Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00114 ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCAGGCAAATGCTCCGACGCTGGCGCAACAAGGCCCGAATGTCCGCTAACCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGCGTTGGAACCAGCTGCCGGCGGTTCGTCGTCAGAGCCGCTTACTTAAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTCACCAACCAAGGCCCGTTGGCGATCCCTTGCGACGAGTCGGTTTTCGAGGAAGTCATCCGGTTCATCTCCAGATCCGATTCGCCCAACTCGGGGCGGTTCGTGAAATTAGACGAATTTCAAACTTTCTGCCATATCGGAATCAGAACCGGCCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTAGCCGAGAAATCCATCTGGTAA 453 55.85 MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAAYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQTFCHIGIRTGLDLWPESRPLLHGLAEKSIW 150
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 506893 507345 - CmaCh09G001140.1 Cma09g00114 300119
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00114 150 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Cma09g00114 150 PANTHER SMALL AUXIN-UP RNA-RELATED 6 143 - -
Cma09g00114 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 143 IPR003676 GO:0009733
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00114 Cma-Chr9:506893 Cma19g00707 Cma-Chr19:7228844 8.45E-65 dispersed
Cma01g01962 Cma-Chr1:12666544 Cma09g00114 Cma-Chr9:506893 5.69E-102 wgd
Cma02g00356 Cma-Chr2:1739187 Cma09g00114 Cma-Chr9:506893 1.11E-56 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00114 K14488 - csv:101216342 300.056