Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00199 ATGAAGGGCTTGGGCTGTTGTTTGTTTATCTGTGTTCTTCTGTCATCATTTTCAATTTTGTCTACGGCGCTTACTGATGCGGAAGCTTCTTTCATTGCCGGCCGCCAACTTCTAGCCCTGCATATGAACGAAGATTTGCCTGACAATTACGATCCCAAGGTCGAAATCAATGAGACCTTTGCCAATCCAAGGCTCCGACGGGCATACGTTGCGCTTCAAGCCTGGAAGGTGGCTATTTATTCAGACCCTTTAAACACCACCGCCAATTGGGTTGGCGCTGATGTCTGCCACTACACTGGAGTTTACTGCGCTACTGCTCTCGACGACTCCACCGTCGAAGTCGTCGCCGGCATTGACCTTAACCACGCCGACATTGCTGGTTACCTGCCGGTCGAGCTCGGTCTGCTTGCCGACATAGCCTTATTCCATATCAACACCAACCGATTCTGCGGGATCATCCCAACCAGCTTCTCGAGGATGACTCTGCTTCACGAGCTCGACCTTAGCAACAACCGATTTGTTGGCTATTTTCCTGAGGTGGTTGTGAGGATTCCTAATCTGAAATTTCTTGACCTCAGGTTCAATAATTTCGAAGGCCCATTGCCTCCTCAACTTTTCAACAAGACACTCGATGCCATTTTCCTTAACAACAACAGATTCACCTCCAACATTCCCGATACTTTTGGGGATTCGCCGGCGTCGGTGATTGTGTTTGCCTACAACCATTTCACGGGATGCGTTCCGAGCTGCATTGGAAAAATGGGGAACACACTGAACCAGTTGGTAATGTTGAACAATGATTTCGCTGGTTGTTTGCCCCCTGAAGTTGGGATGCTTGGGAATGCCGTGGTTTTCGATATTTCCGCCAACATGTTTAGTGGGATCTTGTCCAAGAGCTTCGATGGCCTAAAGAAGGTCGAGATTTTGGATATTTCTAACAATTCCTTGACTGGGGTTGTGGAGGAAGGCTTGTGCAACTTGCCCAAATTGGCTGAATTCACCTTCTCTAACAATTTCTTCAATGGCGAGGCGGAGAAGTGCGTGCCGCAGAGTAGAAAGGATGTTGTGTTCGATGATACTGCAAATTGCTTGCCCGAGAGGCCCAAGCAGAAGGCGGCCGAGGCATGTACTCCGGTGACCAGCAAGAGTGTTGATTGCAGTAAGGCTATGTGCGGCGGAGGAGCGCCATCGCCGTCGTCGATGCCGTGGCCATGGAAGTCACACTCACCACACACACCACAAACCCCAGGACGTATTCATCATCCTCTTTCTCCACCTTCATTACACTCCCAACCACCAACGCCCTCATCACCCCAACCACCAGTTCACTCTCACACACCATCGGCCTCATCACCCCAACCACCGGTTCACTCTCACACCCCAGCTGCCTCATCACCCGAAGCACCAGTCGACTCTCACACCCCAGCAGCCTCGTCACCCGAAGCACCAGTCTCTCACACCCCGACAGCCTCGTCACCCGAGGCACCAGTCGACTCTGAGACCCCGGCGGCCCCATCTCCAGAGGCACCAGTCGACTCTCACACCCCGGCAGCCTCGTCACCAGAGGCACCAGTCGACTCTAAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTCGACTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTCGACTCAAAGACCCCGGCGACCCCATCCCCCGAGGCACCAGTCGACTCTGAAACCCCGGCTGCCCTATCACCCGAGGCAACAGTCGACTCTGAAACCCCGGCTGCCCCATCCCCCGAGGCAACAGTCGACTCTAAAACCCCGGCTGCCCCATCCCCCGAGGCAACAGTCGACTCTGAAACCCCGGCTGCCCCATCCCCCGAGGCAACAGTCGACTCTGAAACCCCAGGTGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCAGGTGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCAGGTGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCAGGTGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCAGCGGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCAGCGGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCGGGTGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGACCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGACCCCATCACCCGAAACCCCAGCGGCCCCATCACCCGAGGCAACAGTCGACTCTGAAACCCCGGGTGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGCAACCCCGGCGACCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGACCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGACCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGACGGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAGCCCCAGCAGCCCCATCCCCTGAGGCGCCAATAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCGCCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCGCCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCGCCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCGCCAGTAGAGTCTGAGACCCCGGCGGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAACCCCGGCGGCCCCATCACCCGAAGCACCAGTCGACTCTGAAACCCCGGTGGCCCCATCACCCGAAACCCCAGTGGCCTTATCACCTGAAGCACCAGTCGACTCTGAAGCCCCAGCAGCCCCATCCCCCGAGGCGCCAGTAGAGTCTGAGACCCCGACGGCCCCATCCCCCGAGGCGTCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTCGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTCGAGTCTGAGACCCCGGCAGCCCCATCCCCCGAGGCACCAGTCGAGTCTGAGACCCCGGCAGCCCCATCCCCCGAGGCACCAGTAGAGTCTGAGACCCCGGCAGCCCCATCCCCCGAGGCACCAGTAGAGTCTGAGACCCCGGCAGCCCCATCCCCCGAGGCACCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCTCGAGGCACCAGTAGAGTCTGAGACCCCGGCGGCCCCATCTCCCAAGGCACCAGTAGAGTCTGAGACCCCGGCGGCCCCATCCCCCGAGGCACCAGTCGACTCTGAAAGCCCCCCAGCGGCCCCAACCCCCGAGGCACCAGTCGACTCTGAAAGCCCCCCAGCGGCCCCAACACCCGAGGCACCAGTCGACTCTGAAAGCCCCCCAGCGGCCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCTACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACACGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGACTCTGAAAGCCCCCCAGCGACCCCAACACCCGAGGCACCCGTCGAAGACATCATTCTCCCTCCAAACTTGGGCTTCGTGTACTCATCACCGCCTCCACCAATGTTCCCAGGCTACTAA 4956 62.11 MKGLGCCLFICVLLSSFSILSTALTDAEASFIAGRQLLALHMNEDLPDNYDPKVEINETFANPRLRRAYVALQAWKVAIYSDPLNTTANWVGADVCHYTGVYCATALDDSTVEVVAGIDLNHADIAGYLPVELGLLADIALFHINTNRFCGIIPTSFSRMTLLHELDLSNNRFVGYFPEVVVRIPNLKFLDLRFNNFEGPLPPQLFNKTLDAIFLNNNRFTSNIPDTFGDSPASVIVFAYNHFTGCVPSCIGKMGNTLNQLVMLNNDFAGCLPPEVGMLGNAVVFDISANMFSGILSKSFDGLKKVEILDISNNSLTGVVEEGLCNLPKLAEFTFSNNFFNGEAEKCVPQSRKDVVFDDTANCLPERPKQKAAEACTPVTSKSVDCSKAMCGGGAPSPSSMPWPWKSHSPHTPQTPGRIHHPLSPPSLHSQPPTPSSPQPPVHSHTPSASSPQPPVHSHTPAASSPEAPVDSHTPAASSPEAPVSHTPTASSPEAPVDSETPAAPSPEAPVDSHTPAASSPEAPVDSKTPAAPSPEAPVDSETPAAPSPEAPVDSKTPATPSPEAPVDSETPAALSPEATVDSETPAAPSPEATVDSKTPAAPSPEATVDSETPAAPSPEATVDSETPGAPSPEATVDSETPGAPSPEATVDSETPGAPSPEATVDSETPGAPSPEATVDSETPAAPSPEATVDSETPAAPSPEATVDSETPGAPSPETPVALSPEAPVDSETPATPSPETPVALSPEAPVDSETPATPSPETPAAPSPEATVDSETPGAPSPETPVALSPEAPVDSETPAAPSPETPVALSPEAPVDSATPATPSPETPVALSPEAPVDSETPATPSPETPVALSPEAPVDSETPATPSPETPVALSPEAPVDSETPTAPSPETPVALSPEAPVDSETPAAPSPETPVALSPEAPVDSEAPAAPSPEAPIESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPETPVALSPEAPVDSETPAAPSPEAPVDSETPVAPSPETPVALSPEAPVDSEAPAAPSPEAPVESETPTAPSPEASVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSPEAPVESETPAAPSLEAPVESETPAAPSPKAPVESETPAAPSPEAPVDSESPPAAPTPEAPVDSESPPAAPTPEAPVDSESPPAAPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAHVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVDSESPPATPTPEAPVEDIILPPNLGFVYSSPPPPMFPGY 1651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 826607 831562 + CmaCh09G001990.1 Cma09g00199 300204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00199 1651 MobiDBLite consensus disorder prediction 1574 1628 - -
Cma09g00199 1651 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 528 - -
Cma09g00199 1651 MobiDBLite consensus disorder prediction 1235 1558 - -
Cma09g00199 1651 SUPERFAMILY L domain-like 78 343 - -
Cma09g00199 1651 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 2 528 - -
Cma09g00199 1651 MobiDBLite consensus disorder prediction 392 1651 - -
Cma09g00199 1651 MobiDBLite consensus disorder prediction 426 448 - -
Cma09g00199 1651 Gene3D Ribonuclease Inhibitor 68 364 IPR032675 -
Cma09g00199 1651 MobiDBLite consensus disorder prediction 478 496 - -
Cma09g00199 1651 Pfam Leucine rich repeat 143 197 IPR001611 GO:0005515
Cma09g00199 1651 Pfam Leucine rich repeat 285 338 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g01334 Cma-Chr5:10085979 Cma09g00199 Cma-Chr9:826607 9.31E-19 dispersed
Cma06g01378 Cma-Chr6:8987856 Cma09g00199 Cma-Chr9:826607 5.37E-111 dispersed
Cma08g00896 Cma-Chr8:5557269 Cma09g00199 Cma-Chr9:826607 3.94E-167 dispersed
Cma09g00199 Cma-Chr9:826607 Cma17g00446 Cma-Chr17:2660615 9.63E-145 dispersed
Cma10g00602 Cma-Chr10:2780772 Cma09g00199 Cma-Chr9:826607 5.85E-93 dispersed
Cma11g01919 Cma-Chr11:12664848 Cma09g00199 Cma-Chr9:826607 7.88E-125 transposed
Cma01g01874 Cma-Chr1:12291107 Cma09g00199 Cma-Chr9:826607 0 wgd
Cma04g00506 Cma-Chr4:2578370 Cma09g00199 Cma-Chr9:826607 7.62E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00199 - - cmos:111442932 1382.08