Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g00290 | ATGGAAAATTATTTGAACGAGAATTTCGGTGAAGTGAAGCCGAAGAACTCGTCGGAAGAAGCGCTTCAGAGATGGAGGCAGCTTTGCTGGTTGGTGAAGAATCGGAAACGGAGGTTTCGATTTACTGCCAATCTATCTAAACGATTTGAGGCCGATGCTATTAGACGCTCCAATCAGGAGAAGTTTAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTCTCCTGACTACGTTGTGCCTGAAGAGGTCAGGCAAGCAGGTTTTGAAATCTGTGCAGATGAAGCGGGCTCCATTGTTGATGGACATGACGTGAAGAAGCTGAAGATTCATGGGGGTGCTGAGGGTATTGCAACTAAGCTTGGCACATCAACAGAGACAGGCATTCCTACTACAGACCATTTGATCAAGAAAAGACAACACATTTATGGAATTAACAAATTCACCGAAAGCCCACATCGAGGATTTTGGCTCTTTGTTTGGGAAGCTCTCCAGGATACGACCCTAATGATACTCGCTTTCTGTTCTGTTGTTTCCCTTTTTGTTGGCATAGTGATGGAAGGATGGCCAAAGGGTGCTCATGATGGGCTTGGCATTGTTGCGAGTATCTTGCTTGTTGTATTTGTCACTGCCACCAGTGACTATAGGCAATCGCTTCAGTTCATGGATTTGGACAGGGAAAAGAAGAAAATTTCGGTTCAGGTTACCAGAAATGGGCTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCGTGGGTGATCAGGTACCAGCAGATGGACTTTTCGTTTCGGGGTATTCTCTTCTGATAAATGAATCTAGCTTAACAGGTGAGAGCGAACCTGTTAACGTAAGTTCTCAAAATCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAAGATGGTTGTGACTTCTGTTGGCATGAGAACCCAATGGGGCAAACTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAGACTCCTTTGCAGGTAAAGCTCAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGATTGTTCACTCGCAAGCTACAAGAAGGGTCTTACTTGAGCTGGTCCGGAGATGAAGCAATGGAAGTTTTGGAATTCTTTGCTGTCGCCGTAACTATTGTTGTGGTTGCAGTGCCTGAAGGGCTGCCTTTGGCAGTGACACTGAGCCTTGCTTTTGCCATGAAAAAGATGATGAACGATAAGGCACTTGTCAGGAACTTGGCTGCTTGTGAGACAATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATATGCAGCAAGGTCAAGGAAGTTAGTAATTCTAGCAAATGTTCCGATTATCGTTCAGAGCTTCCCGATTTCGCTGTTGATATTTTACTACAATCAATATTTAACAACACTGGTGGAGAAGTCGTCAAGAACAAAGATGGCAAGAATGAGATACTTGGGACGCCCACGGAGTCTGCTCTACTGGAATTCGGCCTTCTGCTTGGTGGGGATTTCCAAGAAGAACGCCAAAAGTCAAAAATCGCGAGAGTCGAGCCCTTCAATTCTGTGAAGAAGCGAATGGGGGTTGTTTTGGAGCTCCCGGCCGGTGGCTTCCGCGCGCACAGCAAAGGAGCATCAGAGATAGTTTTAGCTTCATGCGATAAAGTTCTCGACTCGAACGGTGAAGCAATTCTTCTCAATGAAGAGTCCACCGACTTTTTGAAGGAAACCATCGAAGAATTTGCGGGTGAAGCTCTTCGAACTTTGTGCCTGGCTTATATGGACATTGAAGGCGAGTACAAGTCTGAAAGTACGATTCCCGCTAGTGGCTACACGTGCATAGGAATTGTTGGTATCAAGGATCCCGTTCGTCCGGGTGTTAAGGAGTCAGTTGCAATTTGCAAGGCCGCCGGTATTACCGTGAGGATGGTTACGGGAGATAACATCACCACCGCCAAAGCAATTGCCAGGGAATGTGGGATTTTGACTGACGATGGTATAGCAATTGAAGGTCCTGAATTCCGGGAGAAAAAGGAGGAAGAATTGAGTGAAATAGTACCAAAAATTCAGGTTATGGCTCGATCTTCACCAATGGATAAACATACCCTTGTAAAGCACTTACGAACCACTTTTCAAGAAGTCGTTGCAGTTACAGGGGATGGAACAAATGATGCTCCGGCACTCCACGAAGCAGATATTGGATTAGCTATGGGCATTGCTGGAACTGAGGTTGCAAAAGAGAGTGCTGATGTAATAATTCTTGACGACAACTTCTCTACAATTGCTACTGTTGCCAAATGGGGGCGTTCAGTCTACATAAATATCCAAAAGTTTGTCCAGTTTCAGCTAACAGTGAACGTGGTTGCACTTCTTGTCAATTTTTCTTCAGCCTGTTTGACAGGAACTGCTCCCCTCACTGCTGTGCAACTGCTTTGGGTCAACATGATAATGGACACACTCGGAGCACTTGCATTGGCAACTGAGCCTCCTACTGATGACTTGATGAAGAGACTGCCAGTTGGTCGGAAAGGAAATTTCATTAGCAATGTGATGTGGAGAAATATATTAGGGCAGTCATTATATCAGTTTGTTATAGTTTGGTATCTCCAAACAAGAGGACAGGCTCTTTTTCATCTTGATGGCCCAGACTCTGGATTGATATTGAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGGTAAGCTCAAGAGACATGGAAAAGATAAATGTGTTTGAAGGAATATTGAAGAACTACGTGTTTGTGGTAGTGCTTGCTTGCACTGTCCTTTTCCAGATCATTATCATCCAATACCTGGGAACATTTGCGAACACCTATCCTCTTAACTTCCAGCAATGGTTTGTCACCGTGTTATTTGGATTTCTTGGCATGCCGATTGCAGCAGCTTTGAAGATGATTCCGGTAGGATCAGACTGA | 3063 | 44.43 | MENYLNENFGEVKPKNSSEEALQRWRQLCWLVKNRKRRFRFTANLSKRFEADAIRRSNQEKFRVAVLVSQAALQFINGLDLSPDYVVPEEVRQAGFEICADEAGSIVDGHDVKKLKIHGGAEGIATKLGTSTETGIPTTDHLIKKRQHIYGINKFTESPHRGFWLFVWEALQDTTLMILAFCSVVSLFVGIVMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFMDLDREKKKISVQVTRNGLRQKISIYELLPGDIVHLAVGDQVPADGLFVSGYSLLINESSLTGESEPVNVSSQNPFLLSGTKVQDGSCKMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLQEGSYLSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICSKVKEVSNSSKCSDYRSELPDFAVDILLQSIFNNTGGEVVKNKDGKNEILGTPTESALLEFGLLLGGDFQEERQKSKIARVEPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKVLDSNGEAILLNEESTDFLKETIEEFAGEALRTLCLAYMDIEGEYKSESTIPASGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKKEEELSEIVPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNILGQSLYQFVIVWYLQTRGQALFHLDGPDSGLILNTLIFNAFVFCQVFNEVSSRDMEKINVFEGILKNYVFVVVLACTVLFQIIIIQYLGTFANTYPLNFQQWFVTVLFGFLGMPIAAALKMIPVGSD | 1020 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1192471 | 1197514 | - | CmaCh09G002900.1 | Cma09g00290 | 300295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g00290 | 1020 | Gene3D | - | 464 | 660 | IPR023299 | GO:0000166 | |
Cma09g00290 | 1020 | Pfam | Cation transport ATPase (P-type) | 515 | 594 | - | - | |
Cma09g00290 | 1020 | Gene3D | - | 17 | 77 | - | - | |
Cma09g00290 | 1020 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 1016 | IPR023298 | - | |
Cma09g00290 | 1020 | CDD | P-type_ATPase_Ca_PMCA-like | 145 | 889 | - | - | |
Cma09g00290 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 612 | 630 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 756 | 772 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | PRINTS | H+-transporting ATPase (proton pump) signature | 788 | 813 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 460 | 665 | IPR023299 | GO:0000166 | |
Cma09g00290 | 1020 | Gene3D | - | 169 | 1015 | - | - | |
Cma09g00290 | 1020 | Gene3D | - | 451 | 801 | IPR023214 | - | |
Cma09g00290 | 1020 | SMART | Cation_ATPase_N_a_2 | 120 | 191 | IPR004014 | - | |
Cma09g00290 | 1020 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 550 | 701 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 206 | 377 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 392 | 477 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 722 | 839 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma09g00290 | 1020 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 1017 | - | - | |
Cma09g00290 | 1020 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
Cma09g00290 | 1020 | Gene3D | - | 142 | 337 | - | - | |
Cma09g00290 | 1020 | Pfam | haloacid dehalogenase-like hydrolase | 740 | 800 | - | - | |
Cma09g00290 | 1020 | SFLD | C1.7: P-type atpase like | 436 | 808 | - | - | |
Cma09g00290 | 1020 | SFLD | p-type atpase | 436 | 808 | IPR044492 | - | |
Cma09g00290 | 1020 | Pfam | Cation transporter/ATPase, N-terminus | 119 | 186 | IPR004014 | - | |
Cma09g00290 | 1020 | SUPERFAMILY | HAD-like | 452 | 861 | IPR036412 | - | |
Cma09g00290 | 1020 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
Cma09g00290 | 1020 | Pfam | Cation transporting ATPase, C-terminus | 841 | 1015 | IPR006068 | - | |
Cma09g00290 | 1020 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 1017 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 285 | 299 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 454 | 468 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 653 | 664 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 675 | 685 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 756 | 775 | - | - | |
Cma09g00290 | 1020 | PRINTS | P-type cation-transporting ATPase superfamily signature | 780 | 792 | - | - | |
Cma09g00290 | 1020 | Pfam | E1-E2 ATPase | 237 | 432 | - | - | |
Cma09g00290 | 1020 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 334 | IPR008250 | - | |
Cma09g00290 | 1020 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 108 | 1017 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01785 | Cma09g00290 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma09g00290 | Cma-Chr9:1192471 | Cma14g00550 | Cma-Chr14:2735274 | 0 | dispersed | |
Cma12g01093 | Cma-Chr12:8619262 | Cma09g00290 | Cma-Chr9:1192471 | 4.36E-17 | dispersed | |
Cma15g00783 | Cma-Chr15:3900023 | Cma09g00290 | Cma-Chr9:1192471 | 0 | transposed | |
Cma01g01785 | Cma-Chr1:11948321 | Cma09g00290 | Cma-Chr9:1192471 | 0 | wgd | |
Cma03g00914 | Cma-Chr3:6618043 | Cma09g00290 | Cma-Chr9:1192471 | 0 | wgd | |
Cma07g00648 | Cma-Chr7:2816696 | Cma09g00290 | Cma-Chr9:1192471 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g00290 | K01537 | - | csv:101221694 | 1866.28 |