Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cma09g00261	ATGAGAAACTACAGAATGGCGAAACGGCATTGCTACCCACTTTCAGTTGCGCATTCAATTTCAGGTCACCAAAACGTCTCACTTTTTCTTGATTCCCTCTACTGCTTGGAGGAGGAGGACGGAATTGGGGATGGACATTCCCAGCCAAAGATCGAAGCTTTCTCGATAAATGTTAACGTCGATTCCCCGAATTCTGTGTTCTTGTCGGACAGGGACTTTCTCTGGGAAGACGAGGAATTGGTGTCTCTGTTCTCAAAGGAGAACAGAAATAAGCTCCACGATGCTCTCCCACACAATCCCTCTCTAGCTGCGGCTCGCTCCGACGCGGTTGAGTGGATTCTCAAGGTCAATGCCCATTACTCCTTTACTACCCTCACCGCCGTTTTGGCCGTTGATTATGTCGACAGGTTCCTGTCCAGCCCCCATTTTCAGATCGACAAGCCATGGATGACCCATCTCACCGCCATTGCTTGTTTATCTCTTGCTGCTAAAGTGGAGGAAACCGAAGTTCCCCTGCTTTTAGACCTCCAGGTGGAGGAAAATGGGTACTTCTTCGAAGCTAAAACCATTAAAAGAATGGAGATTCTTGTTCTCTCTACTCTTCTTTGGAGGATGAATCCGGTGAACCCACTTTCATTTTTGGACTATATTGTAAGACGGCTCGGCTTCAAGGACCAGCTCTGTTCTGAATTCCTCTGTAAATGTGAAAGATTACTTCTTTCTGTCATTTTAGATTCCAGATTCGTATGCTTTCTTCCATCACTGATAGCAAGCGCCATTATTTTTCAAGTTATCAACGACAAAGAACCCCATGTCGCAGCAAAATACCAGGATCAGCTTCTGGGTTTTCTTCAAATCGACAAGAATAAGGTGGAAGATTGCTCACAATTCATCATAGAGGCTTCATCGAGAGGACACACAAACAAACAAAGATTTGGTTTAGTGGACATGTCGTGCAGCTCAAATGGTCGGACTCAGAATGTGGACCGTGTAGTGTCGTCGCCGGAGACAGCAACGAAGAAGAGGAAAATTGATGAACAGCCACCGTAG	1050	45.9	MRNYRMAKRHCYPLSVAHSISGHQNVSLFLDSLYCLEEEDGIGDGHSQPKIEAFSINVNVDSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTTLTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEENGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILDSRFVCFLPSLIASAIIFQVINDKEPHVAAKYQDQLLGFLQIDKNKVEDCSQFIIEASSRGHTNKQRFGLVDMSCSSNGRTQNVDRVVSSPETATKKRKIDEQPP	349

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
9	1092895	1094520	+	CmaCh09G002610.1	Cma09g00261	300266

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Cma09g00261	349	Gene3D	-	104	206	-	-
Cma09g00261	349	ProSitePatterns	Cyclins signature.	106	137	IPR006671	-
Cma09g00261	349	SUPERFAMILY	Cyclin-like	75	206	IPR036915	-
Cma09g00261	349	SUPERFAMILY	Cyclin-like	209	309	IPR036915	-
Cma09g00261	349	SMART	cyclin_7	111	199	IPR013763	-
Cma09g00261	349	Pfam	Cyclin, N-terminal domain	97	206	IPR006671	-
Cma09g00261	349	MobiDBLite	consensus disorder prediction	335	349	-	-
Cma09g00261	349	SMART	Cyclin_C_2	208	326	IPR004367	-
Cma09g00261	349	CDD	CYCLIN	106	198	IPR013763	-
Cma09g00261	349	Pfam	Cyclin, C-terminal domain	208	310	IPR004367	-
Cma09g00261	349	Gene3D	-	207	296	-	-
Cma09g00261	349	PANTHER	CYCLIN D3.1 PROTEIN	56	332	-	-
Cma09g00261	349	MobiDBLite	consensus disorder prediction	325	349	-	-
Cma09g00261	349	PANTHER	CYCLINS	56	332	IPR039361	-

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cma09g00261	K14505	CYCD3; cyclin D3, plant	-	csv:101218302	541.962

WGDs- Genes

Gene_1	Gene_2	Event_name
Cma05g00163	Cma09g00261	CCT
Cma09g00261	Cma12g00567	CCT
Cma09g00261	Cma12g00567	ECH
Cma05g00163	Cma09g00261	ECH
Cma01g01813	Cma09g00261	CST

Dupl-types

Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
Cma09g00261	Cma-Chr9:1092895	Cma03g00834	Cma-Chr3:6287640	1.07E-49	dispersed
Cma01g01813	Cma-Chr1:12047797	Cma09g00261	Cma-Chr9:1092895	0	wgd
Cma11g01728	Cma-Chr11:11487243	Cma09g00261	Cma-Chr9:1092895	6.46E-71	wgd
Cma12g00567	Cma-Chr12:2965391	Cma09g00261	Cma-Chr9:1092895	2.24E-102	wgd
Cma16g00347	Cma-Chr16:1632612	Cma09g00261	Cma-Chr9:1092895	7.38E-88	wgd
Cma19g00585	Cma-Chr19:6507822	Cma09g00261	Cma-Chr9:1092895	1.11E-73	wgd
Cma04g00476	Cma-Chr4:2429635	Cma09g00261	Cma-Chr9:1092895	1.25E-89	wgd
Cma05g00163	Cma-Chr5:698112	Cma09g00261	Cma-Chr9:1092895	3.18E-109	wgd
Cma07g00683	Cma-Chr7:3002281	Cma09g00261	Cma-Chr9:1092895	1.72E-78	wgd

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi18g719	Blo01g01517	Blo12g00970	.	.	.	.	Bma04g00152	.	Cmo05g00163	Cmo12g00510	Cma01g01813	Cma09g00261	Car01g01415	Car12g00528	Sed10g2003	Cpe06g00180	Cpe07g00498	Bhi04g00381	Tan02g0947	Cmetu01g0988	.	Hepe08g1303	.	Lcy13g2102	Cla08g01590	Cam08g2089	Cec08g1670	Cco08g1802	Clacu08g1775	.	Cre08g1559	.	Cone7ag1351	Cone17ag0862	Cone20ag0209	Lsi04g01520	Csa04g02445	.	Cme03g02070	Blo17g00869	Blo18g00706	.	.	Bpe02g01789	Bpe05g00034	Bma01g00666	.	Sed11g0930	Cmo01g01869	Cmo09g00254	Cma12g00567	Cma05g00163	Car05g00140	Car09g00219	Cpe11g00137	Cpe02g00199	Bhi09g03276	Tan01g4734	Cmetu07g1860	.	Hepe01g1799	Mch11g0329	.	Cla05g02076	Cam05g2226	Cec05g2245	Cco05g2287	Clacu05g2220	Cmu05g2087	Cre05g2211	Lsi08g01495	Csa02g01926	Chy07g00160	.

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Cma04g01421	.	59	320	Core Cell Cycle Gene Families	AT3G48750	87.4	7.5e-136	480.7
Cma18g00938	.	8	340	Core Cell Cycle Gene Families	AT3G48750	68.5	1.2e-125	446.8
Cma07g01185	.	1	300	Core Cell Cycle Gene Families	AT3G48750	56.5	9.9e-96	347.4
Cma01g02040	.	11	307	Core Cell Cycle Gene Families	AT3G48750	53.4	1.6e-93	340.1
Cma07g01185	.	1	305	Core Cell Cycle Gene Families	AT3G54180	84.1	7.1e-153	537.3
Cma01g02040	.	11	310	Core Cell Cycle Gene Families	AT3G54180	65.5	2.1e-117	419.5
Cma04g01421	.	59	320	Core Cell Cycle Gene Families	AT3G54180	54.9	1.6e-83	307.0
Cma07g01185	.	1	305	Core Cell Cycle Gene Families	AT2G38620	71.8	1.8e-122	436.0
Cma01g02040	.	11	310	Core Cell Cycle Gene Families	AT2G38620	57.7	6.0e-94	341.3
Cma01g02040	.	1	307	Core Cell Cycle Gene Families	AT1G76540	84.4	9.0e-156	547.0
Cma07g01185	.	1	300	Core Cell Cycle Gene Families	AT1G76540	66.0	6.3e-117	417.9
Cma04g01421	.	55	320	Core Cell Cycle Gene Families	AT1G76540	53.6	1.1e-84	310.8
Cma01g02040	.	8	307	Core Cell Cycle Gene Families	AT1G20930	88.3	6.7e-159	557.4
Cma07g01185	.	1	303	Core Cell Cycle Gene Families	AT1G20930	67.4	8.0e-120	427.6
Cma04g01421	.	55	320	Core Cell Cycle Gene Families	AT1G20930	55.5	1.8e-87	320.1
Cma20g00021	.	1	521	Core Cell Cycle Gene Families	AT5G10270	74.6	3.5e-218	755.0
Cma04g02532	.	143	688	Core Cell Cycle Gene Families	AT5G10270	69.2	6.4e-212	734.2
Cma01g00843	.	145	461	Core Cell Cycle Gene Families	AT5G10270	53.8	2.8e-98	356.7
Cma11g01252	.	61	379	Core Cell Cycle Gene Families	AT5G10270	51.3	5.3e-97	352.4
Cma06g01464	CST	103	419	Core Cell Cycle Gene Families	AT5G10270	52.9	5.3e-97	352.4
Cma10g01091	CCT,ECH	99	417	Core Cell Cycle Gene Families	AT5G10270	51.0	2.6e-96	350.1
Cma04g00549	CST	123	439	Core Cell Cycle Gene Families	AT5G10270	54.4	3.4e-96	349.7
Cma13g00826	CST	93	409	Core Cell Cycle Gene Families	AT5G10270	53.5	5.8e-96	349.0
Cma09g01247	.	136	452	Core Cell Cycle Gene Families	AT5G10270	52.1	7.6e-96	348.6
Cma06g00891	.	148	464	Core Cell Cycle Gene Families	AT5G10270	51.8	1.3e-95	347.8
Cma16g00396	CST	198	514	Core Cell Cycle Gene Families	AT5G10270	54.1	2.9e-95	346.7
Cma12g01100	CCT,ECH	44	362	Core Cell Cycle Gene Families	AT5G10270	51.6	3.8e-95	346.3
Cma14g01644	CST	115	431	Core Cell Cycle Gene Families	AT5G10270	52.0	1.1e-94	344.7
Cma18g00299	CST	93	421	Core Cell Cycle Gene Families	AT5G10270	51.0	1.9e-94	344.0
Cma13g01092	.	119	437	Core Cell Cycle Gene Families	AT5G10270	51.3	9.3e-94	341.7
Cma01g00805	.	119	437	Core Cell Cycle Gene Families	AT5G10270	51.0	2.3e-92	337.0
Cma20g00021	.	65	520	Core Cell Cycle Gene Families	AT5G64960	70.9	1.5e-178	623.2
Cma04g02532	.	207	687	Core Cell Cycle Gene Families	AT5G64960	68.0	8.3e-174	607.4
Cma20g00202	CCT,CST,ECH	817	1079	Core Cell Cycle Gene Families	AT5G64960	54.0	2.2e-81	300.4
Cma11g01252	.	115	379	Core Cell Cycle Gene Families	AT5G64960	51.4	4.8e-81	299.3
Cma01g00843	.	199	461	Core Cell Cycle Gene Families	AT5G64960	53.2	1.1e-80	298.1
Cma13g00826	CST	147	409	Core Cell Cycle Gene Families	AT5G64960	53.2	2.4e-80	297.0
Cma04g00549	CST	177	439	Core Cell Cycle Gene Families	AT5G64960	54.0	3.1e-80	296.6
Cma02g00097	CCT,CST,ECH	170	434	Core Cell Cycle Gene Families	AT5G64960	52.5	3.1e-80	296.6
Cma06g00891	.	202	464	Core Cell Cycle Gene Families	AT5G64960	52.5	3.1e-80	296.6
Cma06g01464	CST	157	419	Core Cell Cycle Gene Families	AT5G64960	51.8	5.3e-80	295.8
Cma10g01091	CCT,ECH	153	417	Core Cell Cycle Gene Families	AT5G64960	50.4	2.0e-79	293.9
Cma09g01247	.	190	452	Core Cell Cycle Gene Families	AT5G64960	52.9	2.6e-79	293.5
Cma16g00396	CST	252	514	Core Cell Cycle Gene Families	AT5G64960	53.6	2.6e-79	293.5
Cma18g00299	CST	147	409	Core Cell Cycle Gene Families	AT5G64960	51.8	1.0e-78	291.6
Cma13g01092	.	173	437	Core Cell Cycle Gene Families	AT5G64960	50.7	2.9e-78	290.0
Cma14g01644	CST	169	431	Core Cell Cycle Gene Families	AT5G64960	51.1	3.8e-78	289.7
Cma12g01100	CCT,ECH	98	362	Core Cell Cycle Gene Families	AT5G64960	50.7	3.8e-78	289.7
Cma01g00805	.	173	437	Core Cell Cycle Gene Families	AT5G64960	50.4	7.2e-77	285.4
Cma11g00298	CST	4	414	Core Cell Cycle Gene Families	AT1G73690	74.2	5.1e-172	601.3
Cma10g00319	CST	374	793	Core Cell Cycle Gene Families	AT1G73690	56.0	1.8e-121	433.3
Cma18g00938	.	8	226	Core Cell Cycle Gene Families	AT1G73690	51.6	3.4e-59	226.5
Cma11g00298	CST	12	342	Core Cell Cycle Gene Families	AT1G66750	77.1	1.4e-154	543.1
Cma10g00319	CST	382	776	Core Cell Cycle Gene Families	AT1G66750	55.8	9.8e-119	424.1
Cma18g00938	.	6	226	Core Cell Cycle Gene Families	AT1G66750	53.4	1.7e-62	237.3
Cma11g00298	CST	8	415	Core Cell Cycle Gene Families	AT1G18040	75.2	1.6e-173	606.3
Cma10g00319	CST	378	779	Core Cell Cycle Gene Families	AT1G18040	59.5	7.6e-120	427.9
Cma07g01287	.	20	484	Core Cell Cycle Gene Families	AT5G63610	77.7	1.9e-205	712.6
Cma05g01346	CST	1	481	Core Cell Cycle Gene Families	AT4G28980	61.8	2.3e-171	599.4
Cma12g01259	CST	1	482	Core Cell Cycle Gene Families	AT4G28980	58.6	5.6e-165	578.2
Cma15g00658	.	5	490	Core Cell Cycle Gene Families	AT1G44110	60.5	8.9e-152	534.3
Cma04g02383	.	5	405	Core Cell Cycle Gene Families	AT1G44110	59.8	1.2e-119	427.6
Cma17g00828	.	207	503	Core Cell Cycle Gene Families	AT1G44110	53.5	4.8e-89	325.9
Cma01g01526	.	203	470	Core Cell Cycle Gene Families	AT1G44110	57.5	3.4e-87	319.7
Cma09g00477	.	196	462	Core Cell Cycle Gene Families	AT1G44110	57.7	2.9e-86	316.6
Cma01g01803	CCT,CST,ECH	92	375	Core Cell Cycle Gene Families	AT1G44110	52.5	3.3e-82	303.1
Cma12g00577	CCT,CST,ECH	88	371	Core Cell Cycle Gene Families	AT1G44110	52.1	5.3e-80	295.8
Cma12g00306	.	180	451	Core Cell Cycle Gene Families	AT1G44110	50.9	2.8e-73	273.5
Cma01g01526	.	203	470	Core Cell Cycle Gene Families	AT1G77390	53.7	2.4e-77	287.0
Cma17g00828	.	225	499	Core Cell Cycle Gene Families	AT1G77390	52.0	6.9e-77	285.4
Cma09g00477	.	196	462	Core Cell Cycle Gene Families	AT1G77390	52.1	5.8e-76	282.3
Cma01g01803	CCT,CST,ECH	97	373	Core Cell Cycle Gene Families	AT1G77390	50.9	3.5e-73	273.1
Cma12g00306	.	180	442	Core Cell Cycle Gene Families	AT1G77390	50.4	4.2e-66	249.6
Cma09g00477	.	10	474	Core Cell Cycle Gene Families	AT5G25380	53.3	2.1e-118	423.3
Cma01g01526	.	15	481	Core Cell Cycle Gene Families	AT5G25380	53.2	2.0e-116	416.8
Cma17g00828	.	223	503	Core Cell Cycle Gene Families	AT5G25380	63.3	1.9e-98	357.1
Cma12g00306	.	9	440	Core Cell Cycle Gene Families	AT5G25380	51.6	1.9e-95	347.1
Cma15g00658	.	210	485	Core Cell Cycle Gene Families	AT5G25380	53.6	6.7e-80	295.4
Cma19g00567	CST	115	341	Core Cell Cycle Gene Families	AT5G25380	52.6	2.0e-60	230.7
Cma09g00477	.	44	412	Core Cell Cycle Gene Families	AT5G11300	56.9	1.6e-99	360.5
Cma12g00306	.	52	387	Core Cell Cycle Gene Families	AT5G11300	53.4	1.7e-77	287.3
Cma15g00658	.	210	430	Core Cell Cycle Gene Families	AT5G11300	56.1	2.7e-67	253.4
Cma04g02383	.	194	405	Core Cell Cycle Gene Families	AT5G11300	55.1	3.4e-62	236.5
Cma12g00577	CCT,CST,ECH	90	308	Core Cell Cycle Gene Families	AT5G11300	53.0	5.9e-62	235.7
Cma05g00158	CCT,CST,ECH	91	306	Core Cell Cycle Gene Families	AT5G11300	53.2	1.4e-60	231.1
Cma01g01803	CCT,CST,ECH	92	312	Core Cell Cycle Gene Families	AT5G11300	53.8	2.7e-59	226.9
Cma19g00567	CST	115	283	Core Cell Cycle Gene Families	AT5G11300	54.1	1.6e-46	184.5
Cma17g00828	.	157	503	Core Cell Cycle Gene Families	AT1G15570	60.7	2.4e-117	419.9
Cma01g01526	.	170	481	Core Cell Cycle Gene Families	AT1G15570	54.9	2.3e-96	350.1
Cma15g00658	.	194	489	Core Cell Cycle Gene Families	AT1G15570	51.8	2.0e-79	293.9
Cma05g00158	CCT,CST,ECH	82	361	Core Cell Cycle Gene Families	AT1G15570	50.7	3.5e-76	283.1
Cma12g00577	CCT,CST,ECH	76	360	Core Cell Cycle Gene Families	AT1G15570	50.5	1.0e-75	281.6
Cma19g00567	CST	118	338	Core Cell Cycle Gene Families	AT1G15570	52.7	2.5e-58	223.8
Cma17g00828	.	4	503	Core Cell Cycle Gene Families	AT1G80370	50.6	6.7e-115	411.8
Cma15g00658	.	211	490	Core Cell Cycle Gene Families	AT1G80370	54.6	2.4e-80	297.0
Cma12g00577	CCT,CST,ECH	63	368	Core Cell Cycle Gene Families	AT1G80370	50.2	3.2e-77	286.6
Cma05g00158	CCT,CST,ECH	91	369	Core Cell Cycle Gene Families	AT1G80370	52.3	2.7e-76	283.5
Cma04g02383	.	194	440	Core Cell Cycle Gene Families	AT1G80370	50.4	7.0e-64	242.3
Cma05g00158	CCT,CST,ECH	6	371	Core Cell Cycle Gene Families	AT5G43080	58.3	3.3e-114	409.1
Cma12g00577	CCT,CST,ECH	3	370	Core Cell Cycle Gene Families	AT5G43080	56.9	2.4e-109	392.9
Cma01g01803	CCT,CST,ECH	1	378	Core Cell Cycle Gene Families	AT5G43080	56.2	7.1e-109	391.3
Cma09g00270	CCT,CST,ECH	1	412	Core Cell Cycle Gene Families	AT5G43080	51.8	3.6e-105	379.0
Cma15g00658	.	212	491	Core Cell Cycle Gene Families	AT5G43080	52.5	2.0e-79	293.5
Cma09g00477	.	198	476	Core Cell Cycle Gene Families	AT5G43080	52.1	1.7e-78	290.4
Cma01g01526	.	205	471	Core Cell Cycle Gene Families	AT5G43080	54.7	2.5e-77	286.6
Cma12g00306	.	172	451	Core Cell Cycle Gene Families	AT5G43080	50.4	6.3e-73	271.9
Cma19g00567	CST	83	349	Core Cell Cycle Gene Families	AT5G43080	53.0	2.6e-71	266.5
Cma04g02383	.	197	398	Core Cell Cycle Gene Families	AT5G43080	54.4	2.2e-57	220.3
Cma05g00158	CCT,CST,ECH	1	371	Core Cell Cycle Gene Families	AT1G47210	58.7	7.8e-122	434.5
Cma12g00577	CCT,CST,ECH	1	370	Core Cell Cycle Gene Families	AT1G47210	58.1	2.6e-117	419.5
Cma01g01803	CCT,CST,ECH	1	378	Core Cell Cycle Gene Families	AT1G47210	53.8	2.3e-110	396.4
Cma01g01526	.	206	471	Core Cell Cycle Gene Families	AT1G47210	53.4	1.4e-75	280.8
Cma17g00828	.	226	498	Core Cell Cycle Gene Families	AT1G47210	50.7	1.2e-74	277.7
Cma19g00567	CST	83	349	Core Cell Cycle Gene Families	AT1G47210	50.7	3.3e-72	269.6
Cma04g02383	.	197	398	Core Cell Cycle Gene Families	AT1G47210	53.4	2.3e-57	220.3
Cma05g00158	CCT,CST,ECH	91	371	Core Cell Cycle Gene Families	AT1G47220	59.8	1.5e-92	337.0
Cma01g01803	CCT,CST,ECH	76	376	Core Cell Cycle Gene Families	AT1G47220	55.8	5.6e-92	335.1
Cma12g00577	CCT,CST,ECH	79	370	Core Cell Cycle Gene Families	AT1G47220	56.5	4.5e-89	325.5
Cma09g00270	CCT,CST,ECH	98	410	Core Cell Cycle Gene Families	AT1G47220	53.7	3.8e-88	322.4
Cma01g01526	.	205	471	Core Cell Cycle Gene Families	AT1G47220	51.7	3.6e-70	262.7
Cma04g02383	.	197	399	Core Cell Cycle Gene Families	AT1G47220	53.1	4.7e-54	209.1
Cma05g00158	CCT,CST,ECH	1	371	Core Cell Cycle Gene Families	AT1G47230	58.1	2.0e-117	419.9
Cma01g01803	CCT,CST,ECH	1	378	Core Cell Cycle Gene Families	AT1G47230	57.3	1.3e-116	417.2
Cma12g00577	CCT,CST,ECH	1	370	Core Cell Cycle Gene Families	AT1G47230	56.6	3.2e-112	402.5
Cma09g00270	CCT,CST,ECH	1	412	Core Cell Cycle Gene Families	AT1G47230	52.3	1.5e-109	393.7
Cma15g00658	.	213	494	Core Cell Cycle Gene Families	AT1G47230	50.9	1.7e-76	283.9
Cma19g00567	CST	65	349	Core Cell Cycle Gene Families	AT1G47230	50.9	1.1e-72	271.2
Cma17g00828	.	228	498	Core Cell Cycle Gene Families	AT1G47230	51.3	1.9e-72	270.4
Cma01g01526	.	206	471	Core Cell Cycle Gene Families	AT1G47230	52.0	1.2e-71	267.7
Cma09g00477	.	199	476	Core Cell Cycle Gene Families	AT1G47230	50.4	4.7e-71	265.8
Cma04g02383	.	198	398	Core Cell Cycle Gene Families	AT1G47230	54.9	1.9e-56	217.2
Cma07g01100	.	1	448	Core Cell Cycle Gene Families	AT4G37490	52.9	5.4e-111	398.7
Cma07g01102	.	1	464	Core Cell Cycle Gene Families	AT4G37490	50.8	1.1e-108	391.0
Cma07g01103	.	1	432	Core Cell Cycle Gene Families	AT4G37490	51.3	9.9e-105	377.9
Cma07g01101	.	1	223	Core Cell Cycle Gene Families	AT4G37490	59.1	2.7e-70	263.5
Cma07g01100	.	1	345	Core Cell Cycle Gene Families	AT5G06150	54.4	7.6e-84	308.1
Cma07g01102	.	1	346	Core Cell Cycle Gene Families	AT5G06150	53.0	3.5e-81	299.3
Cma07g01103	.	1	329	Core Cell Cycle Gene Families	AT5G06150	53.0	1.9e-74	276.9
Cma02g01292	.	113	305	Core Cell Cycle Gene Families	AT5G06150	64.4	7.4e-63	238.4
Cma07g00387	.	169	336	Core Cell Cycle Gene Families	AT5G06150	51.8	6.1e-41	165.6
Cma07g01101	.	1	120	Core Cell Cycle Gene Families	AT5G06150	69.2	1.4e-40	164.5
Cma07g01100	.	1	405	Core Cell Cycle Gene Families	AT3G11520	55.2	1.9e-102	370.2
Cma07g01102	.	29	406	Core Cell Cycle Gene Families	AT3G11520	56.9	7.1e-102	368.2
Cma07g01103	.	1	389	Core Cell Cycle Gene Families	AT3G11520	54.2	1.1e-94	344.4
Cma07g01101	.	1	180	Core Cell Cycle Gene Families	AT3G11520	66.7	2.4e-65	246.9
Cma03g00627	.	155	381	Core Cell Cycle Gene Families	AT3G11520	51.1	4.3e-59	226.1
Cma02g01292	.	14	404	Core Cell Cycle Gene Families	AT2G26760	55.9	5.4e-110	395.2
Cma07g01100	.	17	441	Core Cell Cycle Gene Families	AT2G26760	50.4	3.9e-100	362.5
Cma07g01101	.	1	216	Core Cell Cycle Gene Families	AT2G26760	63.0	8.2e-74	275.0
Cma07g00387	.	25	438	Core Cell Cycle Gene Families	AT2G17620	60.4	2.3e-125	446.4
Cma03g00627	.	32	424	Core Cell Cycle Gene Families	AT2G17620	61.6	1.8e-122	436.8
Cma01g02011	.	35	436	Core Cell Cycle Gene Families	AT2G17620	53.3	1.1e-108	391.0
Cma03g00627	.	28	381	Core Cell Cycle Gene Families	AT4G35620	60.7	7.5e-104	374.8
Cma07g00387	.	5	395	Core Cell Cycle Gene Families	AT4G35620	56.0	1.1e-102	370.9
Cma01g02011	.	35	391	Core Cell Cycle Gene Families	AT4G35620	53.2	2.6e-88	323.2
Cma01g02011	.	1	434	Core Cell Cycle Gene Families	AT1G20610	64.5	1.1e-143	507.3
Cma03g00627	.	1	424	Core Cell Cycle Gene Families	AT1G20610	54.8	1.5e-116	417.2
Cma07g00387	.	1	438	Core Cell Cycle Gene Families	AT1G20610	54.4	1.3e-115	414.1
Cma09g00055	.	2	205	Core Cell Cycle Gene Families	AT1G20610	55.5	1.0e-53	208.4
Cma01g02011	.	1	331	Core Cell Cycle Gene Families	AT1G76310	64.9	5.4e-106	381.7
Cma03g00627	.	1	320	Core Cell Cycle Gene Families	AT1G76310	52.6	2.4e-77	286.6
Cma09g00055	.	2	209	Core Cell Cycle Gene Families	AT1G76310	53.9	1.4e-53	207.6
Cma02g01292	.	138	306	Core Cell Cycle Gene Families	AT1G76310	53.2	2.7e-41	166.8
Cma07g01100	.	176	341	Core Cell Cycle Gene Families	AT1G76310	52.4	1.0e-40	164.9
Cma07g01102	.	177	342	Core Cell Cycle Gene Families	AT1G76310	51.8	5.2e-40	162.5
Cma19g01118	.	188	643	Core Cell Cycle Gene Families	AT1G16330	52.9	6.9e-118	422.2
Cma05g00923	.	1	325	Core Cell Cycle Gene Families	AT1G70210	64.8	1.4e-109	393.7
Cma04g00298	.	1	325	Core Cell Cycle Gene Families	AT1G70210	63.6	2.4e-106	382.9
Cma12g00720	.	1	323	Core Cell Cycle Gene Families	AT1G70210	60.5	1.5e-100	363.6
Cma04g01592	.	1	326	Core Cell Cycle Gene Families	AT1G70210	61.4	4.6e-97	352.1
Cma03g00834	.	58	320	Core Cell Cycle Gene Families	AT2G22490	54.6	2.2e-76	283.5
Cma07g00564	.	30	313	Core Cell Cycle Gene Families	AT2G22490	50.5	8.2e-76	281.6
Cma12g00720	.	38	230	Core Cell Cycle Gene Families	AT2G22490	50.3	4.8e-44	176.0
Cma04g00476	.	5	337	Core Cell Cycle Gene Families	AT4G34160	50.6	1.3e-76	284.3
Cma05g00163	CCT,CST,ECH	109	384	Core Cell Cycle Gene Families	AT4G34160	50.5	1.1e-67	254.6
Cma09g00261	CCT,CST,ECH	71	300	Core Cell Cycle Gene Families	AT4G34160	54.8	5.2e-65	245.7
Cma11g01728	CST	60	294	Core Cell Cycle Gene Families	AT4G34160	50.6	1.9e-59	227.3
Cma03g00834	.	52	255	Core Cell Cycle Gene Families	AT5G65420	64.3	2.5e-69	259.6
Cma07g00564	.	41	242	Core Cell Cycle Gene Families	AT5G65420	60.3	1.5e-61	233.8
Cma12g00214	.	59	251	Core Cell Cycle Gene Families	AT5G65420	55.6	1.2e-58	224.2
Cma05g00530	.	26	230	Core Cell Cycle Gene Families	AT5G65420	53.6	2.6e-58	223.0
Cma03g00834	.	52	231	Core Cell Cycle Gene Families	AT5G10440	58.6	1.7e-55	213.4
Cma07g00564	.	43	218	Core Cell Cycle Gene Families	AT5G10440	55.9	1.4e-49	193.7
Cma05g00530	.	21	199	Core Cell Cycle Gene Families	AT5G10440	52.2	5.3e-49	191.8
Cma12g00214	.	54	227	Core Cell Cycle Gene Families	AT5G10440	53.4	1.5e-48	190.3
Cma07g00729	.	1	274	Core Cell Cycle Gene Families	AT5G27620	66.1	4.6e-101	365.2
Cma02g01373	CCT	1	86	Core Cell Cycle Gene Families	AT2G27960	90.7	6.4e-43	170.2
Cma13g00263	CCT	1	86	Core Cell Cycle Gene Families	AT2G27960	89.5	1.9e-42	168.7
Cma20g00533	.	919	1003	Core Cell Cycle Gene Families	AT2G27960	89.4	5.1e-40	160.6
Cma02g01373	CCT	1	76	Core Cell Cycle Gene Families	AT2G27970	92.1	2.4e-39	158.3
Cma13g00263	CCT	1	83	Core Cell Cycle Gene Families	AT2G27970	83.1	3.5e-38	154.5
Cma18g00846	.	1	1019	Core Cell Cycle Gene Families	AT3G12280	72.3	0.0e+00	1417.9
Cma04g01316	.	4	1019	Core Cell Cycle Gene Families	AT3G12280	70.2	0.0e+00	1359.4
Cma08g00407	.	2	485	Core Cell Cycle Gene Families	AT1G02970	59.9	3.0e-161	565.8

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0012604	0	1	0	0	0	1	2	1	1	1	1	1	2	1	1	2	1	0	2	1	1	1	1	1	1	1	1	2	1	0	29

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Cma09g00261	Cma_Chr09	FPKM	1.036513	1.451148	0.682221	0.899524	24.874432	21.856503	23.427874	0.0	0.135282	0.0