCGGCATGCCCCCTTTCTGCCCCGAGGCAGAATCCATCATCTTCTATTGGGTCAAAACTGCCATTACGGAGGACCCTCGAATGGCAGCATCTCTGCTTCGACTCCATTTCCATGACTGCTTTGTCAATGGGTGCGATGCTTCAGTGTTGTTGGACGATAACGACAACTTTGTCGGAGAGAAAACTGCAGCTCCAAATGCAAACTCGCTGAGAGGATTTGAAGTGATTGATGCCATAAAATCTGAGATCGAATCTGTTTGTCCACAGACAGTTTCATGTGCTGACATTCTTGCAATTGCGGCCCGAGACTCTGTCGTTCTTTCTGGAGGACCTGTGTGGAAAGTGGAATTTGGAAGAGGAGACAGCCTGAGCGCCAGCAAAACAGCAGCACAAAACAACATTCCTGCGCCTAACTCCACTGTGGCCACTCTAGTTTCAAAGTTCCAGAACCTTGGCCTTTCTCTCAGAGATATGGTTGCTCTCTCAGGGGCGCACACGCTGGGACGAGCACGATGTGTTTCATTCAGTTCTAGGCTGCAGAATAACGGGAACAGCCCTAATGAAGGAGCAAACCAAGAGTTCATCGAGTCACTAAAACAGCTCTGCTCAGAATCTGGTAACAGCTCGACACTGGCACATCTCGACCTTGTAACCCCAGTGACGTTCGACAACCAGTATTACATCAATCTTCTCACCGGAGAAGGGTTGCTCCAGTCTGATCAAGTTCTTGTAACTAGTGATTACCAAACTAGAGAAATAGTAGAAACCTATGCTGTGGACCCGATTGCTTTCTTTGAAGACTTCAAGCAGTCAATGGTGAAAATGGGATCCCTCAAACCACCCGTTGGAACACAGACCGTGATCCGAACTAACTGTCGTACTCCGAGCTAA | 1002 | 48.1 | MANYLAFHLCLIMFELIAVTSANMKASYGGGDENQMPFGMPPFCPEAESIIFYWVKTAITEDPRMAASLLRLHFHDCFVNGCDASVLLDDNDNFVGEKTAAPNANSLRGFEVIDAIKSEIESVCPQTVSCADILAIAARDSVVLSGGPVWKVEFGRGDSLSASKTAAQNNIPAPNSTVATLVSKFQNLGLSLRDMVALSGAHTLGRARCVSFSSRLQNNGNSPNEGANQEFIESLKQLCSESGNSSTLAHLDLVTPVTFDNQYYINLLTGEGLLQSDQVLVTSDYQTREIVETYAVDPIAFFEDFKQSMVKMGSLKPPVGTQTVIRTNCRTPS | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7797609 | 7799237 | - | CmaCh08G012880.1 | Cma08g01288 | 299983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma08g01288 | 333 | Pfam | Peroxidase | 55 | 296 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 194 | 204 | IPR019793 | - | |
Cma08g01288 | 333 | Gene3D | - | 44 | 330 | - | - | |
Cma08g01288 | 333 | PANTHER | PEROXIDASE 40 | 40 | 330 | - | - | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 44 | 63 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 68 | 88 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 108 | 121 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 127 | 137 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 146 | 161 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 193 | 205 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 250 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 266 | 283 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Plant peroxidase signature | 307 | 320 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | SUPERFAMILY | Heme-dependent peroxidases | 43 | 331 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | ProSiteProfiles | Plant heme peroxidase family profile. | 44 | 333 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Haem peroxidase superfamily signature | 66 | 80 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Haem peroxidase superfamily signature | 128 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Haem peroxidase superfamily signature | 146 | 158 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Haem peroxidase superfamily signature | 194 | 209 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | PRINTS | Haem peroxidase superfamily signature | 252 | 267 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | Gene3D | Peroxidase, domain 2 | 172 | 313 | - | - | |
Cma08g01288 | 333 | PANTHER | PEROXIDASE 72-RELATED | 40 | 330 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma08g01288 | 333 | CDD | secretory_peroxidase | 44 | 330 | IPR033905 | GO:0004601|GO:0042744 | |
Cma08g01288 | 333 | ProSitePatterns | Peroxidases active site signature. | 66 | 77 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00767 | Cma-Chr4:3896086 | Cma08g01288 | Cma-Chr8:7797609 | 7.88E-110 | dispersed | |
Cma08g01288 | Cma-Chr8:7797609 | Cma20g00313 | Cma-Chr20:1550512 | 3.20E-97 | dispersed | |
Cma19g00444 | Cma-Chr19:5397025 | Cma08g01288 | Cma-Chr8:7797609 | 2.37E-44 | dispersed | |
Cma08g01288 | Cma-Chr8:7797609 | Cma16g00634 | Cma-Chr16:3271830 | 4.22E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma08g01288 | K00430 | - | csv:101205763 | 578.556 |