Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma08g01310 ATGAGAATGTGGGAGGCCTCACCCTGGTCCCTGCTGTGCGTTCTTACAGGGCTGTACGCGCTTGTGTTGGTTGCAAGAACACGAAGAAAACGAAAGGCGAGAGCATACAGGTTTCCTCCAGGGAGGAGAAGCTGGCCTCTAATAGGCGATAGCTTGAAGTGGTACAGTGCGGTGGCAAGCTCTCATCCGCCCAAGTATGTTGAAGAACAGGCCAAAAGGTACGGGAAGATCTTCTCGTGCCGTGTGTTCGGGAAATGGGCAGTGGTGTCGGTGGATCCCGTGTTTAACCGATACGTCATGCAAAACGAAGGCAAGTTGTTCAAATCCAGCTACCCGAAATCTTTCAGAGATTTGGTAGGGACCAACGGTGTGATCACAGCACAAGGGGAACAACAAAGGAAACTCCATGCAATTGCCTCCAATATGATGCGCCTACATGACCCCAAATTTCAGTTCCTGCGAGATATTCAAATCATAATCATTCAAACCTTGGGAAGTTTCCATAACGGCCAACTCATATGTCTCCAAGACGTTTGCAGGAAGATAGCTATTAATCTAATGGTAAGTCAGGTACTAGGAGTGTCAAGTGAATCAGAAGTGGAAGAAATTAGTGGGTTATTTTACGACTTCGTGGATGGCTGTTTGTCTATTCCTATCAACTTTCCTGGCTTTGCCTATTACAGGGCCATGAAGGCGAGGGAGCAAATCATAGGCAAAATTAAGAAGAAAATAGCGTGGCATAAGGCGAGGATGGCAGAGGGAAGGAGCGGGGAGGGAATGTTGGGAGGAGTATTGGAGGACCAGAAGTTGTCGGATGAGGCAGTTGCTGATTTCATTATCAATCTTCTTTTTGCTGGGAATGAAACCACATCTAAAACAATGCTTTTTGCAGTCTATTTCCTAACCCACTCACCCACAGCAATGAAGCAACTTGTGGATGAGCAAGAGGGTTTAACAAACAAGAATGGAGATCATACAATCACATGGCAGGATTACAAATCGATGCCCTTTACTCAATGTGTTATTGACGAGACACTTCGACTGGGAGGAATTGCAATATGGTTGATGAGGGAGGCAAAAGAAGAGATCAAGTATTCAGATTACGTTATTCCGAAAGGATGTTTCGTTGTTCCATTTCTTTCTGCTGTACATTTGGACGAGACTATATATGGAGAAGCTTCAACTTTCAACCCTTGGAGATGGATGGAGCTTAAGAATGAGGAAATGAGAAACTGGAGGAGTAGCCCATTCTTTGCTCCATTCGGGGGAGGTGCTAGATTATGTCCGGGAGCAGAATTGGCGCGCCTCCAAATTGCTCTATTTCTCCACCACTTTGTTACCAAGTATAGGTCTTCCACTTCCAGCTTCGTTTTCATTGTGAATTGCTCTCTGCGTTTTTCGCCATTCCTTCCCTTTCACTCTACCCACCTAACTCCCACTCCCACTCCCGCTAGGGTTCCTTCGGGTTTTTCCCTCTCCAAATGTTCCTTTACTTGGATTCCATGCTACGCGTAG 1515 46.07 MRMWEASPWSLLCVLTGLYALVLVARTRRKRKARAYRFPPGRRSWPLIGDSLKWYSAVASSHPPKYVEEQAKRYGKIFSCRVFGKWAVVSVDPVFNRYVMQNEGKLFKSSYPKSFRDLVGTNGVITAQGEQQRKLHAIASNMMRLHDPKFQFLRDIQIIIIQTLGSFHNGQLICLQDVCRKIAINLMVSQVLGVSSESEVEEISGLFYDFVDGCLSIPINFPGFAYYRAMKAREQIIGKIKKKIAWHKARMAEGRSGEGMLGGVLEDQKLSDEAVADFIINLLFAGNETTSKTMLFAVYFLTHSPTAMKQLVDEQEGLTNKNGDHTITWQDYKSMPFTQCVIDETLRLGGIAIWLMREAKEEIKYSDYVIPKGCFVVPFLSAVHLDETIYGEASTFNPWRWMELKNEEMRNWRSSPFFAPFGGGARLCPGAELARLQIALFLHHFVTKYRSSTSSFVFIVNCSLRFSPFLPFHSTHLTPTPTPARVPSGFSLSKCSFTWIPCYA 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7913743 7917158 - CmaCh08G013100.1 Cma08g01310 300005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma08g01310 504 SUPERFAMILY Cytochrome P450 34 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 Pfam Cytochrome P450 39 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 24 458 - -
Cma08g01310 504 PRINTS E-class P450 group IV signature 368 382 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 412 428 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 335 351 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 428 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 65 88 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma08g01310 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Cma08g01310 504 PANTHER CYTOCHROME P450 26 24 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01310 Cma-Chr8:7913743 Cma14g01267 Cma-Chr14:10046353 1.38E-85 dispersed
Cma08g01310 Cma-Chr8:7913743 Cma04g01122 Cma-Chr4:5801740 7.79E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma08g01310 - - mcha:111025171 687.567