Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g00069 | ATGGCGGTCTACGGCGGCGACGTTCCCCAAGTGGATCCGAGAAGCGGCTTCTGCAAATCCACGAAAATTTTCCACAGCAAACGCCGCCCAATCCCACTTCCCCCTAACCAATCCCTCGATGCGACGACGTTTATCTCATCCCGCCCCCACAACGGCAAAATCGCCCTCATCGACGCCACCACCGGCCAACACATCACCTATTCCCACCTCTGGGAGTCTGTCGACTCCGTAGCCTCCTCCCTTTCCGACATGGGCATCAGAAAAGGCCACGTCATCCTCCTCCTTTCCCCAAACTCCATTTTCTTCCCCATTATTTGCCTCGCCGTCATGTCCCTCGGCGCCGTCATAACCACCACAAATCCCCTCAACACCCCTCAAGAAATCGCCAAACAGATCGCCGATTCCAACCCCATCTTAGCCTTCACCACCCAACAACTAATCCCCAAAATCGCCAGTTCCAAATTGCCAGTCGTTCTGATCGACGGTGAAATTCAAATTAAAAAATTCTCAGTCAAAATCGTGTCGACGCTGAGCGAAATGATGAGGAAAAAATCCAGTGGAAGTCGAGTTAAGGAGCGTGTGGACCAAAACGACACAGCGACTCTGCTTTACTCCTCTGGAACGACAGGGGCCAGCAAGGGCGTAGTGTCGTCTCACAAGAATCTAATTGCGATGGTTCAAGTCGTTGTGACGAGGTTCAAATTGAGCGAAGGGGAAGGGACTTTTATTTGTACGGTTCCGATGTTCCATATTTACGGCCTTGTGGCTTTCGCTACGGGGCTGCTCTCTTCGGGATCGACAATCGTCGTGTTGTCGAAATTCGAGATTCATGAAATGTTGTCGGCGATTGAGAAGTACAGAGCCACGTATCTGCCTCTTGTGCCGCCGATACTGGTGGCGATGGTGAACGCTGCCGAGCAGATAAAGGGAAAGTACGATTTGGGGTCGTTACACACGGCGTTGTCCGGCGGAGCGCCGCTCGGGAAGGAGGTGATTGAGGGTTTCGTTGAGAAGTATCCAAATGTTTCCATTCTTCAGGGATATGGATTGACGGAGTCCACAGGAATTGGGGCGTCCACCGATTCTCTGGAGGAGAGCCGCCGGTACGGCACGGCGGGGCTTCTATCGCCGAGCACCGAGGCCAAGATTGTTGTCCCGGACACCGGCGAGGCTCTGCCTGTGAACACAACCGGAGAGCTCTGGCTCAGAGGGCCCACCATCATGAAAGGGTATTTTGGTAATGTGGAGGCCACCACCTCAACGCTTGATTCTGAGGGATGGCTGAGAACCGGCGATCTATGTTACATTGATGAAGATGGTTTTATTTTTGTGGTGGATCGGCTTAAAGAACTCATCAAATATAAGGGCTATCAGGTGCCTCCGGCAGAATTAGAGGCATTATTGCTCACTCATCCCAGTATCTCCGATGCCGCTGTAATTCCATATCCAGACAAAGAGGTTGGCCAGTATCCAATGGCTTACGTGGTGAGAAAGGGTGGAAGTGACATTTCACATGAAGATATAATGCAACTCGTGGCAAGACAGGTGGCACCGTACAAGAGAATCCGGCGGGTTGCGTTCGTGGATTCCATTCCCAAGAACCCCTCCGAGCCCGCCGAGAAAAAGCAATTTACCGCAAATCGCACCGTTTTGGCGCTCTTCTTCTCTCAGTTCCCGGGTCCACTTTCCCTTTTCCGATATTTAGAGATAGGCCACTTGCCGTCGGGAAGGTCTAGATCTTTCTGGAAGCCACCTTCATATAGCACCTCCGCTGTTCTGCCCCGCCCCTTCGTCTCCTTCGGAAAATTTCTGTCCTGTGATTGGATTGAATCGAGCTCCGACTACAGAAGATTTCGCCGGTGGTGTATTGTGATTCTCGTCGACATTCATTTCCGTCGCTGCCGGTTCTTTTTTCCGTTGCTTGTACTATTTTTTCGTCTGAAGAGGTACGTTTTTCGTTGTAGCTTCCGGAATCCCTTGGTGGATTATGTATTTCCGTTTATTGAATTCAGTTTCGTCGGGATCGTCGAGTTTTCCTTTCGTTGTCTGGATGATTCTTTCCGTCGTAATTGGATCTCCACCTTCTTCTGCCTTCTGTGTTTCCCTCTGCAGCTGAATAGAATGGCGGACCATTCAAATGAAGGATCTAGCACCAGCAGTATTTCCGGGGAGACTGCGACTTCGATTATTGAGCTGAAAATCAAGACTTTAGATTCACATATCTACAGTTTTCAAGTGAATAAAGATATGCCGGTTCAATTATTCAAGGAGAAAATCGCCAATGAAATAGGAATCCCAGTGAATCAGCAACGTTTGATATTCAGGGGAAAGGTTTTAAAGGATGAACATTCTCTTTCTGAGTATTATTTGGAAAATGGACATACATTGCATTTAGTTGAAAGGCAACCAACACAGCAACATGCAGCATCAGATACTAGCTCTGGCGAAAGACCTGCAAATGTACCTTCTTCAACCAGTAACGAAGCTGGAGTTGGTGCCCCTCGAAATCGACAAATTGCACATAGTGTTGTTTTAGGAACATTTAATGTTGGGGATCAAGGTGAAGGCATTGTTCCTGATCTTTCTCGGGTTATTGGGGCCGTTCTGAATTCTATTGGACTAAGCAGCCAAAATGCAAACATCCCACCTGGTATGCAGTCTACGTTGCCTAACAATCGTGGCACAGCAAGTCAAGGAAATGAAACATTTAGAGCAAACAATGAGGCTGGAGGACAGGCAACGAGTCAAGCTCAAACTGGACAGGCATTTCCCAGCCAGCCATCACAAAGCTTTCCTCACGTGATTCAAATTCCACTTGCCAGTGCAGCCGTATCAGTTCCTTCCATTCATGTGCCCATTCCTGATGCTATGACAACACTTTCCGAGTTCATGAACCGTATGGAGCTTGCAATATCTCAGAATGGTGGAGATCTAACCAGGGTGGCACTGCCTACCAATCCACAAGGTTTACCAACCACTGAATCGTTGAGCATTGTCTTGCGTCATGCTCAACGGCTTCTAAGTGATTATGCCATATCTTCACTATCCCGTATTGCGGAGCGTTTGGAGCAAGATAGCTCTTCCACTGATCCCATTGTGAGGGGTCAAATTCAGGAAGAGTCGGTACAAGTAGGACTTAGGATGCAACAATTTGGTGCACTTCTTTTGGAACTGGGCCGTACCATCTTGACACTCCGTATGGGACAATCATCTGCTGAGTCGGTTGTTAACACTGGCCCAGCAGTGTATATCTCTCCTACGGGGCCAAATCCCTTGATGGTTCAGCCTTTCCCCCTTCAAACTAACCCCCTCCTTGGTGGTGCTGTACTACCATCAAACCCAGTTGTTGGTGCAGTAGGTATTGGAACTGCCCCTAGACACATCAACATTCACATACATGCTGGTGAGGATGATAGTGTTTTGATGCTGTGTTATTTTCATGTAATGCAATGTGCTTTCCTAAGTTCTGCCACTCTTTCTGCAGTTGGTACCAGGTCAAATAATGGGGAGGGAGCACCTGCAGATCGTCAGAATGTGGTCAATGGATCCACGGATTCAGGTGTAGCCCAGGCACCTCCTGTTGTCAACATTCCACATCCGCTGGGTGTTTCGATTTCTGCTGCTGTGCAACCTGGTGAAGATCAAGTGCGAACGGCAGTTCAGAATTCTTCTATTGGTTCTGGACAAGGGAGTGAACAGCAAAGTGATACTAAAAGGGACATGGGTGGAGAGTCGAGCGAGTCATTACCTGGGCGTGATTCGGAAACTGGAAATGACAAGATCGTCACAGACAATATTTATCGAGATACAGGAAGGTCTAGAAGCACACCTGATTTACCAACATGCTCTGGTAGTATGGGCTCTGAATTTGTTGGAAGAAATGAAGAAAATTTTCAGAGTCAGGCATCTTGTGAGAAGAGCACGGGAACTGGGTCTTCTCAAGCTGTTCCACTTGGACTTGGACTGGGGTGTTTGGAACGACCGAGGAGAGGCAAGCAGCAAAGTTCACAGGCTAAAGGGGGTAGCAGTGGAACCAGCCACAGCCAGGGTCATGCAGGCCAGCAGTTTTTACAATCTCTTGCCTCTAGTGCTTCTATGAATAGGTCAAATGCTTATGATCCCTCAAGCCTACAACAGACCGCTAGCCCAACTGTTCATAGCAGATCCTTGCATGGGCCAGGTTCTAACAGCCAAATTGATCTAGGAAGCAGCATGTCTCAAGTTTTGCAGAGTCCTGCTTTAAATGGACTATTGACAGGGCTTTCAGAGCAAACTGGCGCTGGTTCTCCTGATGTCTTGAGGAATATGTTGCAACAGATCACGCAAAGCCCTCAAATGAGAAATACAGTCAATCAAATTGCCCAGCAGGTTGACCCTCAAGATCTTGAGCAAATGTTTGCTGGGTCGGGAAGAGGCCAAGGCGGTGGTATCGATTTGTCAAGGATGTTCCAACAGATGATGCCTATTGTCTCTCAAGTGCTTGGAGGATCGCCAAGGCAACCATCTTCCTCAAACATGCAACGATCGCCAAGGCAACCACCTCTGTCAAACCTGGAAAGCGAGCAAATGCCTCATAGTGAGAGGTCTGGTAGTGGAGTGGAAACATCTAATGGCCAAAATTCTCAGATTGATGCCCAAGATCTTGCTCGAAGGATCATATCTACCAATTCGCCAAGGGACGTCTTCCGTGCTGTCGTTGAGAGTTCAGCTCGACTTTCTGGCAGTAGTAGTGAGGATATTGCAAATGAGTTGTGCAGCGATGAGACACTTGCTAAGGAATATGTGGAGATGTTATCAAGTGATGTAAACCGACGGTTACAAGGCAATTCAGACCAGGAAAAATAA | 4845 | 48.4 | MAVYGGDVPQVDPRSGFCKSTKIFHSKRRPIPLPPNQSLDATTFISSRPHNGKIALIDATTGQHITYSHLWESVDSVASSLSDMGIRKGHVILLLSPNSIFFPIICLAVMSLGAVITTTNPLNTPQEIAKQIADSNPILAFTTQQLIPKIASSKLPVVLIDGEIQIKKFSVKIVSTLSEMMRKKSSGSRVKERVDQNDTATLLYSSGTTGASKGVVSSHKNLIAMVQVVVTRFKLSEGEGTFICTVPMFHIYGLVAFATGLLSSGSTIVVLSKFEIHEMLSAIEKYRATYLPLVPPILVAMVNAAEQIKGKYDLGSLHTALSGGAPLGKEVIEGFVEKYPNVSILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEAKIVVPDTGEALPVNTTGELWLRGPTIMKGYFGNVEATTSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPSISDAAVIPYPDKEVGQYPMAYVVRKGGSDISHEDIMQLVARQVAPYKRIRRVAFVDSIPKNPSEPAEKKQFTANRTVLALFFSQFPGPLSLFRYLEIGHLPSGRSRSFWKPPSYSTSAVLPRPFVSFGKFLSCDWIESSSDYRRFRRWCIVILVDIHFRRCRFFFPLLVLFFRLKRYVFRCSFRNPLVDYVFPFIEFSFVGIVEFSFRCLDDSFRRNWISTFFCLLCFPLQLNRMADHSNEGSSTSSISGETATSIIELKIKTLDSHIYSFQVNKDMPVQLFKEKIANEIGIPVNQQRLIFRGKVLKDEHSLSEYYLENGHTLHLVERQPTQQHAASDTSSGERPANVPSSTSNEAGVGAPRNRQIAHSVVLGTFNVGDQGEGIVPDLSRVIGAVLNSIGLSSQNANIPPGMQSTLPNNRGTASQGNETFRANNEAGGQATSQAQTGQAFPSQPSQSFPHVIQIPLASAAVSVPSIHVPIPDAMTTLSEFMNRMELAISQNGGDLTRVALPTNPQGLPTTESLSIVLRHAQRLLSDYAISSLSRIAERLEQDSSSTDPIVRGQIQEESVQVGLRMQQFGALLLELGRTILTLRMGQSSAESVVNTGPAVYISPTGPNPLMVQPFPLQTNPLLGGAVLPSNPVVGAVGIGTAPRHINIHIHAGEDDSVLMLCYFHVMQCAFLSSATLSAVGTRSNNGEGAPADRQNVVNGSTDSGVAQAPPVVNIPHPLGVSISAAVQPGEDQVRTAVQNSSIGSGQGSEQQSDTKRDMGGESSESLPGRDSETGNDKIVTDNIYRDTGRSRSTPDLPTCSGSMGSEFVGRNEENFQSQASCEKSTGTGSSQAVPLGLGLGCLERPRRGKQQSSQAKGGSSGTSHSQGHAGQQFLQSLASSASMNRSNAYDPSSLQQTASPTVHSRSLHGPGSNSQIDLGSSMSQVLQSPALNGLLTGLSEQTGAGSPDVLRNMLQQITQSPQMRNTVNQIAQQVDPQDLEQMFAGSGRGQGGGIDLSRMFQQMMPIVSQVLGGSPRQPSSSNMQRSPRQPPLSNLESEQMPHSERSGSGVETSNGQNSQIDAQDLARRIISTNSPRDVFRAVVESSARLSGSSSEDIANELCSDETLAKEYVEMLSSDVNRRLQGNSDQEK | 1614 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 298453 | 311820 | + | CmaCh09G000690.1 | Cma09g00069 | 300074 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g00069 | 1614 | ProSitePatterns | Putative AMP-binding domain signature. | 202 | 213 | IPR020845 | - | |
Cma09g00069 | 1614 | CDD | 4CL | 33 | 536 | - | - | |
Cma09g00069 | 1614 | Pfam | AMP-binding enzyme C-terminal domain | 463 | 536 | IPR025110 | - | |
Cma09g00069 | 1614 | Gene3D | - | 720 | 815 | - | - | |
Cma09g00069 | 1614 | PRINTS | Ubiquitin signature | 761 | 781 | IPR019956 | - | |
Cma09g00069 | 1614 | PRINTS | Ubiquitin signature | 782 | 803 | IPR019956 | - | |
Cma09g00069 | 1614 | Gene3D | - | 450 | 549 | IPR045851 | - | |
Cma09g00069 | 1614 | PANTHER | LARGE PROLINE-RICH PROTEIN BAG6 | 710 | 1613 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1493 | 1542 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 892 | 929 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1215 | 1401 | - | - | |
Cma09g00069 | 1614 | Pfam | Ubiquitin family | 732 | 802 | IPR000626 | GO:0005515 | |
Cma09g00069 | 1614 | PANTHER | OS07G0498800 PROTEIN | 710 | 1613 | - | - | |
Cma09g00069 | 1614 | SUPERFAMILY | Ubiquitin-like | 727 | 803 | IPR029071 | - | |
Cma09g00069 | 1614 | ProSiteProfiles | Ubiquitin domain profile. | 730 | 805 | IPR000626 | GO:0005515 | |
Cma09g00069 | 1614 | SUPERFAMILY | Acetyl-CoA synthetase-like | 45 | 536 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1163 | 1195 | - | - | |
Cma09g00069 | 1614 | Pfam | AMP-binding enzyme | 50 | 454 | IPR000873 | - | |
Cma09g00069 | 1614 | SMART | ubq_7 | 730 | 801 | IPR000626 | GO:0005515 | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1163 | 1190 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 802 | 832 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1260 | 1315 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1330 | 1401 | - | - | |
Cma09g00069 | 1614 | Gene3D | - | 21 | 449 | IPR042099 | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 802 | 835 | - | - | |
Cma09g00069 | 1614 | MobiDBLite | consensus disorder prediction | 1215 | 1236 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g02002 | Cma09g00069 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01999 | Cma-Chr1:12837561 | Cma09g00069 | Cma-Chr9:298453 | 0 | dispersed | |
Cma05g01242 | Cma-Chr5:9530020 | Cma09g00069 | Cma-Chr9:298453 | 7.10E-63 | dispersed | |
Cma09g00069 | Cma-Chr9:298453 | Cma18g00222 | Cma-Chr18:1201248 | 8.51E-151 | dispersed | |
Cma09g00069 | Cma-Chr9:298453 | Cma09g00070 | Cma-Chr9:312643 | 6.28E-24 | tandem | |
Cma01g00515 | Cma-Chr1:2648430 | Cma09g00069 | Cma-Chr9:298453 | 5.61E-138 | transposed | |
Cma01g02000 | Cma-Chr1:12846028 | Cma09g00069 | Cma-Chr9:298453 | 3.79E-19 | transposed | |
Cma01g02002 | Cma-Chr1:12847571 | Cma09g00069 | Cma-Chr9:298453 | 0 | transposed | |
Cma02g01464 | Cma-Chr2:8398833 | Cma09g00069 | Cma-Chr9:298453 | 3.90E-50 | transposed | |
Cma03g01449 | Cma-Chr3:9077395 | Cma09g00069 | Cma-Chr9:298453 | 3.60E-25 | transposed | |
Cma04g01396 | Cma-Chr4:7127905 | Cma09g00069 | Cma-Chr9:298453 | 5.06E-139 | transposed | |
Cma08g00710 | Cma-Chr8:4323953 | Cma09g00069 | Cma-Chr9:298453 | 3.34E-36 | transposed | |
Cma14g00225 | Cma-Chr14:991400 | Cma09g00069 | Cma-Chr9:298453 | 5.54E-133 | transposed | |
Cma15g01097 | Cma-Chr15:6987825 | Cma09g00069 | Cma-Chr9:298453 | 1.32E-54 | transposed | |
Cma17g00072 | Cma-Chr17:343297 | Cma09g00069 | Cma-Chr9:298453 | 1.26E-18 | transposed | |
Cma19g00204 | Cma-Chr19:1351565 | Cma09g00069 | Cma-Chr9:298453 | 2.15E-128 | transposed | |
Cma01g01998 | Cma-Chr1:12835665 | Cma09g00069 | Cma-Chr9:298453 | 2.66E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g00069 | K10526 | - | csv:101216180 | 1376.3 |