Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00170 ATGATTCTCTTTGCTGTTTCCCTTGTTGTTGTTGCTCTTCTTCTTACAATCCTCCTGAAATTTCTCTACTCCACTTTCTGGCTTCCATGGAGGATTCAAAACCACTTCCGAAAGCAGGGCATAAAGGGCCCTCCCTACCGTCCGATCATCGGCAACTCCACCGATATCCGACGTCTGTTCGCGGAGGCACAATCTAAGCCGATTCCGTTTCACCACGATATACTCAGTCGCGCTCTCCCTTTTTACTTCCGGTGGTCCGGTGAGTACGGAAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCCATTTCCGACCCGGATCTAATTAAGGAAGTGCTGGTAAATACGCACGGGTCTTTTCGAAGGATCCAGTTCAACCCGCAGGCGAAGTTGCTTTTTGGAGAGGGACTGCTAGGACTGGACGGGGAAAAATGGGTCGCGCGTCGGAGAATTGCGAATCAGGCTTTCAACATGGAGCGTATAAAGGGGTGGGTACCCGAAATAGTTGCTAGTGTGTCGAATGTTTTGGAGAAATGGGAAGAGATGAAGGGCGGAATGGAGGAGATTGAATTGGACGTTCACAAAGAATTTCGTCGCCTCTCAGCCGACGTAATTTCAAGAACCGCATTTGGAAGTAACTTTGAAGAAGGCAAGCGCATCTTCAGTTTGCAGGAACAGCAAACACATCTCTTCTCCCAAGCAGTCAGAAGTGTTTATATTCCTGGCTTCAGATTTTTGCCGACGAAGAAGAACAGAGAAAGATGGAGCCTGGAGAAAGAAACTCGTGAATCGATAAAAGAGCTGATTGAGGCAAACAGCAAAGGAAGGGAAAACTCAACTAATCTACTGAGCTTGTTAATGTCATCTTACAAGAACCAGAAGGGGGAAGAAGAAAGACTTGGAGTGGAGGAAATCATTGATGAATGTAAGACATTCTATTTCGCGGGAATGGAAACAACTTCTCATCTTTTAACTTGGGCTCTTCTGCTACTAGCAAAGCATCCAGAGTGGCAAGATAAGGCCAGACAAGAAGTTCTCAGCGTCTGCGCCCATAAAACACCTCCTGCGCCGGAGAATTTGAGCGAACTTAAGCTTGTAGGCATGATAATTAACGAAGCACTTCGACTTTATCCTCCAGCAGTGATGTTGACGAGGCAGGCAGTGAAACAGGTGACACTAGGAAGCTTAGACATTCCTGGTGGCACAGAGCTGTTCTTGGCGTTGGCTGCTGTCCACCATGAGAAAGAGATTTGGGGAGAGGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACACTTGGCTTCCTTTCTGCCATTTTCGTTGGGTCCCAGGATTTGTGTAGGCCAAAACATGGCGTTGATTGAGGCCAAAGTCGCCCTGGCCATGATAATTCAACGATTCTCTGTTGCTGTTTCTCCAACCTACACTCATGCCCCTTTGCTTTTTGTAACCTTACAGCCTCAGTTTGGTGCTCACCTCCTTCTTAGGAGCTTATGTAACTGA 1521 47.4 MILFAVSLVVVALLLTILLKFLYSTFWLPWRIQNHFRKQGIKGPPYRPIIGNSTDIRRLFAEAQSKPIPFHHDILSRALPFYFRWSGEYGKTFLYWFGSKPRLAISDPDLIKEVLVNTHGSFRRIQFNPQAKLLFGEGLLGLDGEKWVARRRIANQAFNMERIKGWVPEIVASVSNVLEKWEEMKGGMEEIELDVHKEFRRLSADVISRTAFGSNFEEGKRIFSLQEQQTHLFSQAVRSVYIPGFRFLPTKKNRERWSLEKETRESIKELIEANSKGRENSTNLLSLLMSSYKNQKGEEERLGVEEIIDECKTFYFAGMETTSHLLTWALLLLAKHPEWQDKARQEVLSVCAHKTPPAPENLSELKLVGMIINEALRLYPPAVMLTRQAVKQVTLGSLDIPGGTELFLALAAVHHEKEIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNMALIEAKVALAMIIQRFSVAVSPTYTHAPLLFVTLQPQFGAHLLLRSLCN 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 722558 725250 + CmaCh09G001700.1 Cma09g00170 300175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00170 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Cma09g00170 506 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 Pfam Cytochrome P450 83 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 499 - -
Cma09g00170 506 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00170 506 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 9 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00170 Cma-Chr9:722558 Cma10g00756 Cma-Chr10:3444531 1.44E-157 dispersed
Cma09g00170 Cma-Chr9:722558 Cma11g00556 Cma-Chr11:2693602 1.33E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00170 - - cmos:111443307 947.962