Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00267 ATGCACCTGCAACAACTTCCAACATATTCATCCATGGAGGCTAACACGATTACATGCCTCTCTCTCTCGCTTCTCTTGACTCTTATTCTTATTTACAAACTCAGAAAACAAAGCCCCAGAAACCGTCCTCCCAGCCCACCATCGCTGCCTCTCATCGGCCACCTTCATCTCCTCAAACAACCTTTCCACAGAGTGCTGCAGGATCTCTCCAACAAACACGGTCCAATTTTATCCCTTTCAATCGGTTCCCGTCCGCTGGTGGTTATTTCCTCCCCAACCGCTGTCCGCGAGTGCTTTACCAAAAACGACATCGCCTTGGCCAACCGCCCTCGCTTGCTTGCTGGGAAGTACATGAACTACAACTACACCGGTGTGGCTTTTGCCTCCTACGGCCACCACTGGCGCAACATGCGCCGCATAGCCACCACAGAGCTACTCTCCAACCACCGCCTCAACGCGTATCTCAATATCCGAGTGCAAGAGCTGAAATTGGTCAAGAATTTGTACGGCGCGACAGGGGAAAGTAGTGATTTTGTTCGCTTGGAGATGCAGTCCAAATTGAACGAGCTTTCTTTTAATATTGTGATGAGGATGGTGAGTGGGAAACGTTACTTTGGTGTAGATGTTGAGGATGTTGAGGAAGCTAGGGAGTTTAGGGAGATCATGAAGGAGCTTCTTCAATTGGGCGGGGCGTCGAATCCAGCCGATTTTTTGCCCATTTTGAGACTCTTTGATTATCAAGGACTTGAGAAGAGGATGGTGCAAGCGAGTGGTCGAGCTGATTCGTTCCTACAAAATCTGATTGATTGCGAGCGGGATAGGCGAGCTTCTCGTTGGCCGGAGGAAAAACGTGGAAACAAGACCATGATTCAGAGCCTGCTGTCCTTGCAAGAATCTCAACCTCAACATTACTCCGATGATATCATCAAGGGTCATGTTCTGACGATGTTGGCTGCGGGTACGGATACAACTACAGGAACATTAGAATGGGCGATGTCGCTGCTTCTGAATCATCCCGCGATAATGAATAAAGCTTGGAGCGAGATAAGAGAGTGCGTTGGGGAGAGTCGGCTGGTGGAGGAAGGCGATGTGAGCAGCCTAAAATACTTGGTAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGCAGCTCCTCTGTTGGTGCCACACGAATCCTCTGAAGAGTGTAGAGTTGAAGGATTTGACATACCCAAAGGCACGATGCTATTGGTGAATGCATGGGCCATCCATAGGGACCCTCGAGTGTGGGAGGATCCCACTAGCTTCCGACCTGAGAGGTTTCTGAATTGGGAAACTGCTGAGTCCCACAAATGGGTGCCGTTTGGAGTGGGGAGGAGGGCTTGTCCTGGGGCTGCCCTCGCCCACCGTGTCGTGGGCTTGACGCTGGCCACTTTGATTCAGTGCTTTGAGTGGCAGAGAGTTGGCGAAGAGCCCATAGACTTGTCCCAGGGAACTGGAATCACTACGCCCAAAGCCATACCTTTGGAGGCAATGTGCAGAGCCCGTAGCTCCATGCTTCATTTACTCTCTCCGCTTTGA 1560 50.71 MHLQQLPTYSSMEANTITCLSLSLLLTLILIYKLRKQSPRNRPPSPPSLPLIGHLHLLKQPFHRVLQDLSNKHGPILSLSIGSRPLVVISSPTAVRECFTKNDIALANRPRLLAGKYMNYNYTGVAFASYGHHWRNMRRIATTELLSNHRLNAYLNIRVQELKLVKNLYGATGESSDFVRLEMQSKLNELSFNIVMRMVSGKRYFGVDVEDVEEAREFREIMKELLQLGGASNPADFLPILRLFDYQGLEKRMVQASGRADSFLQNLIDCERDRRASRWPEEKRGNKTMIQSLLSLQESQPQHYSDDIIKGHVLTMLAAGTDTTTGTLEWAMSLLLNHPAIMNKAWSEIRECVGESRLVEEGDVSSLKYLVAIIYETLRLFPAAPLLVPHESSEECRVEGFDIPKGTMLLVNAWAIHRDPRVWEDPTSFRPERFLNWETAESHKWVPFGVGRRACPGAALAHRVVGLTLATLIQCFEWQRVGEEPIDLSQGTGITTPKAIPLEAMCRARSSMLHLLSPL 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1109388 1111813 - CmaCh09G002670.1 Cma09g00267 300272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00267 519 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PANTHER CYTOCHROME P450 82C3-RELATED 36 514 - -
Cma09g00267 519 Gene3D Cytochrome P450 32 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 Pfam Cytochrome P450 43 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 SUPERFAMILY Cytochrome P450 43 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Cma09g00267 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00267 519 PANTHER - 36 514 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01805 Cma09g00267 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00267 Cma-Chr9:1109388 Cma17g01387 Cma-Chr17:9243802 0 dispersed
Cma09g00267 Cma-Chr9:1109388 Cma09g00271 Cma-Chr9:1122974 1.50E-169 proximal
Cma01g01805 Cma-Chr1:12029068 Cma09g00267 Cma-Chr9:1109388 0 transposed
Cma03g00950 Cma-Chr3:6782028 Cma09g00267 Cma-Chr9:1109388 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00267 K13260 - csv:101207002 742.265