Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g00270 | ATGGCGGACAAGGAGAATATATTTCGTCTCACTCGGGCTTCTAAGAAGAGGTTGGCCGAGGCTGCAACCCCCGACGACCGCTCCTCCAACAAGAGGCGGGTCGTTCTTGGAGAGCTTCCTATTTTACAGAATGCTTCTTCTTCCGTCAATCGGAAGTCCAGGTCTAGAGCTAGCAGGCAGAGACGGAGAGTGAAATCAAGGGATATTGCGGGGACAAGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGAAATCAATCCACTTCCGCAACGTGATGTCACGTTGTCAGATGAGGGCAATTCGGAAGACCCCCAAATGTGCAGGGGTTACGCCTCTGATATTTATGACTATCTTCGCGCAACGGAGACTGATCCAAGAAGAAGGCCCCTTCCAGATTACATCGGGACGGTACAAAAAGATATTAGTGCCAATATGAGGGGAATTCTGGTGGATTGGTTGGTTGAAGTTGCAGAAGAATACAAACTAGTTTCAGATACACTATACCTCTCTGTTTCATATGTTGACAGATACTTATCTCTAAATGCAATCAGCAGGCAAAAACTTCAGTTGGTGGGAGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATTAGTCCTCCACATGTTGAAGAATTTGTTTATATCACCGACAATACCTACAATAGGGAAGAGGTGGTTGAGATGGAGGCTGATATATTAAAATCACTGGAATTTGAACTTGGAGATCCCACAATAAAGACATTTTTAAGGCAAGTGCAGTGGTCTATCTTTTACTGTTGTAATTGTGAAAAATGTGCAGCACTTGCGTGGTTTGATAACTTATGGAGCATTATTCTAATGTGCAGGAGATTCACAATGGTTGCTCAAGAGACTTATGAGTTTAATACTTTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGCCTACTAGACTACAACTGTGTCAAATTTTTACCGTCTCTCGTTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAACCTAAGAAGCATCCTTGGATCTCCAGGTTGGAGCATTTTACTGGATATAAGCCAGCTGATATGAAAGACTGCATTCTACTCGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACACAAGTTCAAATTTGTGTGTGTCATGCCTTCACCTCCAGAGATTCCTATTCCATATTTTGAAGATGTTAGAATATGA | 1239 | 42.78 | MADKENIFRLTRASKKRLAEAATPDDRSSNKRRVVLGELPILQNASSSVNRKSRSRASRQRRRVKSRDIAGTSAAAAAAAAAAEINPLPQRDVTLSDEGNSEDPQMCRGYASDIYDYLRATETDPRRRPLPDYIGTVQKDISANMRGILVDWLVEVAEEYKLVSDTLYLSVSYVDRYLSLNAISRQKLQLVGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEADILKSLEFELGDPTIKTFLRQVQWSIFYCCNCEKCAALAWFDNLWSIILMCRRFTMVAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLVAASVIFLARFMIQPKKHPWISRLEHFTGYKPADMKDCILLVHDLYLSRRGGALAAIREKYKQHKFKFVCVMPSPPEIPIPYFEDVRI | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1114199 | 1116416 | - | CmaCh09G002700.1 | Cma09g00270 | 300275 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g00270 | 412 | PIRSF | Cyclin_A_B_D_E | 279 | 403 | IPR039361 | - | |
Cma09g00270 | 412 | PIRSF | Cyclin_A_B_D_E | 3 | 258 | IPR039361 | - | |
Cma09g00270 | 412 | Pfam | Cyclin, N-terminal domain | 113 | 241 | IPR006671 | - | |
Cma09g00270 | 412 | Gene3D | - | 113 | 393 | - | - | |
Cma09g00270 | 412 | PANTHER | CYCLINS | 280 | 410 | IPR039361 | - | |
Cma09g00270 | 412 | SMART | Cyclin_C_2 | 244 | 399 | IPR004367 | - | |
Cma09g00270 | 412 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cma09g00270 | 412 | Pfam | Cyclin, C-terminal domain | 283 | 398 | IPR004367 | - | |
Cma09g00270 | 412 | PANTHER | CYCLIN-A3-1-RELATED | 24 | 253 | - | - | |
Cma09g00270 | 412 | PANTHER | CYCLIN-A3-1-RELATED | 280 | 410 | - | - | |
Cma09g00270 | 412 | CDD | CYCLIN | 145 | 234 | IPR013763 | - | |
Cma09g00270 | 412 | SUPERFAMILY | Cyclin-like | 102 | 241 | IPR036915 | - | |
Cma09g00270 | 412 | SMART | cyclin_7 | 284 | 368 | IPR013763 | - | |
Cma09g00270 | 412 | SMART | cyclin_7 | 151 | 235 | IPR013763 | - | |
Cma09g00270 | 412 | CDD | CYCLIN | 301 | 367 | IPR013763 | - | |
Cma09g00270 | 412 | ProSitePatterns | Cyclins signature. | 146 | 177 | IPR006671 | - | |
Cma09g00270 | 412 | Gene3D | - | 127 | 242 | - | - | |
Cma09g00270 | 412 | PANTHER | CYCLINS | 24 | 253 | IPR039361 | - | |
Cma09g00270 | 412 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
Cma09g00270 | 412 | SUPERFAMILY | Cyclin-like | 284 | 401 | IPR036915 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma09g00270 | Cma12g00577 | CCT | |
Cma05g00158 | Cma09g00270 | CCT | |
Cma09g00270 | Cma12g00577 | ECH | |
Cma05g00158 | Cma09g00270 | ECH | |
Cma01g01803 | Cma09g00270 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma09g00270 | Cma-Chr9:1114199 | Cma15g00658 | Cma-Chr15:3138809 | 2.37E-97 | dispersed | |
Cma01g01803 | Cma-Chr1:12023071 | Cma09g00270 | Cma-Chr9:1114199 | 0 | wgd | |
Cma11g01716 | Cma-Chr11:11366810 | Cma09g00270 | Cma-Chr9:1114199 | 9.83E-105 | wgd | |
Cma12g00577 | Cma-Chr12:3019501 | Cma09g00270 | Cma-Chr9:1114199 | 7.54E-153 | wgd | |
Cma19g00567 | Cma-Chr19:6402662 | Cma09g00270 | Cma-Chr9:1114199 | 1.16E-95 | wgd | |
Cma05g00158 | Cma-Chr5:686175 | Cma09g00270 | Cma-Chr9:1114199 | 3.06E-160 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g00270 | K06627 | - | csv:101207493 | 633.639 |